G2137212


Basic Information

Item Value
gene id G2137212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 40714868 ~ 40716682 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2444237
agcatttcactgtatagtctacagctgttgtattcagcgcatgtgatttgatttaatcaGATTTAGTCCCAGTAGTTATGTGGAAGAGGATACTCTCAAACTAGGCTGgttttcactttctctctttctgattCAAACTTTAACTGGAGCAAACTTGTTTATTGATTAAGGGCCCACCACACACAGCGCACTGTATGTTCACCTGACATGTGTTCGCttgctgtgtgtgttggggacCACCTGCCGATGGCACCTGACTGCTGACATGAAACACTGGCTAAGTCTAtttggtttgtgtgtttgtttgctagTTACCTAACAATGCAGATAGGTGGATGCTAACCAGATAACAAATGGACTCCTCAAAAGTGATTGTGTGGGTACTGAACAGCATCctagccatttaaaaaaaatatatatttttaagcaaACATGGAACATGTTCTCCTGTCATTTTGACATTTTCTTTGAGAACGCAGATCACATCACGTCTTGATGTTTTGATGAGGTGATATGCTAGCCTAGCTACATTCAATGCTGTTTTTTTCTGTTATCTAGGATTAGTACTTggtatggatccccattagttcctgttaagtcagctactcttcctggggtttattatggatccccattagttcctgctaagtcagctactcttcctggggtttattatggatccccattagttcctgccaaggcagcagctactcttcctggggtttattatggatccccattagttcctgtcaaggcagcagctactcttcctggggtccaaacacattaaggcacttacactTTATGTAAGTGTACCCATTAAGCCCACTTCCATATTGTTAGATCATATACAGTACCGAAGTACTCGTCatttaaaaaaactattttctacactgtagaaatatagtgaagacatcacaactatgaaataacacatatggaatcatgtagtaacccaaaaagtgtttaacaaatcaaaatatatttgagattctttaaagtagccaccctttgccttgttgacagctttgcacactcttggcattctctcaaccagcctcatgaggtagtcacctggaatgcatttcaattaacaggtgtgccttgttcattTGTGGCATTTcttccattactttaagacataaaggtccgTCTATgtgaaacatttcaagaactttgaaagtttctttcaagtgcagtcgcaaaaaccatcaagcgctatgatgaaactggctctcatgaggaccgccacaggaaaggaagacccagagttacctctgctgcagaggataagttcattagagttaccagcctaataaattgcagcccaaataaatgcttcacagagttcaagtaacagacatctcaactgCAACTCCTCAGAGgatactgtgtgaatcaggctttcgtggtcgaattgctgcaaaccactactaaagaacaccaataagaagagacttgcttgggccaagaaacacaataaatgggcattagactggtggaaatctgtcctttggtctgatgattccaaatttgagatttttggttccaactgctgtgtctttgtgggaCGCAGAGTATGatgtccgcatgtgtggttcccaccgtgaagcatggaggaggtggtgtgatggtgctttgctggtgacactgtcagggattcatttagaattcaaggcacacttaaccagcatggctaccacatcattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2444237 True 1710 lncRNA 0.41 2 40714868 40716682

Neighbor

gene id symbol gene type direction distance location
LOC118944865 NA coding downstream 106734 40605216 ~ 40608134 (-)
LOC118944871 NA coding downstream 115548 40597260 ~ 40599320 (-)
LOC110508251 gnal coding downstream 126936 40452316 ~ 40587932 (-)
LOC110508253 LOC106591876 coding downstream 397357 40168411 ~ 40317511 (-)
LOC110509140 LOC106596615 coding downstream 587667 40115401 ~ 40127201 (-)
LOC118944846 NA coding upstream 31834 40748516 ~ 40750815 (-)
LOC110509159 LOC106596360 coding upstream 35596 40752278 ~ 40758925 (-)
LOC110508261 dnajb4 coding upstream 66924 40783606 ~ 40842867 (-)
LOC110509157 dnajb4 coding upstream 150597 40867279 ~ 40872210 (-)
ak5 LOC102787869 coding upstream 334389 41051071 ~ 41200160 (-)
zfyve9a LOC106930947 non-coding downstream 28601 40684391 ~ 40740806 (-)
G2137193 NA non-coding downstream 60632 40653971 ~ 40654236 (-)
G2137190 NA non-coding downstream 65863 40648787 ~ 40649005 (-)
G2137188 NA non-coding downstream 66810 40647750 ~ 40648058 (-)
G2137187 NA non-coding downstream 67763 40646896 ~ 40647105 (-)
G2137215 NA non-coding upstream 9126 40725808 ~ 40727157 (-)
G2137217 NA non-coding upstream 24222 40740904 ~ 40741182 (-)
G2137235 NA non-coding upstream 73116 40789798 ~ 40790113 (-)
G2137249 NA non-coding upstream 127564 40844246 ~ 40848706 (-)
G2137070 NA non-coding upstream 145999 40862681 ~ 40863721 (-)
G2137111 NA other downstream 239167 40472088 ~ 40475701 (-)
G2137086 NA other downstream 299328 40415303 ~ 40415540 (-)
G2136243 NA other downstream 592969 40051639 ~ 40121899 (-)
LOC110508256 LOC106596607 other downstream 717822 39973367 ~ 40103148 (-)
G2136189 NA other downstream 769034 39943153 ~ 39945834 (-)
G2137419 NA other upstream 544118 41260800 ~ 41261271 (-)
LOC110509166 LOC106596257 other upstream 913979 41630582 ~ 41641166 (-)
G2137555 NA other upstream 1015032 41731714 ~ 41736389 (-)
G2137648 LOC106596196 other upstream 1094113 41810795 ~ 41814201 (-)
G2137814 LOC106597294 other upstream 1504240 42220922 ~ 42226965 (-)

Expression


Co-expression Network