trnaa-ugc-253



Basic Information


Item Value
gene id trnaa-ugc-253
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 905117 ~ 905188 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaa-ugc-253
ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcttctcca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-253 True 72 mRNA 0.54 1 905117 905188

Neighbor


gene id symbol gene type direction distance location
trnaa-ugc-252 NA coding downstream 2080 902966 ~ 903037 (-)
trnat-ugu-116 NA coding downstream 2823 902223 ~ 902294 (-)
trnaa-ugc-251 NA coding downstream 4260 900786 ~ 900857 (-)
trnat-ugu-115 NA coding downstream 5003 900043 ~ 900114 (-)
trnaa-ugc-250 NA coding downstream 6584 898462 ~ 898533 (-)
trnat-ugu-117 NA coding upstream 1347 906535 ~ 906606 (-)
trnaa-ugc-254 NA coding upstream 2090 907278 ~ 907349 (-)
trnat-ugu-118 NA coding upstream 3533 908721 ~ 908792 (-)
trnaa-ugc-255 NA coding upstream 4276 909464 ~ 909535 (-)
trnaa-ugc-256 NA coding upstream 6446 911634 ~ 911705 (-)
G2340897 NA non-coding downstream 85491 811254 ~ 819626 (-)
G2340903 NA non-coding downstream 87303 810062 ~ 817814 (-)
G2340902 NA non-coding downstream 88714 808537 ~ 816403 (-)
G2340923 NA non-coding downstream 100738 799794 ~ 804379 (-)
G2340925 NA non-coding downstream 112483 788819 ~ 792634 (-)
G2340968 NA non-coding upstream 11817 917005 ~ 921098 (-)
G2340974 NA non-coding upstream 28303 933491 ~ 935264 (-)
G2341006 NA non-coding upstream 100735 1005923 ~ 1040396 (-)
G2341021 NA non-coding upstream 153617 1058805 ~ 1115633 (-)
G2341025 NA non-coding upstream 154669 1059857 ~ 1064279 (-)
G2340905 NA other downstream 90462 806890 ~ 814655 (-)
LOC110514508 LOC106595224 other downstream 788401 114200 ~ 116716 (-)
G2340407 NA other downstream 841979 62414 ~ 63138 (-)
G2341053 NA other upstream 253410 1158598 ~ 1164054 (-)

Expression



Co-expression Network