G2177422


Basic Information

Item Value
gene id G2177422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 34356240 ~ 34356463 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2488842
acatttgaccttgtgttttaggttattgtcctgctgaaaggggaatttgtCTCCCAGAGTCTTATGGAaagagactgaaccaggttttcctctaggattttgcctgtgctaagcactattccgtttctttttatcataaaaactccctagtctttgccgatgacaagcatacccataacatgaggcagccaccaccatgcttgaaaatatgaagagtggtactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2488842 True 224 lncRNA 0.42 1 34356240 34356463

Neighbor

gene id symbol gene type direction distance location
LOC110510136 LOC106602966 coding upstream 20499 34329181 ~ 34335741 (+)
LOC110509380 NA coding upstream 52893 34299885 ~ 34303347 (+)
LOC110510134 LOC106563705 coding upstream 65686 34279612 ~ 34290554 (+)
LOC110510132 rin1 coding upstream 120348 34227307 ~ 34236487 (+)
pacs1a LOC106563701 coding upstream 161023 34178831 ~ 34195217 (+)
LOC118945289 NA coding downstream 37527 34393990 ~ 34397166 (+)
LOC110510141 LOC106563694 coding downstream 91376 34447839 ~ 34455631 (+)
LOC110510140 NA coding downstream 99951 34456414 ~ 34462457 (+)
znrd2 ssa27 coding downstream 113389 34469852 ~ 34472094 (+)
LOC110510143 LOC106563691 coding downstream 116104 34472567 ~ 34477333 (+)
G2177420 NA non-coding upstream 1075 34354938 ~ 34355165 (+)
G2177408 NA non-coding upstream 30607 34325423 ~ 34325633 (+)
G2177399 NA non-coding upstream 40630 34315389 ~ 34315610 (+)
G2177393 NA non-coding upstream 50807 34305230 ~ 34305433 (+)
G2177388 NA non-coding upstream 58203 34297609 ~ 34298037 (+)
G2177426 NA non-coding downstream 6059 34362522 ~ 34364420 (+)
G2177496 NA non-coding downstream 95710 34452173 ~ 34452650 (+)
G2177506 NA non-coding downstream 138151 34494614 ~ 34495869 (+)
G2177507 NA non-coding downstream 139842 34496305 ~ 34496775 (+)
G2177515 NA non-coding downstream 182807 34539270 ~ 34539757 (+)
LOC110510125 LOC106563697 other upstream 220841 34105921 ~ 34135553 (+)
cxxc5a LOC106563628 other upstream 1120705 33212994 ~ 33235535 (+)
LOC110509425 LOC106563572 other upstream 2230162 32115629 ~ 32150579 (+)
G2175413 NA other upstream 2318504 32037047 ~ 32037736 (+)
G2177424 NA other downstream 3161 34359624 ~ 34460769 (+)
LOC110510159 LOC106563679 other downstream 446476 34784319 ~ 34825545 (+)
ndufa2 ndua2 other downstream 1149385 35505848 ~ 35507048 (+)
G2179418 NA other downstream 1495191 35851654 ~ 35856462 (+)
G2179454 LOC106602907 other downstream 1556027 35912490 ~ 35925031 (+)

Expression


Co-expression Network