G2113580


Basic Information

Item Value
gene id G2113580
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19078098 ~ 19078350 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2416975
cagcaacagtgtgtgaaaaccttgtgaagacttacagaaaacgtttgacctctgtcattgccaacaaagggtatataacaaagtattgagataaacttttgttattgaccaaatacttatttcccaccataatttgcaaataaattcattgaaaatcctacaatgtgattttctggattttttttctcattttgtctatcatagttgaagtgtacctatgttgaaaattacagccctctctcatctttttaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2416975 True 253 lncRNA 0.32 1 19078098 19078350

Neighbor

gene id symbol gene type direction distance location
LOC110508675 LOC106599295 coding upstream 66457 18986697 ~ 19011641 (+)
LOC110508672 NA coding upstream 212684 18849186 ~ 18865414 (+)
LOC110508669 LOC106599285 coding upstream 261512 18726254 ~ 18816586 (+)
LOC110508668 LOC106599284 coding upstream 353927 18673302 ~ 18724171 (+)
LOC110508667 LOC106599281 coding upstream 419538 18579463 ~ 18658560 (+)
LOC110508679 LOC106599305 coding downstream 127022 19205372 ~ 19209070 (+)
LOC110508681 LOC106599307 coding downstream 139131 19217481 ~ 19322102 (+)
LOC110508686 LOC106599593 coding downstream 293659 19372009 ~ 19374568 (+)
LOC110508689 LOC106599321 coding downstream 361275 19439625 ~ 19458620 (+)
LOC118944897 NA coding downstream 372508 19450858 ~ 19450910 (+)
G2113576 NA non-coding upstream 4434 19073445 ~ 19073664 (+)
G2113575 NA non-coding upstream 5363 19072496 ~ 19072735 (+)
G2113571 NA non-coding upstream 8287 19067782 ~ 19069811 (+)
G2113553 NA non-coding upstream 24498 19053233 ~ 19053600 (+)
G2113552 NA non-coding upstream 25208 19052477 ~ 19052890 (+)
G2113593 NA non-coding downstream 22880 19101230 ~ 19101450 (+)
G2113646 NA non-coding downstream 113587 19191937 ~ 19192290 (+)
G2113648 NA non-coding downstream 115477 19193827 ~ 19197541 (+)
G2113656 NA non-coding downstream 126738 19205088 ~ 19205323 (+)
G2113660 NA non-coding downstream 138523 19216873 ~ 19217073 (+)
G2113578 NA other upstream 1680 19076077 ~ 19076418 (+)
G2113059 NA other upstream 409602 18667115 ~ 18668496 (+)
G2112127 NA other upstream 1174174 17903198 ~ 17903924 (+)
G2111491 NA other upstream 1322517 17754937 ~ 17755581 (+)
G2111457 NA other upstream 1369469 17708256 ~ 17708629 (+)
LOC110508695 LOC106599333 other downstream 545118 19623468 ~ 19636825 (+)
G2115369 NA other downstream 1363383 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 1762220 20840508 ~ 20842019 (+)
G2116347 NA other downstream 2296145 21374495 ~ 21375078 (+)
smg7 smg7 other downstream 4002066 23056778 ~ 23087821 (+)

Expression


Co-expression Network