LOC120558883


Basic Information

Item Value
gene id LOC120558883
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8358561 ~ 8363673 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800214.1
GTTGTATCAGCATGAAAACTCTAACTTCTCTCCTGGACTTGATTAATATGAAGACTCTTGTAGCTATTTTGCTGTTTTCCAAAACTACCTTGGGAGAGCATCGTCTCACCTGTCCTCAGACCATAGAGGCAGCAGAAGGAGATGATGTCATTATACAGTGTGGTCTGGACCCCCCCGTCGACTTGTCATTCTACACCTTCGATGTGGCGAGACTCGACCTCAGCAGCTATGGTGATGTCCACTGCTATCGACGGGGAACGGATCACCTGGATGACCAGATGGATCGATACAGAGACAGAACAACTCTCCACCATGAAGACCTGATCAGAGGCATCGTGACTCTGAAGATCTCCTCAGTAACTCTGTCTGATAGTGGTCCATATAAAGTCTACGTCCCAGACCTGACAGCCCCTTCTGTTATTAACATCACTGTTGTACCCAAAGGCCAAGTGAGCGAGACGAAGAGAAATGATCCAACCACAACTAGacctccagctaccagtcctgGCTCTGCAAAGGAGGAATCTGACTGGAAAACAGTGGTTCCCATTGTCTGTGGTGTTGTtggtgttcttcttcttctcctggtGAAACGTGGAGTCATCCagAGTTGCATCGAGAGGCtcagaggaaggaaggagcaaGAACCAGAGACAGCAGGGAATGGATGTGAGATGAAAAACCTGAACATGGAAGCAGCAAAAGGAGATGAAGACCTGGAGAGAGCTGCAGGAAATGGAAACGTCTTACTGTAGGAAACCTCTCTGAGAGCTTgaattcaactttatttatattatcaaatactaacaagagttatctcaggacactttacagatagagtaggtctagaccacactctatagtttataaaaagccccaacaataccagtaattcccccaagaccCAACAATGACAGATGCAGTATTAGAATAGATGCAGATAAAGGTTTTACACAACTCAGACACAACCTGGATCATAATAAGGAGTCCTTTTGGTCCTGATTCAGTATTAGAAAAGGATCTTTACATAAATCTTCTGAGCTGGTCAACAATAAGCCCCCGAACAAAATCATATTAACAACATCCAGGATGGTTTATTACACGGCTGCTCACTAAAGAAATcaaacattttacacattttacacaaatattgatttaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800214.1 True 1161 mRNA 0.44 5 8358561 8363673

Neighbor

gene id symbol gene type direction distance location
LOC120558897 NA coding downstream 26235 8298581 ~ 8332326 (-)
LOC120558865 NA coding downstream 42367 8304708 ~ 8316194 (-)
LOC120558849 NA coding downstream 65435 8164960 ~ 8293126 (-)
cdc6 cdc6,LOC102777898,LOC104942167 coding downstream 263298 8079222 ~ 8095263 (-)
taf5l taf5l coding downstream 379104 7969350 ~ 7979457 (-)
LOC120558917 NA coding upstream 70958 8434631 ~ 8444233 (-)
LOC120558891 NA coding upstream 86265 8449938 ~ 8457347 (-)
c1h6orf120 clg6h6orf120,LOC101075423,LOC104933027,LOC103359067,LOC102197258,LOC101473941 coding upstream 148572 8512245 ~ 8517252 (-)
npepps npepps,LOC102793525,LOC107098842,LOC108244358 coding upstream 156262 8519935 ~ 8562298 (-)
gpr179 gpr179,LOC107098834 coding upstream 211560 8575233 ~ 8606773 (-)
G2849 NA non-coding downstream 252 8304385 ~ 8358309 (-)
G2812 NA non-coding downstream 60559 8288586 ~ 8298002 (-)
G2808 NA non-coding downstream 61397 8218051 ~ 8297164 (-)
G2846 NA non-coding downstream 129294 8228973 ~ 8229267 (-)
G2842 NA non-coding downstream 132600 8212917 ~ 8225961 (-)
G2860 NA non-coding upstream 18668 8382341 ~ 8383076 (-)
G2862 NA non-coding upstream 28683 8392356 ~ 8433901 (-)
G2815 NA non-coding upstream 32246 8395919 ~ 8432724 (-)
G2874 NA non-coding upstream 100016 8463689 ~ 8464787 (-)
G2878 NA non-coding upstream 141461 8505134 ~ 8518597 (-)
G2840 NA other downstream 149026 8207252 ~ 8209535 (-)
capn9 capn9 other downstream 400940 7935940 ~ 7957621 (-)
G2752 NA other downstream 594613 7739824 ~ 7763948 (-)
akt3b akt3,LOC103470003,LOC103150748,LOC100692017,LOC108246299,LOC101174244 other downstream 667974 7648842 ~ 7690587 (-)
LOC120569296 NA other downstream 986003 7331956 ~ 7372558 (-)
wipf2a NA other upstream 72126 8435799 ~ 8501162 (-)
G2938 LOC107098689,LOC103359055 other upstream 394976 8758649 ~ 8767973 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other upstream 541999 8905672 ~ 8908086 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other upstream 1144931 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other upstream 1161588 9525261 ~ 9567845 (-)

Expression


Co-expression Network