G2113660


Basic Information

Item Value
gene id G2113660
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19216873 ~ 19217073 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2417069
tacctactgtgaagcatcggggtggaaacatcatgctttggggctgtttttctgcaaaggaaccaggacgactgatccgtgtaaaggaacgaatgaatggggccatgtatcgtgagattttgagtgaaaacctccttccatcagcaagggcattgaagatgaaatgtggctgggtctttcagcatgacaatggtccCAAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2417069 True 201 lncRNA 0.47 1 19216873 19217073

Neighbor

gene id symbol gene type direction distance location
LOC110508679 LOC106599305 coding upstream 7803 19205372 ~ 19209070 (+)
LOC110508675 LOC106599295 coding upstream 205232 18986697 ~ 19011641 (+)
LOC110508672 NA coding upstream 351459 18849186 ~ 18865414 (+)
LOC110508669 LOC106599285 coding upstream 400287 18726254 ~ 18816586 (+)
LOC110508668 LOC106599284 coding upstream 492702 18673302 ~ 18724171 (+)
LOC110508681 LOC106599307 coding downstream 408 19217481 ~ 19322102 (+)
LOC110508686 LOC106599593 coding downstream 154936 19372009 ~ 19374568 (+)
LOC110508689 LOC106599321 coding downstream 222552 19439625 ~ 19458620 (+)
LOC118944897 NA coding downstream 233785 19450858 ~ 19450910 (+)
LOC110508179 LOC106599327 coding downstream 313970 19531043 ~ 19542347 (+)
G2113656 NA non-coding upstream 11550 19205088 ~ 19205323 (+)
G2113648 NA non-coding upstream 19332 19193827 ~ 19197541 (+)
G2113646 NA non-coding upstream 24583 19191937 ~ 19192290 (+)
G2113593 NA non-coding upstream 115423 19101230 ~ 19101450 (+)
G2113580 NA non-coding upstream 138523 19078098 ~ 19078350 (+)
G2113705 NA non-coding downstream 63404 19280477 ~ 19283775 (+)
G2113661 NA non-coding downstream 96378 19313451 ~ 19324707 (+)
G2113726 NA non-coding downstream 109897 19326970 ~ 19327219 (+)
G2113728 NA non-coding downstream 112526 19329599 ~ 19329930 (+)
G2113729 LOC106581475 non-coding downstream 113443 19330516 ~ 19330737 (+)
G2113578 NA other upstream 140455 19076077 ~ 19076418 (+)
G2113059 NA other upstream 548377 18667115 ~ 18668496 (+)
G2112127 NA other upstream 1312949 17903198 ~ 17903924 (+)
G2111491 NA other upstream 1461292 17754937 ~ 17755581 (+)
G2111457 NA other upstream 1508244 17708256 ~ 17708629 (+)
LOC110508695 LOC106599333 other downstream 406395 19623468 ~ 19636825 (+)
G2115369 NA other downstream 1224660 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 1623497 20840508 ~ 20842019 (+)
G2116347 NA other downstream 2157422 21374495 ~ 21375078 (+)
smg7 smg7 other downstream 3863343 23056778 ~ 23087821 (+)

Expression


Co-expression Network