LOC120574032


Basic Information

Item Value
gene id LOC120574032
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6494570 ~ 6507444 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824067.1
TGTGTAGATATGGCTGAAGCCAGTTGTCGACTGTCTGAAGTTCAGTTTCTTTGCcccatctgtctggatgtgttcactgatccTGTCACCACATCATGTGGACACAACTTCTGCAAAAACTGCATCACGGAAAACTGGAATACTAATGACCAGTATCTGTGTCCGATGTGTAAAAAGGTTTTCGACACAAAACCTGAGCTGCTCATCAACACTTTCATCTCTGGGATGGTTGCTCAGTTCAGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggcctcctactgtgagactcacctggagcctcatctgaCAATGTCAGGtctgaaaagacatcagctgatcgACGCTGTGGAGAACCTGGAAGGCAGGATGTGTACGAAGCACGATAAAcctctggagctgttctgtaagaccgaccagacatgtgtctgcatgctctgcCATGTTTCAGACCACAAGATGCATGATGTTATTCCTCTGAAAGAAGGATATGAAGAAAagaaggcagagctggaggctGAAATTCAGCAGATGATCCAGAAAAGACGACTGAAGATTCAAGAGATCAAACACTCAGTCAACCTCAGTGCGGAAGATGCAGACATagagatagcagaaggtgttcaAGTCTTCACTTTTCTAATGGAGTCTGTTGAGAGAGGCCTGAATGAGCTCATCAACAcgatcaaagagaagcagaaaacaacagaaaaacaggcccaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagctctcacgctctgaagaccacctccatcttctccagagtGTCCAGTCCCTAAACATCCAACAACCTCCACCCACCAAGGACTGGACAGAAGTCAGCATCCATCCATCAACCTATGAGGGGACTGTGGTGAGAGCTGTGGCTCAGCTGGAGGAAACACTCAGTGAAAACAGGAAAAAGCTACTTGAGtctgagctgaagagggtccAGCAGTATGCAGTGAATGTGAGTCTTGATCCTGAAACAGCACATCCTAatctcatcctgtctgatgatGGGAAACAAGTAAATCATGGTGATGTAAAGAAAAATCTCCCTGACAAACCAGAGAGATTTTCTAattgtctttgtgtttttggAAAGCAGAGTTTCTCAGAGCAGAGTTCCTCTTCAGGCAGATTTTACTTCGAGGTTGAAGTTAAAGAAAAGACTAAGTGGACTTTAGGAGTAGCCAGAGAGTCAATCAACAGGAAAGAGAACATCCCACTGAGCCCTGAGGATGGTTACTGGACTATAGGATTGAGAAATGAAAATGAGTACCAAGCTAATGCTAACCCTcctgtccttctctctctgaagtctcctcctcagaaggtgggggtgtttgtggattgTCTGGAGGGTCTCGTCTCCTTTTATGACGTagatgctgcagctcttatctactcctttactggctgctccttcactgagaaGCTCTACCTGTACCTCGGTCCTTGTCCTAATGATGGTGGTAAAAACTCTGCccctctgatcatctctcctgtcaATCGCACGAGACCGAGTAGaacaattatttgattttgtatGAAAGCAATTACCTTTAAATAAGAGTACATATTATTTGGTAACGGTCACTGTATTTTGGCTTTTTTCTGATTTATCTGGTTTTGGCTTTTTGGTATTATATCATATTTCAACGCATATAATCGGGTTCGTAAGATATCGTATGGAAACTTATGCACGCCCATCAATATGATCTCCTACGAATTTAGGTGTCCACCAGCTGGTCGTGTGACAACCTGGTTAAGTTTAGCGGCCTTTACAGTTCAATTTAGCCAACAAAAGGTTACTAGGAGTGGGCTTCAGAGCACCGTGAGCTGTCAGTCGTTTTAGAGGCTGCTGCTAGTTGAGTTTAGCAGACaaaaggtgactttgagccgggtacatggcatggaattacagtgctttagtAGTAATAGtcattacttttcgtagctatatgatatggctgcacaattaatcaaattccCACTATTAAATGAACATTATCACCTGCAATACTGATACTTAAAATGCATGCTCCGCTCATAATAAACTCTGCTGCATATCGAATTAAGCGCTTCGTAGACTGACAGCCAGCGACCAGGGGGCATTTGAGATGTTTTTGCTTCATTTTTGGTGAGCTGTCTGTGAAAAACTTTCCTGACTTCCTGACTGCTGCAGTCCAGAGTAGAACCGTAGCCTTGTTTTAACTATATTTTAAGTCACAACATGAAAGTGGAAGCAGTGCTCTGTTGATTTAAGTTTTTAAGTTTTAgtcaaattttatttatatgttgCTTCTAGGAGATCCACTGTAAATAAGGACCAGTCTTAATTTGATCCAAAATATTTGTACATTAGCAGGATTGTAGCTCAACATGGATGGAAAGCAGTgctctgtttatttaaatgtgaaagtgcaattaaaatattttgtccctaaaatcaatgaataatcataatctcaatat
>XM_039824155.1
