G2106548


Basic Information

Item Value
gene id G2106548
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 13133399 ~ 13133761 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2409340
TCAGCTGTAGTATGTCATAGTATATTTCACCGTAAGACCAGGCCTTTGCAAAAACAATAACTAACTtactgacaaacaaacaaacctttGACGTTGAGCATGGCGGAGGTCGCTGCGGTGCCCGCCTGGAAGGTCACTTTGCAGTTGTCCCCGACGTGCAGGTCCTTTAGCAGCAGCAGGTGGCGGCGGCCACTCTCGAAGGACACAATCTCAGTGGTTGGCGAATCCTTCACCGGCTTGCCGTCAATGAGCCAGCAGCTGTCTTTGATCTCGCAACGAGAGATCGAGCACTCGAACAGGGCCTCGCCGCCGTCGATGGTGTCCATGTTCTCCAGGCCCTGGAGGATTTCAATGGGTTTGGCT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2409340 True 363 TUCP 0.54 1 13133399 13133761

Neighbor

gene id symbol gene type direction distance location
LOC110508581 kgua coding upstream 31068 13080598 ~ 13102331 (+)
LOC110508579 arf1 coding upstream 67692 13060580 ~ 13065707 (+)
LOC110508578 LOC106599872 coding upstream 123022 12981805 ~ 13010377 (+)
LOC110508574 LOC106599880 coding upstream 377013 12749686 ~ 12756386 (+)
LOC110508573 LOC106599884 coding upstream 399859 12706958 ~ 12733540 (+)
LOC100136204 LOC100136204 coding downstream 84236 13217997 ~ 13219450 (+)
LOC118944853 LOC100136204 coding downstream 91632 13225393 ~ 13226868 (+)
LOC110508587 LOC106599852 coding downstream 128368 13262129 ~ 13268809 (+)
LOC118944822 NA coding downstream 131447 13265208 ~ 13266471 (+)
LOC110508586 LOC106599847 coding downstream 136377 13270138 ~ 13284487 (+)
G2106547 NA non-coding upstream 58 13132972 ~ 13133341 (+)
G2106544 NA non-coding upstream 5474 13127482 ~ 13127925 (+)
G2106542 NA non-coding upstream 6859 13125205 ~ 13126540 (+)
G2106530 NA non-coding upstream 20965 13111499 ~ 13112434 (+)
G2106529 NA non-coding upstream 22155 13110738 ~ 13111244 (+)
G2106551 NA non-coding downstream 3435 13137196 ~ 13137596 (+)
G2106552 LOC106599860 non-coding downstream 3870 13137631 ~ 13138106 (+)
G2106555 LOC106599860 non-coding downstream 5616 13139377 ~ 13140267 (+)
G2106558 NA non-coding downstream 20836 13154597 ~ 13160762 (+)
G2106569 NA non-coding downstream 31971 13165732 ~ 13166094 (+)
G2106543 NA other upstream 6168 13126962 ~ 13127231 (+)
G2106278 NA other upstream 288495 12844387 ~ 12844904 (+)
G2104555 NA other upstream 1200307 11889116 ~ 11933092 (+)
LOC110508540 LOC106600420 other upstream 1642564 11488248 ~ 11491159 (+)
G2103533 LOC105021892 other upstream 2380439 10713576 ~ 10752960 (+)
G2106549 NA other downstream 133 13133894 ~ 13134485 (+)
G2106557 NA other downstream 9552 13143313 ~ 13143595 (+)
G2107033 NA other downstream 777666 13911427 ~ 13913227 (+)
G2109948 NA other downstream 2804750 15938511 ~ 15938857 (+)
G2109955 LOC106599720 other downstream 2814547 15948308 ~ 15948861 (+)

Expression


Co-expression Network