G2109952


Basic Information

Item Value
gene id G2109952
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 15945061 ~ 15945418 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2413065
GATATCAGGCTTGTACCAGAATTTCGATGTGTCTTGCACAAAGTTTACAGTCACATGCTTGCTGGCCAGGACATCTGGAAAAACAGTATCACAAACACACCAGAGGTTAGTCAATGCACAAAGACCTCAGGCATTCAATCACTGTAACCAAGTTCAAAAGACATCCATATGTGGCTAATCCGAATTGACCAAGAAAGCCCACCTAAaggatacagtacatacagtctCAAGaagaagtatgtgaaccctttggaattacctggatttctgcataaatttgtcataaaatttgatcACAATggacaaacagtgtgcttaaactaataacacacaaagtaTTATATTTCTTGTccatatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2413065 True 358 lncRNA 0.38 1 15945061 15945418

Neighbor

gene id symbol gene type direction distance location
LOC110508631 igfbp-1b2 coding upstream 41400 15900655 ~ 15903661 (+)
LOC110508629 LOC106599721 coding upstream 48893 15831164 ~ 15896168 (+)
LOC110508628 LOC106599723 coding upstream 143705 15793809 ~ 15801356 (+)
LOC110508625 LOC106599735 coding upstream 404396 15519330 ~ 15540665 (+)
LOC118944875 NA coding upstream 593013 15351371 ~ 15352048 (+)
LOC110508635 LOC106599714 coding downstream 128132 16073550 ~ 16132563 (+)
LOC110508636 tbb2a coding downstream 188090 16133508 ~ 16139752 (+)
LOC110508638 LOC106599708 coding downstream 224608 16170026 ~ 16193127 (+)
LOC110508172 NA coding downstream 349926 16295344 ~ 16296279 (+)
LOC110508639 LOC106599706 coding downstream 512794 16458212 ~ 16541579 (+)
G2109951 NA non-coding upstream 184 15944467 ~ 15944877 (+)
G2109937 NA non-coding upstream 1212 15943363 ~ 15943849 (+)
G2109936 NA non-coding upstream 4173 15940588 ~ 15940888 (+)
G2109950 NA non-coding upstream 4707 15940129 ~ 15940354 (+)
G2109949 NA non-coding upstream 5141 15939561 ~ 15939920 (+)
G2109958 NA non-coding downstream 6270 15951688 ~ 15952008 (+)
G2109961 NA non-coding downstream 11070 15956488 ~ 15956724 (+)
G2109964 NA non-coding downstream 13988 15959406 ~ 15959688 (+)
G2109967 NA non-coding downstream 21054 15966472 ~ 15966777 (+)
G2109968 NA non-coding downstream 22373 15967791 ~ 15968003 (+)
G2109948 NA other upstream 6204 15938511 ~ 15938857 (+)
G2107033 NA other upstream 2031834 13911427 ~ 13913227 (+)
G2106557 NA other upstream 2801466 13143313 ~ 13143595 (+)
G2106549 NA other upstream 2810576 13133894 ~ 13134485 (+)
G2106548 NA other upstream 2811300 13133399 ~ 13133761 (+)
G2109955 LOC106599720 other downstream 2890 15948308 ~ 15948861 (+)
G2110507 LOC107717027 other downstream 502694 16448112 ~ 16448502 (+)
LOC110508278 LOC106599701 other downstream 867176 16809471 ~ 16813125 (+)
G2111044 NA other downstream 1008366 16953784 ~ 16958852 (+)
G2111300 NA other downstream 1465726 17411144 ~ 17416232 (+)

Expression


Co-expression Network