LOC118947138 (LOC106586259)


Basic Information

Item Value
gene id LOC118947138
gene name LOC106586259
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 1136151 ~ 1137529 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972395.1
CCTGGGTCACATGGTGCAGAGCTGCACCCCTACCCGTGTCATGAATGCCCTGCTGGTCGGTGGGCTGAGCCACCGTAACGCTGCGGTGAGGAGCTGTACTGCTCAGCACCTGGAGAGACTGGCTGAGGTCATGGGGACGGCTCGTCTCCTCTCGGGGAAGAAAGACCTCACTGACCGTTTCTTGATTGCCGTCAGTAAACTGGCTGTGGACCCTTCACAGGAAGTCAGGTGGGAAGTTCCTCCTGTAAAGTAGCTTGCTTCAACATAACAGTTAAGGCTGGGATTAAAT

Function

NR:

description
TOG array regulator of axonemal microtubules protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972395.1 True 289 mRNA 0.56 2 1136151 1137529

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa-211 NA coding downstream 13008 1123071 ~ 1123143 (-)
trnaf-gaa-210 NA coding downstream 14104 1121975 ~ 1122047 (-)
trnaf-gaa-209 NA coding downstream 15861 1120218 ~ 1120290 (-)
trnaf-gaa-208 NA coding downstream 16970 1119109 ~ 1119181 (-)
trnaf-gaa-207 NA coding downstream 18077 1118002 ~ 1118074 (-)
G2341032 NA non-coding downstream 15393 1117761 ~ 1120758 (-)
G2341021 NA non-coding downstream 20518 1058805 ~ 1115633 (-)
G2341020 NA non-coding downstream 61951 1068581 ~ 1074200 (-)
G2341025 NA non-coding downstream 71872 1059857 ~ 1064279 (-)
G2341006 NA non-coding downstream 95755 1005923 ~ 1040396 (-)
G2341059 NA non-coding upstream 46738 1184267 ~ 1184799 (-)
G2341069 NA non-coding upstream 91284 1228813 ~ 1229240 (-)
G2340951 NA other downstream 207019 878809 ~ 929132 (-)
G2340905 NA other downstream 321496 806890 ~ 814655 (-)
LOC110514508 LOC106595224 other downstream 1019435 114200 ~ 116716 (-)
G2340407 NA other downstream 1073013 62414 ~ 63138 (-)
G2341053 NA other upstream 21069 1158598 ~ 1164054 (-)

Expression


Co-expression Network