G2175678


Basic Information

Item Value
gene id G2175678
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 32060579 ~ 32060901 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2486770
CCGCTGACACTAAGGTTCACACACGTTTCCTGGCCGGCATCACAGTGATGAAGATAAACTCAGCAAGAAACGAaaggtcctctcactgtcaactgcttttattttcagcaaacttaacatgtgtaaatatttgtatgaacataacaagattcaacaaccgagacataaactgaacaagttccacagacatgtgactaacagaaatggaataatgtgtccctgaacaaagggggggtcaaaatcaaaagtaactgtcagtatctggtgtggccactagctgcattaagtactgcagtgcatctcctcctcatggactgcaccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2486770 True 323 lncRNA 0.43 1 32060579 32060901

Neighbor

gene id symbol gene type direction distance location
LOC110510053 LOC106563566 coding upstream 39116 32003178 ~ 32021463 (+)
LOC110510052 spsy coding upstream 67779 31943605 ~ 31992800 (+)
LOC100136774 tgf coding upstream 123584 31931801 ~ 31936995 (+)
LOC110510050 LOC106563631 coding upstream 129749 31929170 ~ 31930830 (+)
LOC110510049 LOC106563630 coding upstream 133120 31924222 ~ 31927459 (+)
LOC110510056 LOC100194697 coding downstream 7653 32068554 ~ 32093481 (+)
LOC110509425 LOC106563572 coding downstream 54728 32115629 ~ 32150579 (+)
LOC110510057 LOC106563575 coding downstream 106400 32167301 ~ 32177009 (+)
LOC110510058 LOC106563633 coding downstream 117973 32178874 ~ 32185850 (+)
LOC110510061 spag16 coding downstream 177095 32237996 ~ 32241172 (+)
G2175677 NA non-coding upstream 66 32060147 ~ 32060513 (+)
G2175667 NA non-coding upstream 13651 32045193 ~ 32046928 (+)
G2175411 NA non-coding upstream 25645 32034705 ~ 32034934 (+)
G2175377 NA non-coding upstream 66495 31993385 ~ 31994084 (+)
G2175685 NA non-coding downstream 59581 32120482 ~ 32120871 (+)
G2175733 NA non-coding downstream 133908 32194809 ~ 32195151 (+)
G2175734 NA non-coding downstream 138209 32199110 ~ 32199434 (+)
G2175735 NA non-coding downstream 143697 32204598 ~ 32205434 (+)
LOC110510064 liph non-coding downstream 191208 32252109 ~ 32282752 (+)
G2175413 NA other upstream 22843 32037047 ~ 32037736 (+)
LOC110509422 LOC106563560 other upstream 159343 31820484 ~ 31908546 (+)
G2175233 psmb6 other upstream 449110 31610544 ~ 31611469 (+)
G2174785 NA other upstream 742202 31317837 ~ 31318377 (+)
LOC110510022 LOC106563433 other upstream 1236435 30817845 ~ 30824144 (+)
cxxc5a LOC106563628 other downstream 1161916 33212994 ~ 33235535 (+)
LOC110510125 LOC106563697 other downstream 2070110 34105921 ~ 34135553 (+)
LOC110510132 rin1 other downstream 2170755 34227307 ~ 34236487 (+)
G2177424 NA other downstream 2298723 34359624 ~ 34460769 (+)

Expression


Co-expression Network