ACTGAGTCTATTAAGTTTATTTTAACAACACAGCAATTTCTACAGCAAAGGCGCCGCCAAACACTGTGTGTAGATATGGCTGAAGCCAGTTGTCGACTGTCTGAAGTTCAGTTTCTTTGCcccatctgtctggatgtgttcactgatccTGTCACCACATCATGTGGACACAACTTCTGCAAAAACTGCATCACGGAAAACTGGAATACTAATGACCAGTATCTGTGTCCGATGTGTAAAAAGGTTTTCGACACAAAACCTGAGCTGCTCATCAACACTTTCATCTCTGGGATGGTTGCTCAGTTCAGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggcctcctactgtgagactcacctggagcctcatctgaCAATGTCAGGtctgaaaagacatcagctgatcgACGCTGTGGAGAACCTGGAAGGCAGGATGTGTACGAAGCACGATAAAcctctggagctgttctgtaagaccgaccagacatgtgtctgcatgctctgcCATGTTTCAGACCACAAGATGCATGATGTTATTCCTCTGAAAGAAGGATATGAAGAAAagaaggcagagctggaggctGAAATTCAGCAGATGATCCAGAAAAGACGACTGAAGATTCAAGAGATCAAACACTCAGTCAACCTCAGTGCGGAAGATGCAGACATagagatagcagaaggtgttcaAGTCTTCACTTTTCTAATGGAGTCTGTTGAGAGAGGCCTGAATGAGCTCATCAACAcgatcaaagagaagcagaaaacaacagaaaaacaggcccaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagctctcacgctctgaagaccaCCTCTATCTTCTGCAGAGTGTCCAGTCCATGAAAGCTATTCCACCCACCAGGGACTGGACAGAGGTCAGCATCCATCCATCAACCTATGAGGGGACTGTGGTGAGAGCTGTGGCTCAGCTGGAGGAAACACTCAGTGAAAACAGGAAAAAGCTACTTGAGtctgagctgaagagggtccAGCAGTATGCAGTGAATGTGAGTCTTGATCCTGAAACAGCACATCCTAatctcatcctgtctgatgatGGGAAACAAGTAAATCATGGTGATGTAAAGAAAAATCTCCCTGACAAACCAGAGAGATTTTCTAattgtctttgtgtttttggAAAGCAGAGTTTCTCAGAGCAGAGTTCCTCTTCAGGCAGATTTTACTTCGAGGTTGAAGTTAAAGAAAAGACTAAGTGGACTTTAGGAGTAGCCAGAGAGTCAATCAACAGGAAAGAGAACATCCCACTGAGCCCTGAGGATGGTTACTGGACTATAGGATTGAGAAATGAAAATGAGTACCAAGCTAATGCTAACCCTcctgtccttctctctctgaagtctcctcctcagaaggtgggggtgtttgtggattgTCTGGAGGGTCTCGTCTCCTTTTATGACGTagatgctgcagctcttatctactcctttactggctgctccttcactgagaaGCTCTACCTGTACCTCGGTCCTTGTCCTAATGATGGTGGTAAAAACTCTGCccctctgatcatctctcctgtcaATCGCACGAGACCGAGTAGaacaattatttgattttgtatGAAAGCAATTACCTTTAAATAAGAGTACATATTATTTGGTAACGGTCACTGTATTTTGGCTTTTTTCTGATTTATCTGGTTTTGGCTTTTTGGTATTATATCATATTTCAACGCATATAATCGGGTTCGTAAGATATCGTATGGAAACTTATGCACGCCCATCAATATGATCTCCTACGAATTTAGGTGTCCACCAGCTGGTCGTGTGACAACCTGGTTAAGTTTAGCGGCCTTTACAGTTCAATTTAGCCAACAAAAGGTTACTAGGAGTGGGCTTCAGAGCACCGTGAGCTGTCAGTCGTTTTAGAGGCTGCTGCTAGTTGAGTTTAGCAGACaaaaggtgactttgagccgggtacatggcatggaattacagtgctttagtAGTAATAGtcattacttttcgtagctatatgatatggctgcacaattaatcaaattccCACTATTAAATGAACATTATCACCTGCAATACTGATACTTAAAATGCATGCTCCGCTCATAATAAACTCTGCTGCATATCGAATTAAGCGCTTCGTAGACTGACAGCCAGCGACCAGGGGGCATTTGAGATGTTTTTGCTTCATTTTTGGTGAGCTGTCTGTGAAAAACTTTCCTGACTTCCTGACTGCTGCAGTCCAGAGTAGAACCGTAGCCTTGTTTTAACTATATTTTAAGTCACAACATGAAAGTGGAAGCAGTGCTCTGTTGATTTAAGTTTTTAAGTTTTAgtcaaattttatttatatgttgCTTCTAGGAGATCCACTGTAAATAAGGACCAGTCTTAATTTGATCCAAAATATTTGTACATTAGCAGGATTGTAGCTCAACATGGATGGAAAGCAGTgctctgtttatttaaatgtgaaagtgcaattaaaatattttgtccctaaaatcaatgaataatcataatctcaatattgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824067.1 False 2618 mRNA 0.43 2 6494574 6504506
XM_039824155.1 True 2682 mRNA 0.43 3 6494570 6507444

