LOC120567388 (LOC100712387,LOC102193985,LOC102310568,LOC101487876)


Basic Information

Item Value
gene id LOC120567388
gene name LOC100712387,LOC102193985,LOC102310568,LOC101487876
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 18705404 ~ 18710720 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814348.1
acagtacacaaacacacaggcacacaggagCAACCTCTGCCCCTGAATTATAGCACTGACACACCTCCAGCTATCTGTAATCTCCCTTAGTTGTCCACAGAGTGCAGGGTAAAGAAATTGCAGAAAGAGGGGTGAAGAGGCAGTGAAAGGTGCCACTGACATAACAAACGTCACAGGATTTAAAGGAAGAAGGAAAACAAATCAAAGGAACAACACAATGGCttgaaagagaggaagaactggatatatttctttctttatagGAGTCGAGGAATTTCAAAGTGAGAGGGCCTTTTTATCCTTTCTTTCATCATGGTGGACCTGTTCCTAGACCGAGTTCTGGTGGAGAACAACTGGGACCAGGATGAACTCAACACGGAGAGAGAGATCATTGGGATTATCGAAAACCGCGTCCTGATGCTGTTCTTTGCATCGGCAGAGTGCGTCAAGTGCCAGGAGTTCCTGCCTGTTCTGAATGACTTTTTTAAGAAACTGAAAGATCCAGCATACATTGAATACCCCAAACTGCTCGCACTCATCTATATCAGCTTGGACCAATCGGAGGCACAGCAGGAGAGAGTCCTCAAAGAGCTGCACaaaaaggttttgtttttggcCTTTGAGGATCCATACAGGACAGAACTGCAGGCCAAGTTTAAGGTGAAGGATGTACCAACAGTTGTGGTCATTCGTCCTGATGGCTCCATCCTCTCTCCAAATGCTGTGCAGGACATCTGTCGTTTCGGTTGTGACTGTTTCCGTAACTGGCAGGAATCAGCAGAGCTCATTGAGAGGAGCTTCATGCTCAATGAGGAGTTTGAAAACCTAAATATGCGTAGTGCCACTGACCCCGTGAGGAGACTCAAGTACAAGACAGAGGACGacaagaggaaaaagagatggTGGAATTTATTGGGAAAGGGCAAAGACGAAAgtcaagaggaggaggagaaagatggAACGCGCaatggaaagagaaaagagggagatAAAGTAACTGGGAGGAgaagatgaagagaaagaaTCAAAGAAAAAACAGTGTTTTGTGTTGGTTGTCTTCAAGTCAAGCCTCGTAAATACTTAATCCTTTGTCACTGATACTGCAGCCACTTCAGAGGCTCTGTAAGAAACATGTGGCAATGGGATGTGcagtaaaattaaattaaaaaacaaaaaaagcccaCTGAAAAGAGCTCCTGCTGGTATGTAGAAGCTACTGTGCCTCTCTGCACAGATCACACAAAACTTTGAAAGGAATGAAATAAGATTGAGTTGCTCTAATATGTTATAAATATgctacaactactactactactactgttacTACTGATAACtattatatatttaactatTATCCAGTCCAGTCTTATTACTTTGTCAATTAATGACTAAAGTTAACTAAATACGATAATTAATATTTCAGTCATCAGAGCAAATGTCACTGTTTTCAAACagaaacatacatatacatgtacagtatcCTACATGTCTAAAATAATTTCTGCCTATTTATGAGCACCAGAATCCCACTTTAATTTCTGCCAAGTAATTCAGGTCACATCCACTCCATTTCAAGCAGCATCAGGCAAAACATAATCAGTAAATACTGTAATCAACAAACTGTACATTACCTACCCAGCAACAAATGGCAGACAATATTAAAAGTTAGAGAAGAAAGTCAAACATATTGCAGCTAGAGACCCACATATTTTTTCTCATGAGTTGTtggagaccaaaccagagctaaaaggagtGTGAATATTTACTTATGTTTATCAAGTGGCCAGAAACACAATTTCAAATGAATGTTAATATTGCTGCTGGTTGTGTAAAAAAAGTTCACTAATAGGCCTACATCGTTTTAATATGTTATGGCTGTGTGTTTTTCAGCTTTTTGTGGAGTTTTTATGCCCTCAAGTGGtcaaaaaaacagttttaaaggtgcaatatgtaatactgataataataaaattctCAGCTTACAATTatggtaggaaccgctaaaacctcaacaacctcaccgtcctctctggctgacggacagacacacttccttggcttagaattacggtaggaaccactaaaaataccactaccttgccatCCTTTTCCACCCGACTAAaatacacactttattggcttagaattctggcaacaatcgctaaacacactgcaaactcacggtcctctcctcccgatttacagcccccctctcttggctttaacaaactcaccgttgtcggctactGCCGCTGAACAGACTACaagttgtaaacagccgtggcccacATGCCTGGTCCTCTAGTAAcgttatctaacgttagcagttatggcatgttagcatggcggcgttagccaggaccattcgggatcactttactggttGTGTCTCAATTGTAACCAACTTGAGTACTACTTAATTCAATCTGTGTACACGAATGTtacaatgacataaaatgcctgtcccttgtagccgtgataaattagcctgaagctaatgcttacctgttcaggaggaaataagccaactctgcatccttttgggctctaagctgtctccatctttcaaatacatctccaatatttacccagggTTTGTTACGTCTTGTTGATCCCGttcatttgtttgctgcttccatggctgtactacAGCTGTAGCGCATTGGGTttgcgtttttacaggtatatctggcaacccggctggctgtcaaactgggcagttgttACCAACACAAAGGCCAAAACACAATCAGAAATTCCGTCATGGAACGAAAATTATAAAAGGAGAAAATattggcattagcattgttgtcagaaaagatagtatttcaacttagcatgtttcttTAATATCTGACGAtacattggggtcatttttgtatttattacagtaaatatattacattttgcACCTTTAAACTAAATTTATGCTGGCGCCTGCTGGTGTTTTCAAATTgaaatcaatattttgtcaagcactgtgtgtatgttgtttatgttattcatttcattatatTTGCCATGTTAATTATGGCATGTCTCTTGAGCAAATGTTGTATGTTAAATATAAGTTGTATTGATCTCCAAAAACAATACATTCTCTTTCCTGCTAATACAAACTGtaggctgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggggggggggctgtggcttcacactacacacacacacacacacacacactgcgcaCTTTATGTCTCTTGTCCCTCTGTCACCTTGTCTTTCAATCCCTCCCTCCCAGACAGAGGAGGGGAGGTGGAGCGCAGAGACACAAAGGAAGAGGGAGTGAGTAGCTACTGCCTTCAAGGTGAAGGAAAGACAGTCAATGAGTGAACGTGACATAAACTGACAGGCTGTGAACTGATTCAAGTACGACCCAGGAGGAgttgaaaagaagaagaaaaaactataTTTTGAAAGCTGTTTCCTTTTTGGATCAAGGGGAGATAACATTTGTGAGAGGTACAGTAAGCAACTGTAAGGATTATCCGATTTAACGGCAAGCAAGATGGGCTCAAGATGGGCTCATATGATTAAtggtttgttattgttattgtggaAACATACTGTCTAATTCGTAGGGTTATCAAATCATGCAGTATGCAAGATAGACCTAAATGCCAAAACTTTCTCAAACCTTCTCATGTGTGTTCTGTGCTTTCTTCATGTTTGGCATGTGCATTTGAAAACCCCTTTACAAGta
>XM_039814356.1
acagtacacaaacacacaggcacacaggagCAACCTCTGCCCCTGAATTATAGCACTGACACACCTCCAGCTATCTGTAATCTCCCTTAGTTGTCCACAGAGTGCAGGGTAAAGAAATTGCAGAAAGAGGGGTGAAGAGGCAGTGAAAGGTGCCACTGACATAACAAACGTCACAGGATTTAAAGGAAGAAGGAAAACAAATCAAAGGAACAACACAATGGCttgaaagagaggaagaactggatatatttctttctttatagGAGTCGAGGAATTTCAAAGTGAGGTAAATTATTTGTGGCATATGCAGCTGCCAGAGCACGTACAAAGATTGATGGCCTATTCAATTCGCAACTAACAAAACAAGGCAGTGTCACTAGTATATATCAGGTACGATCGATCAGCTCCAAAAAGTGAACCGGATTATTGTGAAATAACTTTTCCAAATGTAGGATTTAGGCTCTAACCTTTCAGAGTCTCCCAGTAAATCCTCCTTCTGTTTTTTCCAGAGGGCCTTTTTATCCTTTCTTTCATCATGGTGGACCTGTTCCTAGACCGAGTTCTGGTGGAGAACAACTGGGACCAGGATGAACTCAACACGGAGAGAGAGATCATTGGGATTATCGAAAACCGCGTCCTGATGCTGTTCTTTGCATCGGCAGAGTGCGTCAAGTGCCAGGAGTTCCTGCCTGTTCTGAATGACTTTTTTAAGAAACTGAAAGATCCAGCATACATTGAATACCCCAAACTGCTCGCACTCATCTATATCAGCTTGGACCAATCGGAGGCACAGCAGGAGAGAGTCCTCAAAGAGCTGCACaaaaaggttttgtttttggcCTTTGAGGATCCATACAGGACAGAACTGCAGGCCAAGTTTAAGGTGAAGGATGTACCAACAGTTGTGGTCATTCGTCCTGATGGCTCCATCCTCTCTCCAAATGCTGTGCAGGACATCTGTCGTTTCGGTTGTGACTGTTTCCGTAACTGGCAGGAATCAGCAGAGCTCATTGAGAGGAGCTTCATGCTCAATGAGGAGTTTGAAAACCTAAATATGCGTAGTGCCACTGACCCCGTGAGGAGACTCAAGTACAAGACAGAGGACGacaagaggaaaaagagatggTGGAATTTATTGGGAAAGGGCAAAGACGAAAgtcaagaggaggaggagaaagatggAACGCGCaatggaaagagaaaagagggagatAAAGTAACTGGGAGGAgaagatgaagagaaagaaTCAAAGAAAAAACAGTGTTTTGTGTTGGTTGTCTTCAAGTCAAGCCTCGTAAATACTTAATCCTTTGTCACTGATACTGCAGCCACTTCAGAGGCTCTGTAAGAAACATGTGGCAATGGGATGTGcagtaaaattaaattaaaaaacaaaaaaagcccaCTGAAAAGAGCTCCTGCTGGTATGTAGAAGCTACTGTGCCTCTCTGCACAGATCACACAAAACTTTGAAAGGAATGAAATAAGATTGAGTTGCTCTAATATGTTATAAATATgctacaactactactactactactgttacTACTGATAACtattatatatttaactatTATCCAGTCCAGTCTTATTACTTTGTCAATTAATGACTAAAGTTAACTAAATACGATAATTAATATTTCAGTCATCAGAGCAAATGTCACTGTTTTCAAACagaaacatacatatacatgtacagtatcCTACATGTCTAAAATAATTTCTGCCTATTTATGAGCACCAGAATCCCACTTTAATTTCTGCCAAGTAATTCAGGTCACATCCACTCCATTTCAAGCAGCATCAGGCAAAACATAATCAGTAAATACTGTAATCAACAAACTGTACATTACCTACCCAGCAACAAATGGCAGACAATATTAAAAGTTAGAGAAGAAAGTCAAACATATTGCAGCTAGAGACCCACATATTTTTTCTCATGAGTTGTtggagaccaaaccagagctaaaaggagtGTGAATATTTACTTATGTTTATCAAGTGGCCAGAAACACAATTTCAAATGAATGTTAATATTGCTGCTGGTTGTGTAAAAAAAGTTCACTAATAGGCCTACATCGTTTTAATATGTTATGGCTGTGTGTTTTTCAGCTTTTTGTGGAGTTTTTATGCCCTCAAGTGGtcaaaaaaacagttttaaaggtgcaatatgtaatactgataataataaaattctCAGCTTACAATTatggtaggaaccgctaaaacctcaacaacctcaccgtcctctctggctgacggacagacacacttccttggcttagaattacggtaggaaccactaaaaataccactaccttgccatCCTTTTCCACCCGACTAAaatacacactttattggcttagaattctggcaacaatcgctaaacacactgcaaactcacggtcctctcctcccgatttacagcccccctctcttggctttaacaaactcaccgttgtcggctactGCCGCTGAACAGACTACaagttgtaaacagccgtggcccacATGCCTGGTCCTCTAGTAAcgttatctaacgttagcagttatggcatgttagcatggcggcgttagccaggaccattcgggatcactttactggttGTGTCTCAATTGTAACCAACTTGAGTACTACTTAATTCAATCTGTGTACACGAATGTtacaatgacataaaatgcctgtcccttgtagccgtgataaattagcctgaagctaatgcttacctgttcaggaggaaataagccaactctgcatccttttgggctctaagctgtctccatctttcaaatacatctccaatatttacccagggTTTGTTACGTCTTGTTGATCCCGttcatttgtttgctgcttccatggctgtactacAGCTGTAGCGCATTGGGTttgcgtttttacaggtatatctggcaacccggctggctgtcaaactgggcagttgttACCAACACAAAGGCCAAAACACAATCAGAAATTCCGTCATGGAACGAAAATTATAAAAGGAGAAAATattggcattagcattgttgtcagaaaagatagtatttcaacttagcatgtttcttTAATATCTGACGAtacattggggtcatttttgtatttattacagtaaatatattacattttgcACCTTTAAACTAAATTTATGCTGGCGCCTGCTGGTGTTTTCAAATTgaaatcaatattttgtcaagcactgtgtgtatgttgtttatgttattcatttcattatatTTGCCATGTTAATTATGGCATGTCTCTTGAGCAAATGTTGTATGTTAAATATAAGTTGTATTGATCTCCAAAAACAATACATTCTCTTTCCTGCTAATACAAACTGtaggctgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggggggggggctgtggcttcacactacacacacacacacacacacacactgcgcaCTTTATGTCTCTTGTCCCTCTGTCACCTTGTCTTTCAATCCCTCCCTCCCAGACAGAGGAGGGGAGGTGGAGCGCAGAGACACAAAGGAAGAGGGAGTGAGTAGCTACTGCCTTCAAGGTGAAGGAAAGACAGTCAATGAGTGAACGTGACATAAACTGACAGGCTGTGAACTGATTCAAGTACGACCCAGGAGGAgttgaaaagaagaagaaaaaactataTTTTGAAAGCTGTTTCCTTTTTGGATCAAGGGGAGATAACATTTGTGAGAGGTACAGTAAGCAACTGTAAGGATTATCCGATTTAACGGCAAGCAAGATGGGCTCAAGATGGGCTCATATGATTAAtggtttgttattgttattgtggaAACATACTGTCTAATTCGTAGGGTTATCAAATCATGCAGTATGCAAGATAGACCTAAATGCCAAAACTTTCTCAAACCTTCTCATGTGTGTTCTGTGCTTTCTTCATGTTTGGCATGTGCATTTGAAAACCCCTTTACAAGta

