LOC120558891


Basic Information

Item Value
gene id LOC120558891
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8449938 ~ 8457347 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800227.1
CTGGTTTTAGTTATTTTCCCGGAAACCTTACCACGACGTAGTGGACGAAAACAAGTTTTAATCATCTTTTAATAATGACCGTGACACAGCTGGTAGCTCTACTGATTATCTTACCGATCGCTGCGGGAGAGCATCGTCTCACCTGTCCTCAGACCAAAGAGGCAGCagaaagtcatgatgtcattaTACGGTGTGGTCTGGACCCCCCCGTCGACTTGTCTGACTACACGCTGGATGTGGCGAGAGATGACCTTGATATCAATGATAATGATGTCTACTCTTATCGAAATGGAAAGGACCAACCAGATGATCAGATGGCTCGATACAGAGGCAGAACAACTCTCAACCATGAAGACCTGATCAGAGGCATCGTGAAGCTGAAGATCTCCTCAGTAACTCTGTCTGATAGTGGTCCATATAAAGTCTTTCTCATAAAGCTGGGAGCCCATTCTGTTATTAACATCACTGTTGtTTCCAAAGACCAAGCGAACAGGACAAAAGGAATTGATTCCCCCACATCTGGACCTCCAGTGGGAGAAGAGACAGAGTCAGACCATCGGGACTCTGCAAAGGAGGAATCTGTCTGGAAAATAGTGCTGGGCTGTGTCTgtggtgttgctgctgctgttgttgttcttcttctcctgGTCAAACGTGGAGTCATCCGGATCTGTAAGAAGACGACAGAAGCCGCGACGAGGCCAAACAACTTTATAGTGAGATACCTGAGCACCCCGACAACCGAGGATAACGTAGACCCACACAGCGCTGCAGAACACGGTCTGAGAGAGTTGGTGGTCTGAGAGAGTTGGTGGTCTGAGAGAGTTGGTGGTCTGAGAGAGTTGGTGGTCCGAGACGATACCCAGTCATCCCCTCAaccataaaaacatccaaactgCACCAGCTTAAGGAAAGCTTTTTACTCAACAACAGCAAAGTCAATCTAATTACAAAGTAAAATATCACGAGTAACACATTTTacaatcagacagacacacacacacacacacacacacacacacacacacacacatatatacatactttaTTGGTCATCCAGAAAAGTGCGACACCTTCTGTCCTTTTGGCCTTTGATTCAGATTAGAAAAAAACTCCAAAAGAAACGGTAGAAACCTGAGGAAGAGACACTGAGGAGGGATTCTACTCTCTGGGTGGATGGATGTCATGTGTACAGAATGACCAAAGAAATTAACCGTTAAGGTCTTTATAGACAAACGGGAGAAGcttaaaatcaaatctgaaCTGTAACCATGGTAATGATCATCTCATCTGACTCTCATCTGAGCAAATAAGCTTATTTCCTAAATGTCTActtctttttaaatgactttatgTGCTCACAGGGAAAAACGGAATCACTTTCTAGAGCAGGGGTTTTCaaactttttgtgtgtgtggactagagctgggcgagaaaatctaatatcacgatatttttgaccaaataccttgatatcgataccgcaacgatgtagtgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800227.1 True 1501 mRNA 0.44 5 8449938 8457347

Neighbor

gene id symbol gene type direction distance location
LOC120558917 NA coding downstream 5705 8434631 ~ 8444233 (-)
LOC120558883 NA coding downstream 86265 8358561 ~ 8363673 (-)
LOC120558897 NA coding downstream 117612 8298581 ~ 8332326 (-)
LOC120558865 NA coding downstream 133744 8304708 ~ 8316194 (-)
LOC120558849 NA coding downstream 156812 8164960 ~ 8293126 (-)
c1h6orf120 clg6h6orf120,LOC101075423,LOC104933027,LOC103359067,LOC102197258,LOC101473941 coding upstream 54898 8512245 ~ 8517252 (-)
npepps npepps,LOC102793525,LOC107098842,LOC108244358 coding upstream 62588 8519935 ~ 8562298 (-)
gpr179 gpr179,LOC107098834 coding upstream 117886 8575233 ~ 8606773 (-)
si:dkey-23f9.4 NA coding upstream 274721 8732068 ~ 8739288 (-)
ptp4a1 ptp4a1,LOC107563655,LOC107597142 coding upstream 318675 8776022 ~ 8786666 (-)
G2810 NA non-coding downstream 3786 8252660 ~ 8446152 (-)
G2862 NA non-coding downstream 16037 8392356 ~ 8433901 (-)
G2815 NA non-coding downstream 17214 8395919 ~ 8432724 (-)
G2860 NA non-coding downstream 66862 8382341 ~ 8383076 (-)
G2849 NA non-coding downstream 91629 8304385 ~ 8358309 (-)
G2874 NA non-coding upstream 6342 8463689 ~ 8464787 (-)
G2878 NA non-coding upstream 47787 8505134 ~ 8518597 (-)
G2882 NA non-coding upstream 71602 8528949 ~ 8529762 (-)
G2892 NA non-coding upstream 183956 8641303 ~ 8642482 (-)
G2894 NA non-coding upstream 186848 8644195 ~ 8645191 (-)
G2840 NA other downstream 240403 8207252 ~ 8209535 (-)
capn9 capn9 other downstream 492317 7935940 ~ 7957621 (-)
G2752 NA other downstream 685990 7739824 ~ 7763948 (-)
akt3b akt3,LOC103470003,LOC103150748,LOC100692017,LOC108246299,LOC101174244 other downstream 759351 7648842 ~ 7690587 (-)
LOC120569296 NA other downstream 1077380 7331956 ~ 7372558 (-)
G2938 LOC107098689,LOC103359055 other upstream 301302 8758649 ~ 8767973 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other upstream 448325 8905672 ~ 8908086 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other upstream 1051257 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other upstream 1067914 9525261 ~ 9567845 (-)
G3373 LOC103359075 other upstream 1383243 9840590 ~ 10042004 (-)

Expression


Co-expression Network