trnap-cgg-214


Basic Information

Item Value
gene id trnap-cgg-214
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493868.1
NCBI id JAAXML020000511.1
chromosome length 103545
location 4803 ~ 4874 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-214
ggctcgttggtctaggggtatgattctcgcttcgggtgtgagaggtcccgggttcaaatcccggacgagccc

Function

NR:

description
PREDICTED: serine/threonine-protein kinase Nek3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-214 True 72 mRNA 0.61 1 4803 4874

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-213 NA coding downstream 796 3936 ~ 4007 (-)
trnap-cgg-212 NA coding downstream 1671 3061 ~ 3132 (-)
trnar-ucg-157 NA coding downstream 2538 2192 ~ 2265 (-)
trnap-cgg-211 NA coding downstream 3416 1316 ~ 1387 (-)
trnap-cgg-210 NA coding downstream 4290 442 ~ 513 (-)
trnap-cgg-215 NA coding upstream 804 5678 ~ 5749 (-)
trnap-cgg-216 NA coding upstream 1670 6544 ~ 6615 (-)
trnap-cgg-217 NA coding upstream 2544 7418 ~ 7489 (-)
trnap-cgg-218 NA coding upstream 3416 8290 ~ 8361 (-)
trnap-cgg-219 NA coding upstream 4329 9203 ~ 9274 (-)
G2370425 NA non-coding upstream 14697 19571 ~ 19834 (-)
G2370427 NA non-coding upstream 21656 26530 ~ 26807 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_018411 CR385078.6 non-coding NC_007131.7 CM002904.2 47120504 ~ 47125583 (-)
tiger barb (Puntius tetrazona) trnap-cgg_28 NA misc NC_056709.1 CM032078.1 2984278 ~ 2984349 (-)