G2340923


Basic Information

Item Value
gene id G2340923
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 799794 ~ 804379 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2680677
agagcatacaggtcgtagtggccatatcaatacaattctttacactgttctaatgaaagtacatttccataatatcatctagcttccataaatgtcgaacaaggcttgaacctaggattgaacccatgtgcttcagtttacaaaaacagatgacttagcacatctatttccttcttaaaatgtcaacattctggaaagtagagttgtgcaaaagctaatttcacaaataaatatactcatcagagaatttggggattaacttcagagcgcatgcatttcaagtattagctctaccgtagaggcccttactatataatagcagggttgccattttgagaaaacttttttttcttcaaagtcctccagtgaaagaaccttcacatggtaccagctatctttcagtaaggtacggatgggatttgaacccatgatcttcggtttacaagaccaacgccttaccgcttggccacgatgccactctatgctgcaagatatttatcaacatt
>TU2680676
agagcatacaggtcgtagtggccatatcaatacaattctttacactgttctaatgaaagtacatttccataatatcatctagcttccataaatgtcgaacaaggcttgaacctaggattgaacccatgtgcttcagtttacaaaaacagatgacttagcacatctatttccttcttaaaatgtcaacattctggaaagtagagttgtgcaaaagctaatttcacaaataaatatactcatcagagaatttggggattaacttcagagcgcatgcatttcaagtattagctctaccgtagaggcccttactatataatagcagggttgccattttgagaaaacttttttttcttcaaagtcctccagtgaaagaaccttcacatggtaccagctatctttcagtaaggtacggatgggatttgaacccatgatctttggtttacaagaccgacgccttaccgcttggccaccatgccactccatgctgcaagatatttattaacattctggaaagtagtagttgtgtaatgtgaatttggcaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2680677 False 506 lncRNA 0.38 2 799794 804379
TU2680676 True 543 lncRNA 0.38 2 801797 804379

Neighbor

gene id symbol gene type direction distance location
trnar-ucg-75 NA coding downstream 124364 675358 ~ 675430 (-)
trnar-ucg-74 NA coding downstream 126528 673194 ~ 673266 (-)
trnar-ucg-73 NA coding downstream 128316 671406 ~ 671478 (-)
trnar-ucg-72 NA coding downstream 129385 670337 ~ 670409 (-)
trnar-ucg-71 NA coding downstream 129735 669987 ~ 670059 (-)
LOC118947141 LOC106595224 coding upstream 16069 820448 ~ 824848 (-)
LOC118947142 LOC106596281 coding upstream 25083 829462 ~ 837281 (-)
LOC118947146 NA coding upstream 44829 849208 ~ 851265 (-)
LOC118947149 LOC106581842 coding upstream 50594 854973 ~ 857555 (-)
trnat-ugu-110 NA coding upstream 84598 888977 ~ 889048 (-)
G2340925 NA non-coding downstream 7160 788819 ~ 792634 (-)
G2340901 NA non-coding downstream 23706 767980 ~ 776088 (-)
G2340894 NA non-coding downstream 99524 693757 ~ 700270 (-)
G2340875 NA non-coding downstream 177719 619307 ~ 622075 (-)
G2340848 NA non-coding downstream 276389 519204 ~ 523405 (-)
G2340902 NA non-coding upstream 4158 808537 ~ 816403 (-)
G2340903 NA non-coding upstream 5683 810062 ~ 817814 (-)
G2340897 NA non-coding upstream 6875 811254 ~ 819626 (-)
G2340949 NA non-coding upstream 71653 876032 ~ 992003 (-)
G2340968 NA non-coding upstream 112626 917005 ~ 921098 (-)
LOC110514508 LOC106595224 other downstream 683078 114200 ~ 116716 (-)
G2340407 NA other downstream 736656 62414 ~ 63138 (-)
G2340905 NA other upstream 2511 806890 ~ 814655 (-)
G2340951 NA other upstream 74430 878809 ~ 929132 (-)
G2341053 NA other upstream 354219 1158598 ~ 1164054 (-)

Expression


Co-expression Network