Neighbor

gene id symbol gene type direction distance location
LOC120574175 NA coding downstream 2771 6488020 ~ 6491799 (-)
LOC120574130 NA coding downstream 12200 6476965 ~ 6482370 (-)
LOC120573968 LOC103383287,LOC103375385,LOC108228344,LOC101483597,LOC101070538,LOC106535156,LOC105919311 coding downstream 18677 6467139 ~ 6475893 (-)
LOC120568678 NA coding downstream 208146 6269260 ~ 6286424 (-)
LOC120563932 NA coding downstream 278089 6213667 ~ 6216481 (-)
LOC120569774 NA coding upstream 257096 6764540 ~ 6764654 (-)
LOC120569514 NA coding upstream 258402 6765846 ~ 6765960 (-)
LOC120569560 NA coding upstream 259782 6767226 ~ 6767341 (-)
LOC120569553 NA coding upstream 260739 6768183 ~ 6768294 (-)
LOC120569564 NA coding upstream 261727 6769171 ~ 6769280 (-)
G2185 NA non-coding downstream 100939 6393053 ~ 6393631 (-)
G2184 NA non-coding downstream 112602 6323709 ~ 6381968 (-)
G2196 NA non-coding downstream 121633 6372317 ~ 6372937 (-)
G2194 NA non-coding downstream 127554 6357087 ~ 6367016 (-)
G2180 NA non-coding downstream 177837 6276954 ~ 6316733 (-)
G2222 NA non-coding upstream 21222 6528666 ~ 6548809 (-)
G2226 NA non-coding upstream 46123 6553567 ~ 6553922 (-)
G2228 NA non-coding upstream 55672 6563116 ~ 6563553 (-)
G2234 NA non-coding upstream 81380 6588824 ~ 6589079 (-)
G2248 NA non-coding upstream 123901 6631345 ~ 6632025 (-)
G2177 NA other downstream 227332 6266606 ~ 6267238 (-)
LOC120563747 LOC104946033 other downstream 287680 6200947 ~ 6206890 (-)
G2146 NA other downstream 382978 6111139 ~ 6111592 (-)
LOC120563692 NA other downstream 757584 5731439 ~ 5736986 (-)
LOC120563672 esf1,LOC108229506 other downstream 994577 5476545 ~ 5499993 (-)
G2219 NA other upstream 14062 6521506 ~ 6534443 (-)
spred2a spred2 other upstream 33198 6540642 ~ 6581598 (-)
vps54 vps54 other upstream 301308 6808752 ~ 6876237 (-)
LOC120565104 peli1,LOC103372217,LOC100709940,LOC102294912,LOC101486541,LOC108247092,LOC107382286 other upstream 381844 6889288 ~ 6938987 (-)
LOC120571633 otx1,LOC102233826 other upstream 491727 6999171 ~ 7017659 (-)

Expression


Co-expression Network