G2129271


Basic Information

Item Value
gene id G2129271
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32611013 ~ 32611763 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2434584
atggcacgtgggtacctgcttctataaaccaatgaggggatgggagaggcaggtcttgcagcgcgatctgcgtcagaaataggaacgacttctattttagcccttggcaacgccgACGCTCGTTGgcacgcgcgagcagtgtgggtgcaataattgaataacatggatttctacatttattttgcgatgcacgcgacgtgtccggtctggtcagcatctAAGTATTCCTGAAGGGACTGATCTTCATACTTGTATGAAGGGGATATCACACAAAAAAATGCTAAGTATTCCTGAAGGGACTGATCTTCATACTTGTATGAAGTGGATATCACACAAAAAATGCTAAGTATTCCTGAAGGGACTGATCTTCATACTTGTATGAAGGGGATATCCGACGGAAGCCCCTTTTTGACCTCCTCCACCCACTGCAGCGGTGTCCTTAGAGGGGAGAAGTCGGTCACTACTGCCCCAAAACTCCAGTCCGCCACAAACCCTGGCAGCAATTCTCCAGCGGAGCCCTGGAGCAGGTGGAACTGAATATCCAGGGCACTGCAGTCCTGTGAAAG

Function

NR:

description
deoxyribodipyrimidine photo-lyase-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2434584 True 566 lncRNA 0.49 2 32611013 32611763

Neighbor

gene id symbol gene type direction distance location
nmur1b LOC106599180 coding upstream 21132 32581133 ~ 32589881 (+)
LOC110508222 LOC106598808 coding upstream 207520 32374691 ~ 32403493 (+)
LOC110509002 LOC106599181 coding upstream 242098 32363038 ~ 32368915 (+)
LOC118944910 NA coding upstream 338036 32272798 ~ 32272977 (+)
LOC118944909 NA coding upstream 338559 32272274 ~ 32272454 (+)
LOC110509005 NA coding downstream 2804 32614567 ~ 32622807 (+)
pfn2l LOC106598797 coding downstream 61982 32631289 ~ 32700844 (+)
LOC110509009 LOC106598794 coding downstream 73773 32685536 ~ 32690499 (+)
LOC110509011 LOC106598790 coding downstream 98832 32710595 ~ 32718847 (+)
zbtb41 zbtb41 coding downstream 147403 32759166 ~ 32803922 (+)
G2129262 NA non-coding upstream 18867 32591894 ~ 32592146 (+)
G2129242 NA non-coding upstream 47316 32563462 ~ 32563697 (+)
G2128835 NA non-coding upstream 252667 32358142 ~ 32358346 (+)
G2128834 NA non-coding upstream 253311 32357478 ~ 32357702 (+)
G2128832 NA non-coding upstream 268374 32342428 ~ 32342639 (+)
G2129310 NA non-coding downstream 20287 32632050 ~ 32632657 (+)
G2129353 NA non-coding downstream 110390 32722153 ~ 32722430 (+)
G2129355 NA non-coding downstream 114818 32726581 ~ 32726881 (+)
G2129356 NA non-coding downstream 115440 32727203 ~ 32727638 (+)
G2129357 NA non-coding downstream 116035 32727798 ~ 32728930 (+)
G2128753 NA other upstream 336633 32269318 ~ 32274380 (+)
LOC110508984 NA other upstream 555358 32053231 ~ 32055655 (+)
G2128614 NA other upstream 662711 31945164 ~ 31948898 (+)
G2128189 NA other upstream 870943 31739312 ~ 31740070 (+)
LOC110508221 LOC106598877 other upstream 967551 31594783 ~ 31643462 (+)
G2129371 crb1 other downstream 137165 32748928 ~ 32749568 (+)
LOC110509024 LOC106598521 other downstream 446534 33050612 ~ 33070407 (+)
G2129639 LOC106598496 other downstream 696335 33308098 ~ 33308991 (+)

Expression


Co-expression Network