G3586 (LOC104950333)


Basic Information

Item Value
gene id G3586
gene name LOC104950333
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 10899558 ~ 10905235 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4974
ACACTGATAGCAAATGTATGGAGAAGCAATGACTTAGCAAAAACCTTGCAATCCCCAAAACCccattaaaaaaacagaaaacaaaaacaaacaaagaaaaaaagatcagatgttccctttttttttttttcccaaaagaaTGGGATTTGTTCTTGGAAAAGCACACACAACATGCTTTCACACAAGGGCAGTGTTGTGTGTCGGCCATTTTGGATCTGCTGTTACAATTCTGGACAAGCGAGTGGTGTCATGGAGCCAAAATGgaggtgctttttttttcttccctgccTGTCTGTCAACACGCTTGGCGGCGTGTTGGTGTTGGTGCGTCGGCAGGCTGCTGATGGGGACGTGAGGGGTCAGAATGTGTAATGTAGGTTAGTGAAAGGAGAGAAAGGTGTCTATATTACAACGTCTGAAGCCATGCCAGGCAAAACCATACAATAACTCAATCCGAGGCCTGCTTGTGTTTGTAGCTGACTCTTCACTACGTTGTCTAACTATCTAGCTACCTAACTCTAGAGGGACCTGAGAAGTAAGCAAACCGCTTTGAACCTCTGTAAACCTCTCACTACACCGCCTGAAACTGGACCCTCGACATTTCTGGGATGGACACAAAATGCCGTGCCTAACAGGGAGGTGAAGCCAAGAGAGCTAGCTTGCTATCTGCAAGAGAGCTAGCTTGCTATCAGCATCCTGGTACATCTACAATGACCATTTGATTCTTTGAAAGTCAAAACCATGAGGTTTTGATTCAAACTGCGTGAAGCCATTTTGATTTCTGGCAACTACAAAAATCGATGTATGTTTGAATGGGATATTTAAGTGACCAAGCCCATACCGGATGTGATATTGATTTCCCCTACGTCAAGTCTTAGCAGTCTTGGCTATTTCCTCACCGTGGCCCAGTCTCAAAATCACCGCTCTCCCTGTTTCTATGCTAGCATGGGAGCCGGTGGGACTCGAATTTTAAGGCGTAGTGTGGTTGGTCTCAACTACTACAGAGGGCAATGGGCAAGGGAGGAGGCTGGCTAAGGCCGAGGAGAATGGGGAGTGATGAATGTGACTCTGATACAGAAGGCACTGTGGCTCTGTAGGGGGTTTTGGGGAAGCGTCCCCACCTGCCGTAACCTCACTCGATGGGAGGTGTGGGCAAGAGGGGGTTTCGGGGTTTGCGCCCTTTGACTCCCGCCAAACAGATCAACAACGaaagcaaccccccccccccccatccccatcTTCACTACGCTATGCTCAACTACTAGGCCTGGAGGCAACACATTtcgggagaggagagaaagatgggGAGGGAAACGGGATCACGTGGAAGAGGGACAGCGACAAAGGTGCGTGAAAGAAAGGGGTCCGTCTTCACAATTTCTCAGATCCATGTGCTCCTGTTTCAATAATCTATTTTACAGTACCACAGCGTTGCAGCGTTGCGTCGCCGAAATAATACGGATGGATGGGATAGGATGCTTATGAGGTCTGCATAGAGTCAAAACACGTGGACTGGGGTTTGTTTTCTGGCGTTAATGCGACTGCGGAGAAAACAGTAAAAGGTTTCAGCTAGAGTAGCTAGATCGTCGACCGTGTCATGAGCGTGAACGgtatgcaaaataaataaatctctgAAACTCTATACTCTGTCTGTTATCTATAACTACATCTACTGTATTATATCTAGATTTCTATGTAGTTTATCACCTATATTTATCTATACTTTATCATCTTGTCCTAGAGTTATTGAATATTCAATAATTGTTGTCCCTCATAACAATAAGGATGCAAATACTACACTAAGTGTTTCTGTCCTATGATGCTTTTTGTGTTGCTCTCTGGCAAGCTGAAAGAACAGACGTCAAGGCAAATGGACAGAAAAAGATAGGTGAGGAAAGAGAGGTTGATTGGATACTGAAGTGGCTTTTGGCAGAGGAGGTTTCAACTTTGCTACAACCTCATTTGATTGGATTGGTGGTTTCGGTGACTGTTCTCTGGTTATCCAGACCTGAGAGAAGAGTTTGGGGGTCAGCATTggcacagacaggcagacaggaggACGGGCCGAACAAACGGACAGATATGGCGTCTCTCAGGCTACATCCGTGTTCCCTGACTAGGACTGGACTTTATCTATATAGATATAATATAAGAGACAGGTAGAAGTGGAGGTTTCACTCCAGGTCTAGAAAACAGGATGTGGCCCCGGAGGCTGTCCTGTAGAGAGGGAAGGCAGGGCGGATAATGTGCGCTTATAACTGCCCCCTGGtggcaaaaaaaagagaacaacaCCACTTAATACTTACACCAACACTGTACCAACAATACTGTGCTGTCACTGCCGGCAACCTATCGCACTACAAAACTTCGGAGCCAGATAGAGGGAAAAGATTGAGATTCGTAGTTGGCTGAAAGCAGAAGAAGAATTCAACCTCGGTAGAACTTTAACTCTGCGGTGTAAAAATGCAGACCGACTCGTCCACATTCTCAATGATTTGGTCTACCCCTCTCTCTCCGAACACGAATTCTTGATCTTTGGGTTGGCTTATCAAGAGTACTGAGTGAAGTCAGGTACTGAAGCTACCCTGACCTCTACCTCCATTCTGAAGTGAGGCTTTATCCTAAGAGTTGCGTTACAACACGCAACGCTGCTAAGTGAATGTTCCCAAGTCATCGTTGCCCCCCGAAACGGTTGCAGGAAGGCATCAGGAACCCGGTAAACGTCATTGAACGGGGGGGATTAAAACATAACGGATGTAAACAAGATGGACATAGCATACTTAAACTCCAAATAACATGACAACAAATCTACAGCGACAGttccatcaatcaatcaatcattcaaTCATCAGTATCATCATCATTGTCATCGTCGTTTTGCATTGACATTGATATCATTATTCATAAGACTATCATCATTAACAATAATAAATCAAGTGTGGTAGAAGTCCGCTTCTCTCCGCTCTTTCTCCCTCTTGTTTTTACAAGCACAACAGGAAACTTAAATGTGATCCTGCAGTGTTTCCCGTCTTCAAACAGGTTGTGGAAACGTCGCTTTTGAACGGCATCGGCAGAAAACGGAGAAAAACTAAATTTGCCGACCGTCAAAATCCGTTTTGGGTAAAAACGAAACGGAAACTCCATTTGAGAtgtcagagagggagagagtctGATAGAAGAGAACTTCTTTTGTAAACCTAAATGCAAAGTTTCCTATAAAGCCCCCAGGTCCCACCCACACCAGTTAGATTTCCTCTCTAGTATGTATTTAATCAATCATGCAGGTTTCCATCAAACTCCGAAAAAGATCAAAGGAGGCTGAGCGAATGCAACAGAAGAACCAAGCTCCAATGTccgaagaagaacaagaaggagAAGTAATCGATAGAAGAAATACTGAAGAAATTAGTCTTTTTCCCCatccctcctttcctctcctccgcCCCATTCAACCGcgtgatgtcatttcctgtgAGGTCATCCCTCGCCTTGCACCGGGTCGGGTAACCGAGGAGGAAGGGGCTTGACGAAGTGTCCGACTCCCCTCTCAAGTTATCTGAGACTCCCCGTCCCCCCCCCGTCCCCCGTCCCCCATAGCCCACTTGAACAGGAAGTGAtgtcacacCAGTTCCGTCAGCATTAGGTGAGTCTTTAACAGTAAACAGAGATGATAAAACTCATCAAATATCAGCcagcgctgtgattggctggtttTTGCAGTATAGGCGGAGCTTCCTGGTTCTGTCCCTtggaaaggaaaaaaggttAAAGATAAAGTGGTtgttctcccttttttttctcttttcattgttttgtcatgtaaaGTTTCATTTTGTTCTTCATTGTTCAAGTTTGATTTTTCTGGAGGCATAGCTTGGCATGGTAAGGGTTAGGGGGTCCTGgctttttgttcatttatttttctttaaacacATCTGTTTGAGGAGCAGAGTCCGAGCAGTGGACTCTGTGTTCCAGCTCGTGTTCAGGCTTTTACATCAGCAGACTGGCCAGCGACAGATAGCACACATCTGACGAAAACCAAAAGAATCACATGACTGGGAGAAGCGCTTTTAGGCCTCGTAAACTGCGATCATCCGTGGCCATTTGGCACGCTCCTCCCTCGCTTTTTTTTCGTTCTCACACCTCGCTCTTCCTCCTGCAGCCCGGCCTTGCTGGTCAAGCACAGAATTCTGGGAAGTGTAGTTCTGAGAcggagagaggcagaggtaaaCTGTGCCTGGGCCTTGCCCCCTAGTTGTCTTGGCTGtctctttttcatttcatgCGTGTGCTGCTCTGTCACTGATTTCAGTCTCGCGCAAAATCTGTAAAAAGGCTATTTGCAGCAcctccaccccccctcccctccgcCCTTTCCTCTCATTTAAGAGTCTGAGGGGTAAAGGAAGGGTTTGAGGGGcgccaacccccccccctcaacATTTTCACCAACTctgctttattaaaaaaaagtctacatATCCAAGGCCAGAGCACCGGAGGCTGCTATTCTTCTCCTCTCCTGCCCTTATCCCTCGCTTCCTGTGGTCGCTAGCACCAGTCGTCCTCGTCCGTCTCGCTATAAGGTTCATGCAGGCCCTTGCGGGGCCCTCGGGCGTGGGGGGGGCGGTGGTGTGGATGGGGGGGTGCCCCGGGGGGCCCCCGCCGATGTGGGGAAGGTGAGGATGAGCGGTAGCCATTGGGGACCCTGCGTGGATGCGGGTGAGGGGGCGGAGGGGGCCCGTGGCGGGCAGTCCTAGGCGAGCGCGGGTGAGGATTTCCCCCATGTGGGTGCGGGTTGCCGTGGGAGAGGCTTTGCTCGTAGGCGGGGGGCTCATGGTGCCGCTCGTACTCGTAGTCACGCTCGTAGAAGGGTCCGTCGCCCTCCAGGCTGTCCCCGGGCGGGGGCCCGCTCCAGCGGCCTCGGTGAGGGGACCTGGGCGAGCCGTGGAGGGGCGAGCGCGGGGACTGGTGCCTGGGGGAGCGCGGCGAACCGTGCCGGGGCGGGGATGCCCCGTGGTGGGGAGAAACCTGGCGCGAAGGGGGTCGGTGGTGGTAGCCTCTGTCGTGGTCTGGCGGGGAGAAGTGTCTGGGGGAGGGCGAGCGCAGACGGCCCGGCCCCGGGGGGCCGTAGCTGGGCTTGCGGACAGTAGGGGAGTAGGTGACATGCGGTCGGGGTACAGCAGGGGTCTGGGGTAGCTGGCGACGCCCTCTCCGCGGAGTGCTGGTCCCCGAGGTGGAGGGGACCGGGCTGCCGCTCACCGAACTACTGCCCTACAGCAAAATGTAAACAAGGAAAATCAAaacgcaccacaacaacaacaacagagaccaGAATAGATAGAGTGGCGgtggtagatagatagatagatagatagatagatagatagatagatagagagacagacagacagacagacagacagacagatagatagatagatagacaccATTGAAAATCATTCAAAAACAGTGATGAGGCAAAAAATTGACATCAAGAAGCAACACGTCACATTGAAGAAaaatggacagagagagaaacagtgataaagaaaaagcataacacaaaaaaaagagagattgaTATACATAAGTTGGTGTATGACTTTCTG

