G3572


Basic Information

Item Value
gene id G3572
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 10959955 ~ 10962207 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4960
ACCAGTAAAGGGGTGAGGGTTGGAGCTGTTTCAGACAGGGTTCCTACACACATCTGGAAAATTGACATGAAGTGAATTCTgatcatttttgtctttttttattaatttttttttatattttaagaatCCCAGAAATCCCTAAAATCACTGGGGTTCGATCCCCCACCAGGCAATTTGACGCTCAGTTGGTTCAGCGTCAGTCCAAATAAGCACAAAACGTTTCGGTACGACAAGTCAAAAAGTTAGTCTTTAGAACGCGCTCTCCGGCTGATAATCGGCCGGACGTTTCCCGTCCGATCTCAAAAATCAACGAAGGAAGCAAAGACGGACGACTTCAACTGTCCTTTCGGCTATCGTACAGTCAGACGCTCGTGGGCTTTGACGTGCACGGTCACCTCGACTGCGTGAACAAATGTATGCTCTGGTTGACGGCCTTGTTGCCCTTTTTGATTTTAGACAAATGTTTGAATCCAGtccaaaatgttaaaagaaaaatccaCCCTCAAACCCTTGGAACACTAGTTTTAGAAATCACATATGTGGGTGTTTTGTCTCCCTTGCGCTAAAGCTGCTTTGGCTTATTTTTTTGGGCCACTCAAGGGGGGGGGCACATCCAACACGTCCAGCTACCACAGAAAAGTTAGCATTCGTTGGACATCGCGTTTCTGGCCAACCTGACGAAACCAAGtccaatattctctctctcctttaagCTCCGTGTTTGGTCTCCACCCACTCCCTAATGAAGaaatctggctctttagctgcaaaacgctccactatgttcaccaactagtgtttttttttttgggaaacaaAGAGGGTGGATTTTTCTTGTGTGGGGACCCTGCTGAAAATCAGGAGTTGTGTCGTaaagtgtgcaaaaaaaaagaaaagaaacaaaactggCTAAACTTGAGAACAGAGGAGCGAGGGAAGTGGATTCAAGACTCGTTTATCGTAATCCTGAGGCGAATCCTCGTCGTTTATTTCTCCACTCTCCATCCCTTCGTCTCCTGCTCAGCCTCCTTCCTCCTCGTGTTCCTCGCCTCGCCGCGGCCTGACCTCATCGACCCGAGCCCCGGCCTTTTGCCCTTCGCGCTCCCCGAGCGCCGCGCATCTCTTTTCCTCCGCTCGTTCCCAAATCCCCACACACCAGAGacgagacaacacacacacacacacacacatatatgcttATTAAttaaccaacacacacacacagattatgtataaatgaatacaaaacGGGCAAACCTCTGAGATACAGAAGCtcgcacacacacctgcagactCCCAGGATGTGTAGCAGGGCGTGTGCGTCTTCGTGTCActgatgcagttttaaaaaaaaaaaaagaagaaagaaataagTACCAGTTTACCTCGGGAGCTCTCAGCCATAGCAGACCTTTAATGGCCACAGATATCTCAGCGTCTCAACTGCTGTGGCTGCCATTACAAAGCAGGTACAcgctttttattttatagttttttgtttttggttgtttttcagGAACCAACCCCCCAGGAGCCTCAGCAGAGCGCTCTGGGACCAtttgaatgcacacacacacacacacacacacacacacacacagcgcagggTTTTTACAGAAACGGGGACGCAAGCAGAGAGTCCACGTCAACACAGTCTTACCTCAGAATTCTATTACAGAACAGGGGCGGGGTGTGGgaggtttgggggggggggcttacaTATGATCATAGCAAACGTGAATGACTATTTTTTATTCCTTCTCTTCCTTGTCTCTGGTGTCGTCGGGTGaaactataaatatataaatatataaactgTACATTATGACATAGAAGCACTATTGAAGTCTGATTGTTAGATGTGCACTCGCAGCATGAGGTATTATTCTTTATTATTCTTCATAACCCAgtaaaatggaagaaaaaaaaaaaaaggtgatgtAACAGCTTTTGGAGgtaaacaagaaaaaaggatacaaaaaacccacaaaaatgCAGTAGCATCTACTGATATCAAAGAGAAATACCCGACCTTACCCcagccatgcacacaca

Function

NR:

description
PREDICTED: zinc finger protein basonuclin-2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4960 True 2055 lncRNA 0.33 3 10959955 10962207

Neighbor

gene id symbol gene type direction distance location
ier2b NA coding downstream 33647 10924671 ~ 10926308 (-)
wdr83 wdr83,LOC102798015 coding downstream 304889 10647077 ~ 10655066 (-)
ccdc130 ccdc130 coding downstream 328228 10625324 ~ 10631727 (-)
LOC120567745 LOC101486982,LOC102213734 coding downstream 335940 10579285 ~ 10624015 (-)
LOC120567750 LOC103370659 coding downstream 388185 10497323 ~ 10571770 (-)
man2b1 man2b1 coding upstream 60387 11022594 ~ 11047950 (-)
LOC120555815 LOC103383434 coding upstream 91780 11053987 ~ 11076146 (-)
gtpbp1l LOC101485704,LOC102291158,LOC102198385,LOC103371799,LOC100709644 coding upstream 705320 11667527 ~ 11685699 (-)
LOC120555467 LOC103371801,LOC104957815,LOC100709917 coding upstream 732294 11694501 ~ 11696303 (-)
zgc:92360 LOC103371798,LOC103383438,LOC100707756 coding upstream 734823 11697030 ~ 11721842 (-)
G3573 NA non-coding downstream 49792 10905245 ~ 10910163 (-)
G3585 NA non-coding downstream 60759 10898872 ~ 10899196 (-)
G3584 cacna1a,LOC104950333 non-coding downstream 63143 10895636 ~ 10896812 (-)
G3582 NA non-coding downstream 73338 10886286 ~ 10886617 (-)
G3581 NA non-coding downstream 73880 10885830 ~ 10886075 (-)
G3576 NA non-coding upstream 6197 10968404 ~ 10969747 (-)
G3623 NA non-coding upstream 252868 11215075 ~ 11215274 (-)
G3667 NA non-coding upstream 582288 11544495 ~ 11594738 (-)
G3684 NA non-coding upstream 671669 11633876 ~ 11634078 (-)
G3687 NA non-coding upstream 701874 11664081 ~ 11664305 (-)
G3586 LOC104950333 other downstream 54720 10899558 ~ 10905235 (-)
LOC120559237 LOC103359075 other downstream 748651 9858080 ~ 10211304 (-)
G3373 LOC103359075 other downstream 917951 9840590 ~ 10042004 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other downstream 1319441 9508604 ~ 9640514 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other upstream 4155 10966362 ~ 10993201 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 1679806 12642013 ~ 12659983 (-)
LOC120561813 NA other upstream 1842295 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 1898077 12860284 ~ 12860355 (-)
trnac-gca_1 NA other upstream 1899487 12861694 ~ 12861765 (-)

Expression


Co-expression Network