G69932


Basic Information

Item Value
gene id G69932
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 1956191 ~ 1964307 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU93670
CTCCTTTCTCCCAGATGACAGACATCCTGTCCTCCACTCCGTTCACCCCATTTGGGATCTTGCTGAAGTCGTCTTTGCCCAGAGCCTTCTGGCACACAGAAAAGGTGCAGTTGTCCGTCCCCGTCACACTGAGATCATCACTAGCACATTTTATGGATAAATACATGTATGGATGAATTGCAGAATAGATGCtggaaagaataaataaaaatgcaaaacaacaaCTTACAGCCACATTTATTTAATCATCTAAGCTAAGTTAAAATGCTAATTATTAGGGCTGCCCATGTTAGTCAATGAGTCCAGCAGTTCAAGGAGCCCTAAACTGCCACAAATTAGACCATGGACCCCTATTGATAAGACTTTGTCCCAGGGTCCTCCATCTGATAGGATTTTGCTCTTAATCGACTAAGATTCTTTAGTCgatgagtcatttttttatgatatTTCATGTAAACCCAGCtcgatctgctggtgatttgatttctccctgcagctcaggctggaaacctgtacgttttcTATcttgcttccgttacaaatctgcggggcCCAATCACAAGCTGGTTTATCCACCTGGTGTGCTATTGGcaggtttaacacgatgacgatagagaagcaagcagctttttgtttacattcaacatggcggccaccgaagcacagcaacccgttgatgtcgctgctgttttaaaatatttcaaaggcaagttttctctgaaaacagaacagaaacttGCCCTGGAACAATTCCTACAAAAGAAGGATGTGTTTGCCTTACTACCGACCGGCTTTGGTAAAAGCCTAATTTACCAGCTAGCCCCGCTGGTGACCAAAAGAATGGAGCTCAGTTATGTCACCTAGAtcattgatctgattggttgaaggactatccaattgcgtacagagtcatttgaactatgtcCGTTGAtcccgcctcttgtgcagtagaaaatacagagcagactccccagactaatgttcaatcttaaaagcttgagcttggtctggtgatagccagactagctgaatgacttatttccaagaaactcatTAGCACATCTTTGGTAAACACAAGAtataaagtggtgcttttgcatgattatTTGTGCAGAAATTTAGTTTTACAgatggtaaatggactgcaatTATattgcgcttttctagtctAAATGACCACGCAAAGCGCACAGATCTGTTGATTAaaccaactaatcgattagtcgacaaaactataggagtgttagtcgactaagaatttctttagtcaagGACAGCCCTACAAATTAGCGTAATTTGCGTTAATATTAGCGAGTAATAAACTGCCATGTCAGCTTTAGCCTCTTTTTCCCTGTCATCCTTCTATATTCTTACAAAAACCAATTGCTCTGAAATAAAAATGCTAAAAATTACAAAGCACACTTATGTGTGATGACATTGTTGGCTGCTAAACTTTCAGTTGCACCCACTTGGCCAGTAGGTCCATGAGGTAGCCAGGGGTGCTGGGGTCAGGTCTGAGGGGAGGACCCATGACAAAGCCCGCAGCGTGGGCCCAGTCTTTGTGCCAGCAGTGAGTACCGTCAGTGCCCAATCCAGCTGCAATGGGCTCCCCGAACACCACCCAccctacagagagagaaaaactagACATTTCCCGTTATACTGTTTCAGAGCTGGAGCAAATTTCACCTGCTGAAGAAGACCAGGGGTACGTCCCAGATTTTTTAATTGCACCCCCCCAgttccttcacttgcttcccttccaTTGTGTCTTAGTCTGGCATGGGAGAGACTCAAGGAAATCatgcaaagagagagaaaacaaggaaatgtgttgttagagGGATGAGACATTGTTTCCTATGAAGCGTCACGTGAATACTTTAGCCATATGGGCGGAGTTAAcaacggctttcagctgcacggcttctcGGAAGGATGAATGATGATGCTGCTGTGtttcctcgctcatagctccttgGAGATCCCTCCTCAATCCTTGCTCCTCGGGGCAGggataagagctttgagacggccttcactgaggagggacagaacaacttctggTTCAAGCGAGGACcactggtggaatgtaactaagtagcctacatttactcaagtactgtacttaagtactaatttgaggtacttgtactttacttgagtcttttcttttcatgccactttctacttctactccgctatgtttctgagagaaatattgtacattttagtCCACTCATCTGACAggtttagttactttacaaatgtaGATTTTTGGATACAAAACACATATGATGtttgttataaattaaactacccaacaatataacggcctacaagtccagctgaaatgattagaccattaaacacttaaaaccacttaaaaaaaaaagattattttggtacgtgtggacgtggcctaaattagttgattgacagaactgtttggatctcAGTTTCTAATAAGTGAGAttatttctgcattgagtacttttacttataatagtttatttacattttcctgatgatactttcatacttttacttaataacattttcaatgcaggacttttacagtattttttacagtgtggttaGTACTTTTAAGGATATGAATACTTTGTCCACCACTGGCAAGAAGCGAGGTGCTATCAAATAAGAGAACTgaggggtggcctctagctcacccagtaaagtgtgtgccccatgtaggctgagtccttggcagcggcccaGGGTTagaatctgacctgtggccctttgctgcatgttccTGTCCATCCACcgtcactatcaaataaagatataagccccaaaaataatcttaaaaaaaataagaggggtggtgatggcacagtggatatgacacgtgcctttggtgtgtcgattcccactgtgatacattaaccaatgtgtccctgagcaagacacttaacccctagctgctccagaggcgtgcgacctctgacatatacactcacctaaaagaTTATTAGTAACACCCTACTAATattgtgtttgaccccctttcgctttcagaactgccttaattcttcatggcattgattcaacaaggtgctggaagcattctttagaaatgttggcccatattgataggatagcatcttgcagttgatggagatttgtgggatgcacgtccagggcacgaagctcccgttccaccacaccccaaagatgttctattgggttgagatctggtgactgtgggggccattttagtacagtgaactcattgtcatgttcaagaaaccaatttgaattgattcaagctttgtgacatggtacatcatcctgctggaagtagccatcagaggatgggtacatggtggtcataaagggatggacatggtcagaaacaatgctcaggtaggctgtggcatttaaaagatgcccaattggtactaaggggcttaaagtgtgccaaaaaaacatcccccacaccattacaccaccaccaccagcgtgcccagtggtaacaaggcatgacggatccatgttctcattctgtttacgccaaattctgactctactatctgaatgtctcaacagaaatcatgactcatcagaccaggcaacatttttccagtcttcaactgtccaattgtagcctcattttcctatttttggtggggtcttctgctggtgtagcccatccacctcaaggttgtgcgtgttgtggcttcacaaatgctttgctgcagaccTCGTTaataacgagtggttatttgagtcaaagttgatcttctatcagcttggaTCActtggcccattctcctctgacctctagcatcaacaaggcattttcgccccccaggactgctgcatactggatgtttttcctttttcagaccattcattgtaaaccctagaaatggttgtgtgttaaaatcccagtaactgagcagattgtgaaatactcagaccagcccgtctggcaccaacaaccatgccacgctcaaagttgcttagatcacctttctttctcattctgacattcagtttggacttcaggagattgtcttgaccaggaccacacccctaaatgcactgaagcagctgccatatgattggttgattagataattgcattaacgagaaatcttacatgtgttcctaataatcctttaggtgagtgtatatagcAACTGTAAGTCGGatgaaagcgtcagctaaatgacatgtaatgtgatgtaatgtaagAGAACTGAGATCCATCCCAGGGGATACAGATGAATACTTCAGGAGCTGAGTGAGTTAACATTGGGTTTAGAATCTCTTTTAGAGGCTTTTCACCATAGCAACAAGAAATGTCATGTGGACACATTGAATAATTTAacgttttctgtttttttgtgaaaaagaaaagacattgAATGGTAATATCAAATTTGAACACTGATATTGGTTTCTGTCCTTTAAGAGGCTGTGCCTGGCCTTCCTCTCTCAACCTTGCCCTATTTCAACAGCAGGTGGCAGCAAGCCCACACTCACCGTCTCTGCGTGCATTAGACACCACCTTGGCGGCAGATTTGCTCATGACATGGACCACATACAGCGGGCAGTTGACAGCGTGGGCGATGGTGATGGCTCGCTGGGTGGCCTCGGCCTCCACCTCCTCGGGCCGACACAGCTCATGGCCCTCTGGCCCCGTGATGCCCAGAGACAGCATCTTCTTAGTCCCCTGTCAAGTCCCAGCGGGGACAGGGGACAATAAGGCAGTGCAAAGGTTAGAGGAGATGGTTGGATAACAGCACAATAGAGAGGGAACCTGCTATAACTAACACAACTATAAGTACACTAATATGTTAAGGAGCATGTGTAAACATGAACTAACAAGGCAAagGAGTGCTATAAAATATGGTATCACATGTGTTTGGTTGAAATTGGCTTCCAATATGtagaaaaatattaaattggtCCCTTCACTTTGTCACACACTTGGTGAAAGTGACAAAATACTGAAATGACAACAACTAGGggaatattttatgttttatatgttataTGTGCTATGGATgaacaaatatatattaattttgTTTTAGAAAAAGTAATTCATGGAcaaagaaatgtacagcatGAGTACATAGTGGCATTACTAATGTTAGACCAATATGGAACGAACTGTTGTCCAAAACTGAACAAAACCCCTTGTGCTACATAACAATTACTGTCAGCACCAATTACAGATGTATTTAACCATGTTATACATCTGGAGAACCCAAACAGAAGTAATGCTGTAATAACTCTTTAAATCATTTAGTTTGTGGTAAAGATCCATTCTGGCAATTTACCTTTGTACTGATGTTATTTACTCCACAGCACAATGTGTGGTCTAATTGTACGTGTCCATATGGGCGTTGTTTTCACGGATGGGATCACCCCGCTTCCCAGCATCGCACGCTAGTGGGCTTGccaccagtttctcttcactgacaagcaaagaaaacagtctccgccctcctacaactgcaatggctgcagctgattggacaaacacaTCACGTGGGGCAGGCTACTCTCGAATTTCAAAACTGACCATAACGGCAGATCGTTCGGAGTACAATcccgtattttacaaaaatagttcagcaaaaagcattttaagcaagaaataggccatgccgttgttgaatctgtcttcatttcaaaggtaagtttaaaagatttcgtcagcttttgagaggcggcgagccgaGCCGGCCGCTCCTCACTCGACGCCTAGAAATGAATGGGAGGCAGGGAAATGacgctgacaatggacacacacCTTCAGtttagaataaataataaaaggtagtcaaaataatataaaataagtaCACCTGAAAAATCTGAAATATGTCATTAGTTCAAAATCATGTCTAAAAGCAATTCTCATGAAACTTGGAAAGGTTTTGTTGAGTTGTCAAATGGGAGCCCAAAGGAACACAAAGAGAACATTTGGGTTAACGACTTAGTATACCTTTAACACATCTCCCAGTGACAGCATTAATCATGCATTCCCCACCACAACAGACCCacgtttcacttttttttaggcATTTGCTGCATCCTAGTGGTGAATTGTTGTCATGACATTTGAACTAAAAAACTATTCTTGGGA