Function

NR:

description
PREDICTED: voltage-dependent P/Q-type calcium channel subunit alpha-1A-like isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4974 True 5615 TUCP 0.49 2 10899558 10905235

Neighbor

gene id symbol gene type direction distance location
wdr83 wdr83,LOC102798015 coding downstream 244492 10647077 ~ 10655066 (-)
ccdc130 ccdc130 coding downstream 267831 10625324 ~ 10631727 (-)
LOC120567745 LOC101486982,LOC102213734 coding downstream 275543 10579285 ~ 10624015 (-)
LOC120567750 LOC103370659 coding downstream 327788 10497323 ~ 10571770 (-)
LOC120565745 NA coding downstream 717571 10172085 ~ 10181987 (-)
ier2b NA coding upstream 19436 10924671 ~ 10926308 (-)
man2b1 man2b1 coding upstream 117359 11022594 ~ 11047950 (-)
LOC120555815 LOC103383434 coding upstream 148752 11053987 ~ 11076146 (-)
gtpbp1l LOC101485704,LOC102291158,LOC102198385,LOC103371799,LOC100709644 coding upstream 762292 11667527 ~ 11685699 (-)
LOC120555467 LOC103371801,LOC104957815,LOC100709917 coding upstream 789266 11694501 ~ 11696303 (-)
G3585 NA non-coding downstream 362 10898872 ~ 10899196 (-)
G3584 cacna1a,LOC104950333 non-coding downstream 2746 10895636 ~ 10896812 (-)
G3582 NA non-coding downstream 12941 10886286 ~ 10886617 (-)
G3581 NA non-coding downstream 13483 10885830 ~ 10886075 (-)
G3580 NA non-coding downstream 16146 10883147 ~ 10883412 (-)
G3573 NA non-coding upstream 10 10905245 ~ 10910163 (-)
G3579 NA non-coding upstream 41026 10946261 ~ 10965521 (-)
G3572 NA non-coding upstream 54720 10959955 ~ 10962207 (-)
G3576 NA non-coding upstream 63169 10968404 ~ 10969747 (-)
G3623 NA non-coding upstream 309840 11215075 ~ 11215274 (-)
LOC120559237 LOC103359075 other downstream 688254 9858080 ~ 10211304 (-)
G3373 LOC103359075 other downstream 857554 9840590 ~ 10042004 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other downstream 1259044 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other downstream 1331713 9525261 ~ 9567845 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 1991472 8905672 ~ 8908086 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other upstream 61127 10966362 ~ 10993201 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 1736778 12642013 ~ 12659983 (-)
LOC120561813 NA other upstream 1899267 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 1955049 12860284 ~ 12860355 (-)
trnac-gca_1 NA other upstream 1956459 12861694 ~ 12861765 (-)

Expression


Co-expression Network