G5616


Basic Information

Item Value
gene id G5616
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17781780 ~ 17782013 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU7604
GAAAGAAGAGGCGGATGTGTGAATGACCTCAGTGTGCACCTCTCCCTCCGCCTGCTGTcagcagttgtgtgtgtgtgatgctttCCCTCCTTACTCAGGAAGAGCAAGAATGGATGGAATgtcccctcccacacacacacacacacacacacacacctccatccCAAGAGTCAAACCATGTGTGGTGTACTACTGAGTAAAAAACAACCGTAAATGTTTTATGCCTGACAAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7604 True 234 lncRNA 0.49 1 17781780 17782013

Neighbor

gene id symbol gene type direction distance location
LOC120560193 NA coding downstream 2503 17773284 ~ 17779277 (-)
LOC120560200 NA coding downstream 13605 17766923 ~ 17768175 (-)
LOC120556506 NA coding downstream 17971 17757669 ~ 17763809 (-)
LOC120560159 NA coding downstream 27298 17693557 ~ 17754482 (-)
LOC120562183 tekt4 coding downstream 99996 17677670 ~ 17681784 (-)
LOC120563097 LOC104965080,LOC103373413,LOC102785880,LOC100703819,LOC102203376 coding upstream 576 17782589 ~ 17788980 (-)
b3gntl1 b3gntl1,LOC105924764 coding upstream 12339 17794352 ~ 17812575 (-)
tecrb tecr,LOC107390378 coding upstream 757650 18539663 ~ 18552834 (-)
tmed1b LOC104964575,LOC104925388,LOC103362227,LOC101073760 coding upstream 842095 18624108 ~ 18629125 (-)
LOC120571862 NA coding upstream 864146 18646159 ~ 18648400 (-)
LOC120560178 NA non-coding downstream 41933 17738072 ~ 17739847 (-)
G5608 NA non-coding downstream 47029 17703216 ~ 17734751 (-)
LOC120560186 NA non-coding downstream 81391 17699260 ~ 17700389 (-)
G5522 NA non-coding downstream 136115 17617187 ~ 17645665 (-)
G5506 NA non-coding downstream 168572 17557841 ~ 17613208 (-)
G5638 NA non-coding upstream 70651 17852664 ~ 17852981 (-)
G5666 NA non-coding upstream 185314 17967327 ~ 17968130 (-)
G5679 NA non-coding upstream 219412 18001425 ~ 18003156 (-)
LOC120563150 NA non-coding upstream 223222 18005235 ~ 18008724 (-)
G5716 NA non-coding upstream 237610 18019623 ~ 18024037 (-)
LOC120560175 NA other downstream 67882 17710639 ~ 17713898 (-)
LOC120569099 NA other downstream 360682 17412053 ~ 17421098 (-)
LOC120558720 NA other downstream 1433858 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 2096141 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2877551 14901146 ~ 14904229 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 35494 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 53891 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 97855 17879868 ~ 17881759 (-)
G5930 LOC102307335,LOC101466373 other upstream 1102955 18884968 ~ 18890220 (-)
mcrip2 mcrip2,LOC104963804 other upstream 1189957 18971970 ~ 18982318 (-)

Expression


Co-expression Network