LOC120561601 (kcns2,LOC102789903)


Basic Information

Item Value
gene id LOC120561601
gene name kcns2,LOC102789903
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 873040 ~ 876038 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804744.1
cagagagagagagagagaggaattcCCTAGCACAACCAAAAGCGGCTGCCAGGGTGTGCTTATCAGTTCCTATGGCTCCCAGAATTCACTGTTATAAATGTGGCCGATACCTGCCGCCGAAGGAGATGTAAAACCATGCGGATGCAGGATGTAAGGACTACCAGCTACAACAAGCCTTCGGGTATATTTGAGGAGGGACCAATTTATTTCTGTCTGGAGGCAACATCATATTTGCGCCGACTCCCTTTGGAAGAGACTTCCTAATCTTCTGCCCAAGCTGAGAAAATCAACCTGACAGAGACGCTCCTGTCTGTTCTCCAGGGGACAAGCGTGTCTGCGTTTATTATAGGGCCACAACTTGGCCACAAACTGCAATATCCGGAGTTGAAATGCTAAGTATTTCGTAGTGGGGTTCAGTGAACTGGCAGCGCTTTAAAACATGACAGGTCAGGCCCTGGGGAAACCAGGCAGCGGGGCTCACATGGATGACAACGCCGCCATCCACATCAACGTGGGCGGCTTCAAGAAGCGTCTCCAGTCGGATACGCTCTCCCGGTTCCCTGAGACCAGGCTTGCGCGTTTACTCCACTGTCAGTCCAAAGAGTCCATACTGGAGCTGTGCGACGACTACGACGACACCGAGAAAGAGTTTTACTTCGACAGGAACCCAGCACTCTTCCCCTACGTGTTGAATTTCTACAACACGGGCAGGCTGCACGTCATGGCCGAGCTGTGCATCTTCTCCTTCAGCCAGGAGATCGAGTACTGGGGCATCAACGAGTTCTTTATTGACTCGTGCTGCAGCAGCGCCTACCACTGTAGGAAAATGGACCAGGACCGGGAGGACTGGGAGGACAGGAGCGATGAAGGGAGCACTACTTCATCTTTCGACGAACTGTTGGAGTTTTACAGCGACGCCACCAAGTttgacaagcagctgcttgggAGCGCGCGGAGGCGCGTCTGGTTAATGCTGGATAACCCCGGCTACTCCGTGGCCAGCCGGATCATCAGCATCCTCTCTATCCTGGTGGTGCTCGGCTCCATCGCCACGATGTGCATGAACAGCATGAGCGAGTTCAGCCTGTTGGACAGTGAGGGGCAACCCACAGAGGACCCCCGTTTCGAGACTGTCGAGCACTTTGGCATCGGCTGGTTCACTCTGGAGCTGCTCGCCAGGTTCACGGTGGCGCCGGATCTTCTGCATTTCTTCGAACACCCGTTAAATATAATCGACCTGGTGTCCATACTCCCGTTTTACCTGACACTGCTCATAAACCTGGTGGCGGAGAGCAGCCCGACGCTGGCCAACCTGGGACGTGTTGCACAGGTGCTGAGGCTGATGAGGATTTTCCGCATCCTGAAGCTGGCCCGTCACTCCACGGGGCTGCGCTCCCTGGGGGCCACCCTCAGGAACAGCTACAAAGAAGTGGGCCTGCTGCTCCTCTACTTGGCCGTCGGTGTGTCGTTTTTCTCCGTCATGGCCTACACGGTGGAGAAAGAGGACAGCGAGGACCTCTCCACCATTCCGTCGTGCTGGTGGTGGGCCACCGTCAGCATGACCACCGTCGGGTACGGAGATGTGGTGCCGGTGTCAATAGCTGGCAAGCTGACAGCCTCGGCGTGCATCCTGGCCGGGATCTTAGTAGTTGTGCTTCCGATTACGCTCATTTTCAATAAGTTCTCTCTCTTCTACAAGAGACAAAAACAGCTGGAGGTCGCAATGAGAAGCTGTGATTTCGACGAGGGGATAAAAGAGGTTCCCTCGGTCAACCTGAGGAACTATTACGCACACAAAGTCAAATCCCTCATGGCGAGCTTGTCAAACATGAGCCGGAGTTCACCCAGTGAACACAGTCTGAATGAATCAATACACTGAAACTGTTGTATCAAGGACACGCAGTCAGGTTGGGTGACACTTCCATTGATGTGGCTGCATGAGGAGCTGTCCAGGGTGCTGAAACCTCTGTCTCAGAAGCCCACTTCCTTCCACTGATGTCTGACCGTTTGCCTCTCTGTAGCTCAGTGCAATAATGTGTTAATCTGCGTGTCAGTCACAATGAGAAAGTAAACAAATGTACAGGACGGCCTGAATATCATAGTTTGCTGTGCATTATTATGGCCCCTCACCAAACAGGCCAAAAAGTGACCGCGTACAATTCAAAAGATGTAGTTGTTTGCAGTCGTAGATGGTGTCACACTGTAGTCCATCCTCCAGCTATACTTGTTGTGATCAAATATGTCTGAAAGTAACTCCATCTGTACCTCTTTGGAAGGAGTGTTGATGTGTAATTGTTATGTTGCAACAAGATTACTTCAGATGTGTAGTTAAAGCAAAGtattaaacaaaaaatacataacaCACTTCCTCATGTTTTTCATGTGCAGAGCGAGGGTCCTTGGCGTCTTCCTAAGTGTGTTTTACTGACAGAGATAACACATGTAAGCCCGAAGGGGGGAAGACGGATTCACAGTAGTGACTGACACAATATCTGAAACAGTGTGACGGGCATCGCAACAACCATTCAGAGCTGACATGTTGAATAAATCTATTGCATTTGTTTGTCA

