G2105402


Basic Information

Item Value
gene id G2105402
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 11472360 ~ 11473411 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2408108
acattttagagtggtattttattgtccccagtacaagttacacctgtgtaatgatcatgctgtttaatcagcttactgatatgccacacctgtcagttgcatggattatcttggcagaggagaaatgctcactaacatttaacatttgagagaaataagcttttgtgcttacagaacatttctgggaactttaatttcagcttatgaaacatcggaccaacactttgcatgttgcgtttatatttttgttcggtatagttcagttaccttcgctttcttgggtacaggaacaatggtggatatcttgaagcaagtggggacagaaGATGGTGTCCTTTGGTTGTGTATCTGGCTCCTCAATTGTATACCTCTTTACGAATGTTGTATAACTTGAATACCTGGCTCCGGTTGGAGATTGAACAACCACATTGTTTCCTTCTTTATTGATCACAGTGTGAGGTATCTTGTTGAAAGTTGTTGTGAACTTGTCTGTTTTGTCCTGTTCTAGGAGAACCTGGTCTCCTCAGAGTGTTTGGCTCTGCGATGGTTGTAGATCTTGGATTTACATTTCTGCTCAGCATCATAGTGTCTCCAGGTCACTCTGTGGTGTAGctacagtttacatacacttaggttggagtcattaaaactcgtttttcaaccactccacaaatttcttgctaacaaactatagttttggcaagtcggttaggacatctgctttgtgcatgacacaagtcatttttccaacaattgtttacagacagattatttcacttataattcactgtatcacaattccagtgtgtctgaagtttacatacactaagttgactgtgcctttaaacagcttggaaaattccagaaaatgctgtttgcaactgcacatggggacaaagatcatactttttggagaaatgtcctctggtctgatgaaacaaaaatagaactgtttcgttatgtttggaggaaaaagggggaggcttgcaagccaaagaataacatcccaaccgtgaagcacgggggtggcagcataatgttgttggggggct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2408108 True 1052 lncRNA 0.40 1 11472360 11473411

Neighbor

gene id symbol gene type direction distance location
LOC110508539 NA coding downstream 8282 11459373 ~ 11464078 (-)
LOC110508163 LOC106569415 coding downstream 327122 11143483 ~ 11145238 (-)
LOC110508530 jun coding downstream 380535 11089516 ~ 11091825 (-)
LOC110508529 LOC106569411 coding downstream 409181 11037198 ~ 11063179 (-)
LOC118944867 NA coding downstream 443933 11027041 ~ 11028427 (-)
LOC110508543 LOC106600422 coding upstream 42143 11515554 ~ 11518446 (-)
LOC110508547 pter coding upstream 83180 11556591 ~ 11572467 (-)
LOC110508549 LOC106600425 coding upstream 116697 11590108 ~ 11631741 (-)
LOC110508552 cables1 coding upstream 280664 11754075 ~ 11786100 (-)
gata6 LOC106600428 coding upstream 363236 11836647 ~ 11843807 (-)
G2105390 NA non-coding downstream 14547 11457565 ~ 11457813 (-)
G2105389 NA non-coding downstream 14876 11457278 ~ 11457484 (-)
G2105385 NA non-coding downstream 21232 11450320 ~ 11451128 (-)
G2105384 NA non-coding downstream 22935 11447528 ~ 11449425 (-)
G2105392 LOC106600420 non-coding upstream 15365 11488776 ~ 11490190 (-)
G2105446 NA non-coding upstream 53473 11526884 ~ 11527168 (-)
G2105437 LOC106600424 non-coding upstream 64471 11537882 ~ 11546473 (-)
G2105456 NA non-coding upstream 73886 11547297 ~ 11547497 (-)
G2105462 NA non-coding upstream 98131 11571542 ~ 11647115 (-)
LOC110508522 NA other downstream 578280 10886198 ~ 10894141 (-)
G2103920 NA other downstream 763861 10708012 ~ 10708499 (-)
G2103257 NA other downstream 1265684 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 1356963 10113428 ~ 10115397 (-)
LOC110508476 LOC106600265 other downstream 1464457 10004226 ~ 10007929 (-)
G2105419 LOC104953893 other upstream 25715 11499126 ~ 11500072 (-)
G2109663 LOC106599735 other upstream 4066357 15539768 ~ 15554897 (-)
G2109705 NA other upstream 4130274 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 4229925 15703333 ~ 15793545 (-)
G2110939 NA other upstream 5325979 16799390 ~ 16799869 (-)

Expression


Co-expression Network