G2110531


Basic Information

Item Value
gene id G2110531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 16479800 ~ 16517301 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2413666
cgcacacacacacgcacacacacacccgcacacacacacgcacacacacacgcaagggAGGAAGATCTGTTTGTACCACTCACTAACGGGACTCCAGGGCAGGGCAACACACGCACCTATACATACCCCCGCCACCACATTATTATTTTAAAGTAAAATTCTGAacattacatacaccttagccaaatacatttcaactcagtttttcactattcctgacatttaaaccaagtaaaaattccctgtcttaggtcagttaggatcaccactttattttaagaatgtgaaatgtcagaataagagtagagaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2413666 True 311 lncRNA 0.42 2 16479800 16517301

Neighbor

gene id symbol gene type direction distance location
LOC110508172 NA coding upstream 183521 16295344 ~ 16296279 (+)
LOC110508638 LOC106599708 coding upstream 286673 16170026 ~ 16193127 (+)
LOC110508636 tbb2a coding upstream 340048 16133508 ~ 16139752 (+)
LOC110508635 LOC106599714 coding upstream 347237 16073550 ~ 16132563 (+)
LOC110508631 igfbp-1b2 coding upstream 576139 15900655 ~ 15903661 (+)
LOC110508278 LOC106599701 coding downstream 292170 16809471 ~ 16813125 (+)
LOC110508640 LOC106599692 coding downstream 306958 16824259 ~ 16839283 (+)
ss18 ss18 coding downstream 384590 16901891 ~ 16921869 (+)
LOC110508645 LOC106599680 coding downstream 493224 17010525 ~ 17154942 (+)
LOC110508175 LOC106599673 coding downstream 679433 17196734 ~ 17236598 (+)
G2110502 NA non-coding upstream 34177 16445264 ~ 16445623 (+)
G2110495 NA non-coding upstream 38443 16441140 ~ 16441357 (+)
G2110432 NA non-coding upstream 77079 16402483 ~ 16402721 (+)
G2110278 NA non-coding upstream 209187 16270399 ~ 16270613 (+)
G2110101 LOC106599711 non-coding upstream 334591 16143168 ~ 16145209 (+)
G2110569 NA non-coding downstream 40120 16557421 ~ 16557625 (+)
G2110575 NA non-coding downstream 46104 16563405 ~ 16563829 (+)
G2110881 NA non-coding downstream 240391 16757692 ~ 16757929 (+)
G2110890 NA non-coding downstream 248894 16766195 ~ 16766395 (+)
G2110892 NA non-coding downstream 249693 16766994 ~ 16767283 (+)
G2110507 LOC107717027 other upstream 31298 16448112 ~ 16448502 (+)
G2109955 LOC106599720 other upstream 530939 15948308 ~ 15948861 (+)
G2109948 NA other upstream 540943 15938511 ~ 15938857 (+)
G2107033 NA other upstream 2566573 13911427 ~ 13913227 (+)
G2106557 NA other upstream 3336205 13143313 ~ 13143595 (+)
G2111044 NA other downstream 436483 16953784 ~ 16958852 (+)
G2111300 NA other downstream 893843 17411144 ~ 17416232 (+)
G2111457 NA other downstream 1190955 17708256 ~ 17708629 (+)
G2111491 NA other downstream 1237636 17754937 ~ 17755581 (+)

Expression


Co-expression Network