G2109955 (LOC106599720)


Basic Information

Item Value
gene id G2109955
gene name LOC106599720
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 15948308 ~ 15948861 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2413068
GGTGAAGCGGTGCCCGGCATCTGTGCAGAGGCTGAGAGATCCGGCAGGATGTTGGGAAATGGGATACTGAGGGAGCTTCCGCTATGTGGGCTGGAGAATCCGCTAGGGGCTGGGGAGGCTGTGCCCAAGGAGTGCTCCCCGTCCGACTCCCTCCTCTTCTCAGGCAGCAGTGGAGGCAAGGCCCCCTGGGCCTGGAGCTGCTGCAGCTGTGGCAGGTGCTGGGTCCGGATGGTGCCCAGCCCATCCATGGAACCCATACAGGACAGGCCCCTCTCCATGCCTCCATTCCCCagaagaggagaggcagagggtgGGCTGTCGACTGCGCCATAGCCCCCCAGGCCTAAGTTGTCTTGCTCGTCGAAGCTGTGCGCAAGGCTGTGGGTGAGGCCATAGTGTGCCATGTGGCTCTGCTGGCTGCCCCGGGGGGAGCTGTGGGCGTTGGGCGCAGGGTGAGTGTGGGGTTGGGGGTGCATGGGAGGGGAGTGGTGGCTGTAGTCCAAGGACATGGAGTGGGGATGGAGGGCTCTGTCTTCTGGCCAGGGCTGACCCAT

Function

NR:

description
tensin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2413068 True 554 TUCP 0.65 1 15948308 15948861

Neighbor

gene id symbol gene type direction distance location
LOC110508631 igfbp-1b2 coding upstream 44647 15900655 ~ 15903661 (+)
LOC110508629 LOC106599721 coding upstream 52140 15831164 ~ 15896168 (+)
LOC110508628 LOC106599723 coding upstream 146952 15793809 ~ 15801356 (+)
LOC110508625 LOC106599735 coding upstream 407643 15519330 ~ 15540665 (+)
LOC118944875 NA coding upstream 596260 15351371 ~ 15352048 (+)
LOC110508635 LOC106599714 coding downstream 124689 16073550 ~ 16132563 (+)
LOC110508636 tbb2a coding downstream 184647 16133508 ~ 16139752 (+)
LOC110508638 LOC106599708 coding downstream 221165 16170026 ~ 16193127 (+)
LOC110508172 NA coding downstream 346483 16295344 ~ 16296279 (+)
LOC110508639 LOC106599706 coding downstream 509351 16458212 ~ 16541579 (+)
G2109952 NA non-coding upstream 2890 15945061 ~ 15945418 (+)
G2109951 NA non-coding upstream 3431 15944467 ~ 15944877 (+)
G2109937 NA non-coding upstream 4459 15943363 ~ 15943849 (+)
G2109936 NA non-coding upstream 7420 15940588 ~ 15940888 (+)
G2109950 NA non-coding upstream 7954 15940129 ~ 15940354 (+)
G2109958 NA non-coding downstream 2827 15951688 ~ 15952008 (+)
G2109961 NA non-coding downstream 7627 15956488 ~ 15956724 (+)
G2109964 NA non-coding downstream 10545 15959406 ~ 15959688 (+)
G2109967 NA non-coding downstream 17611 15966472 ~ 15966777 (+)
G2109968 NA non-coding downstream 18930 15967791 ~ 15968003 (+)
G2109948 NA other upstream 9451 15938511 ~ 15938857 (+)
G2107033 NA other upstream 2035081 13911427 ~ 13913227 (+)
G2106557 NA other upstream 2804713 13143313 ~ 13143595 (+)
G2106549 NA other upstream 2813823 13133894 ~ 13134485 (+)
G2106548 NA other upstream 2814547 13133399 ~ 13133761 (+)
G2110507 LOC107717027 other downstream 499251 16448112 ~ 16448502 (+)
LOC110508278 LOC106599701 other downstream 863733 16809471 ~ 16813125 (+)
G2111044 NA other downstream 1004923 16953784 ~ 16958852 (+)
G2111300 NA other downstream 1462283 17411144 ~ 17416232 (+)
G2111457 NA other downstream 1759395 17708256 ~ 17708629 (+)

Expression


Co-expression Network