G3373 (LOC103359075)


Basic Information

Item Value
gene id G3373
gene name LOC103359075
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9840590 ~ 10042004 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4718
GCCAGATTGTTGTAGCTCCTCgtgtgtctctctttccagTTTTCTTGTGTATGTATCCAGCATTACCAGACCTACCGTTTGTTTTCCTGACCACGTCTTCTGCCTTTTGGATTTGTACCATTGCCTGGATTGtttattctttaaaaaacatACTCAAATGCTCGACTCAACACGGAGTAGAAGGTTCAATGAAATCAGTAGCTGCTGGATCCATCACTGCTATTTTCCTGGCTATCATATTCCTCTGTGCCTTCCTATTTATTAGAAGAAAGAGGTCCTCAAAACGAACCAGCGAGCCTGGAGAGAGACCAGACAACCAAGCTCAGGTCAGAAGAAGAG
>TU4721
GAGTCCCTCTGCTGAGATAGTGGAGGGCAGTTCAGTGACtctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAGAATGAAGACTCACCAAAAGCATCAGGACAGATCTTCACCATCACTGACTTCAGAGCTGAACACAGTAGGAATTATTACTGTGAAGCCCAGAACAGAAGAGGACGTCAGAACTCCACCTTACATCTGACTGTTGTAGCAGGTTCAATGAAATCAGTAGCTGCTGGATCCATCACTGCTATTTTCCTGGCTATCATACTCCTCTGTGCCTTCCTATTTATTAGAAGAAAGAGGTCCTGGAAACGAACCAGCGAGCCTGGAGAGAGACCAGACAACCAAGCTCAGGGTTCAGTGTATGACAGTCCTTCAGCTCCAGTCCAGAGAACTCCAGCAGAGCAGCATGAAGACCTTTGCTATGCCAGCGTGAGCTTCTCTAAAAACCAGGAAGATGCTCTCTACTCCACCATCAGGCTAGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC103359075

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4718 False 339 lncRNA 0.41 3 9840590 9842047
TU4721 True 507 TUCP 0.49 4 10026270 10042004

Neighbor

gene id symbol gene type direction distance location
atpv0e2 LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 coding downstream 252624 9578442 ~ 9587966 (-)
LOC120559444 LOC103373853,LOC100706153,LOC102224648,LOC104962798,LOC108246276 coding downstream 350850 9477680 ~ 9489740 (-)
LOC120559457 LOC103383201,LOC105931257 coding downstream 428233 9396830 ~ 9412357 (-)
hoga1 hoga1,LOC102797601 coding downstream 509036 9304947 ~ 9331554 (-)
lcor LOC103370035,LOC102205115,LOC102298371,LOC101480656,LOC102797307,LOC105931196 coding downstream 593685 9165988 ~ 9246905 (-)
LOC120565745 NA coding upstream 130081 10172085 ~ 10181987 (-)
LOC120567750 LOC103370659 coding upstream 455319 10497323 ~ 10571770 (-)
LOC120567745 LOC101486982,LOC102213734 coding upstream 537281 10579285 ~ 10624015 (-)
ccdc130 ccdc130 coding upstream 583320 10625324 ~ 10631727 (-)
wdr83 wdr83,LOC102798015 coding upstream 605073 10647077 ~ 10655066 (-)
G3360 NA non-coding downstream 16327 9693324 ~ 9824263 (-)
LOC120559598 NA non-coding downstream 44600 9793232 ~ 9795990 (-)
G3367 NA non-coding downstream 67655 9771572 ~ 9772935 (-)
G3361 NA non-coding downstream 75542 9701071 ~ 9765048 (-)
G3368 NA non-coding downstream 85562 9751329 ~ 9755028 (-)
LOC120559549 NA non-coding upstream 26485 10068489 ~ 10070063 (-)
G3418 NA non-coding upstream 30322 10072326 ~ 10072973 (-)
LOC120559577 NA non-coding upstream 31097 10073101 ~ 10073828 (-)
G3421 NA non-coding upstream 46614 10088618 ~ 10099262 (-)
G3424 NA non-coding upstream 57053 10099057 ~ 10100398 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other downstream 200076 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other downstream 272745 9525261 ~ 9567845 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 932504 8905672 ~ 8908086 (-)
G2938 LOC107098689,LOC103359055 other downstream 1072617 8758649 ~ 8767973 (-)
wipf2a NA other downstream 1339428 8435799 ~ 8501162 (-)
G3586 LOC104950333 other upstream 857554 10899558 ~ 10905235 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other upstream 924358 10966362 ~ 10993201 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 2600009 12642013 ~ 12659983 (-)
LOC120561813 NA other upstream 2762498 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 2818280 12860284 ~ 12860355 (-)

Expression


Co-expression Network