Function

symbol description
kcns2 Predicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transmembrane transport and regulation of delayed rectifier potassium channel activity. Predicted to be located in perinuclear region of cytoplasm and plasma membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be integral component of membrane.

NR:

description
PREDICTED: potassium voltage-gated channel subfamily S member 2

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0051260 protein homooligomerization biological_process
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04932 KCNS2, KV9.2; potassium voltage-gated channel delayed-rectifier subfamily S member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804744.1 True 2568 mRNA 0.51 2 873040 876038

Neighbor

gene id symbol gene type direction distance location
LOC120562122 vps13b coding downstream 148474 344538 ~ 724566 (-)
spag1b spag1,LOC102791438 coding downstream 551158 295507 ~ 321882 (-)
LOC120561943 LOC103364756 coding downstream 694742 157257 ~ 178298 (-)
trnai-aau_14 NA coding downstream 844357 28610 ~ 28683 (-)
trnar-ucg_8 NA coding downstream 844714 28254 ~ 28326 (-)
pop1 pop1 coding upstream 52403 928441 ~ 956261 (-)
LOC120562727 LOC103364896 coding upstream 89251 965289 ~ 976229 (-)
LOC120561543 matn2,LOC102780797 coding upstream 100473 976511 ~ 996230 (-)
LOC120562853 laptm4b,LOC103136995,LOC103478192 coding upstream 121564 997602 ~ 1014511 (-)
LOC120561566 LOC108250351 coding upstream 158749 1034787 ~ 1046899 (-)
G69650 NA non-coding downstream 67738 805050 ~ 805302 (-)
G69615 NA non-coding downstream 530002 342587 ~ 343038 (-)
G69564 NA non-coding downstream 626100 246688 ~ 246940 (-)
G69541 NA non-coding downstream 639542 217828 ~ 233498 (-)
G69539 NA non-coding downstream 717748 155074 ~ 155292 (-)
G69698 NA non-coding upstream 87458 963496 ~ 963736 (-)
LOC120562682 NA non-coding upstream 177292 1053330 ~ 1055361 (-)
G69742 NA non-coding upstream 204341 1080379 ~ 1080878 (-)
G69746 NA non-coding upstream 206600 1082638 ~ 1083151 (-)
G69794 NA non-coding upstream 209464 1085502 ~ 1155503 (-)
osr2 osr2 other downstream 140284 728485 ~ 732756 (-)
zfpm2a zfpm2 other upstream 849120 1725158 ~ 1861166 (-)
usp45 usp45 other upstream 1851130 2727168 ~ 2818027 (-)
G70407 NA other upstream 2753095 3629133 ~ 3629818 (-)
LOC120563202 NA other upstream 3103273 3979311 ~ 3979414 (-)
eny2 eny2,LOC100692744 other upstream 3196286 4072324 ~ 4077811 (-)

Expression


Co-expression Network