Function

GO:

id name namespace
GO:0043254 regulation of protein-containing complex assembly biological_process
GO:0044087 regulation of cellular component biogenesis biological_process
GO:0008154 actin polymerization or depolymerization biological_process
GO:1902903 regulation of supramolecular fiber organization biological_process
GO:0090066 regulation of anatomical structure size biological_process
GO:0051493 regulation of cytoskeleton organization biological_process
GO:0032956 regulation of actin cytoskeleton organization biological_process
GO:0007015 actin filament organization biological_process
GO:0032970 regulation of actin filament-based process biological_process
GO:0051258 protein polymerization biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030832 regulation of actin filament length biological_process
GO:0030833 regulation of actin filament polymerization biological_process
GO:0030029 actin filament-based process biological_process
GO:0033043 regulation of organelle organization biological_process
GO:0034622 cellular protein-containing complex assembly biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0030041 actin filament polymerization biological_process
GO:0110053 regulation of actin filament organization biological_process
GO:0008064 regulation of actin polymerization or depolymerization biological_process
GO:0032535 regulation of cellular component size biological_process
GO:0032271 regulation of protein polymerization biological_process

KEGG:

id description
ko04520 Adherens junction
ko05130 Pathogenic Escherichia coli infection
ko05131 Shigellosis
ko05100 Bacterial invasion of epithelial cells

RNA

RNA id representative length rna type GC content exon number start site end site
TU93670 True 6130 lncRNA 0.42 2 1956191 1964307

Neighbor

gene id symbol gene type direction distance location
oxr1a oxr1 coding downstream 305552 1376272 ~ 1650639 (-)
si:dkey-29h14.10 NA coding downstream 641055 1308856 ~ 1315136 (-)
LOC120561787 azin1 coding downstream 783646 1160199 ~ 1172545 (-)
ubr5 ubr5 coding downstream 811276 1088737 ~ 1144915 (-)
LOC120562566 mtdh,LOC103364934,LOC102233891 coding downstream 879477 1062558 ~ 1076714 (-)
LOC120561841 NA coding upstream 12964 1977271 ~ 1979210 (-)
rims2a rims2,LOC106523613 coding upstream 18097 1982404 ~ 2171236 (-)
dcaf13 dcaf13 coding upstream 209797 2174104 ~ 2192793 (-)
LOC120562915 cthrc1 coding upstream 237231 2201538 ~ 2207789 (-)
LOC120562568 fzd6 coding upstream 245549 2209856 ~ 2226422 (-)
G69927 NA non-coding downstream 9034 1946945 ~ 1947157 (-)
G69893 NA non-coding downstream 279840 1676118 ~ 1676351 (-)
G69866 NA non-coding downstream 601166 1354298 ~ 1355025 (-)
G69817 NA non-coding downstream 670312 1285584 ~ 1285879 (-)
G69799 NA non-coding downstream 782776 1173162 ~ 1173415 (-)
G69995 NA non-coding upstream 164164 2128471 ~ 2128741 (-)
G70090 NA non-coding upstream 643935 2608242 ~ 2608898 (-)
G70081 NA non-coding upstream 646045 2610352 ~ 2611804 (-)
G70092 NA non-coding upstream 673755 2638062 ~ 2638288 (-)
G70094 NA non-coding upstream 679566 2643873 ~ 2644416 (-)
zfpm2a zfpm2 other downstream 95025 1725158 ~ 1861166 (-)
osr2 osr2 other downstream 1223435 728485 ~ 732756 (-)
usp45 usp45 other upstream 762861 2727168 ~ 2818027 (-)
G70407 NA other upstream 1664826 3629133 ~ 3629818 (-)
LOC120563202 NA other upstream 2015004 3979311 ~ 3979414 (-)
eny2 eny2,LOC100692744 other upstream 2108017 4072324 ~ 4077811 (-)
cep76 cep76 other upstream 2397688 4361995 ~ 4445053 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G15563 NA non-coding CI01000001 null 4252984 ~ 4255024 (-)