Function

NR:

description
PREDICTED: nucleoredoxin-like protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814348.1 False 3743 mRNA 0.41 4 18705404 18710720
XM_039814356.1 True 3966 mRNA 0.41 4 18705404 18710720

Neighbor

gene id symbol gene type direction distance location
LOC120557593 LOC103362234 coding downstream 3195 18675408 ~ 18702209 (-)
LOC120571862 NA coding downstream 57004 18646159 ~ 18648400 (-)
tmed1b LOC104964575,LOC104925388,LOC103362227,LOC101073760 coding downstream 76279 18624108 ~ 18629125 (-)
tecrb tecr,LOC107390378 coding downstream 152570 18539663 ~ 18552834 (-)
b3gntl1 b3gntl1,LOC105924764 coding downstream 892829 17794352 ~ 17812575 (-)
LOC120563085 colgalt1,LOC102311502,LOC100712117,LOC103362237 coding upstream 2216 18712936 ~ 18726750 (-)
LOC120563090 NA coding upstream 16680 18727400 ~ 18736521 (-)
LOC120559642 slc27a1,LOC103362239 coding upstream 32849 18743569 ~ 18751991 (-)
LOC120559658 LOC104952753 coding upstream 41939 18752659 ~ 18766884 (-)
LOC120562921 LOC104952754,LOC103372004 coding upstream 73205 18783925 ~ 18787858 (-)
G5894 NA non-coding downstream 16359 18630276 ~ 18689045 (-)
LOC120545674 NA non-coding downstream 40897 18663944 ~ 18664507 (-)
G5809 NA non-coding downstream 117868 18584673 ~ 18587536 (-)
G5801 NA non-coding downstream 130073 18575017 ~ 18575331 (-)
G5800 NA non-coding downstream 131150 18574050 ~ 18574254 (-)
G5921 LOC103372008 non-coding upstream 125557 18836277 ~ 18857539 (-)
G5926 LOC103372008 non-coding upstream 164155 18874875 ~ 18875738 (-)
G5935 NA non-coding upstream 219536 18930256 ~ 18930500 (-)
G5954 NA non-coding upstream 245687 18956407 ~ 18956631 (-)
G5970 NA non-coding upstream 250492 18961212 ~ 18961997 (-)
LOC120556582 NA other downstream 823645 17879868 ~ 17881759 (-)
LOC120556682 NA other downstream 857367 17835904 ~ 17848037 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other downstream 869643 17817507 ~ 17835761 (-)
LOC120560175 NA other downstream 991506 17710639 ~ 17713898 (-)
LOC120569099 NA other downstream 1284306 17412053 ~ 17421098 (-)
G5930 LOC102307335,LOC101466373 other upstream 174248 18884968 ~ 18890220 (-)
mcrip2 mcrip2,LOC104963804 other upstream 261250 18971970 ~ 18982318 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other upstream 312496 19023216 ~ 19037081 (-)
G6084 NA other upstream 778868 19489588 ~ 19545927 (-)
LOC120569510 NA other upstream 1054173 19764893 ~ 19765387 (-)

Expression


Co-expression Network