LOC120562727 (LOC103364896)


Basic Information

Item Value
gene id LOC120562727
gene name LOC103364896
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 965289 ~ 976229 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806589.1
TTCCCTTCCTGCACGAATAGTGTGACAAAGCAGAGGCAGCCGGGGAACGCATTCAGCAGTAGCGCCTGCACTGCTAAGCTGCATTCTCGCAACAGATCTGGGGCAAGAGGGCAGCAGGCCATGCATAAACACAACTAGGGGAGATAATGGTGCCCAGCTACTCTTAGGAACTGAAGAGCTATAGTTGTCCATGTTTCACTGCTAGACAGTCTCTGGTTTTGCTAACAGAGGGCAGAGGAACTTGTGTTTTCTTAATATAATAGGCTCCAAGTTTTTTATTCATcaactcatttttttttttcaaacatgggGTGCTCCTCGTCCAGTGCACAGACTGTTGATCAAGAGAAAAGACCAGGTACAAAGCCAGAGGAAAGCAATGGAGATACAGTGGCACTCAGAAACGGTATCATCCCAGAAGATGCACAAACCATTGAGGACCAGATGCAGTTGCCTGTGCAGACTGCCTTACCAGACGATCTTCAACCGGGAGCCGATGATGAGGCGGAGGCCGTGTTGGTAGCCCTGGAGGCCCAGGAGGATCTTGGCTCTGGGGAGGACCTCCTGACTGCTCCTGAGCCTCTGCCAGAATCTGCTGCCCCTGCAGAGCCAGCCCCAGAGGCCGCTGCTCCAGCGGAGGCTGCTGCTCCAGCGGAAGCCGCTACGAAACTTGAGGCTGCTGTAGCTTTGGTGGAGGCACTTCCCCCTGTGGAAGAAGCTGCCGCTGTAGAAACTGTAGTGGTTGAGGCCGCTCCGGAGGTCCAAGCCCTTGTTGAGGCTACAGTGGAGGCCCCTTCTGATGAATCTGTTGTAGCTGTGCAGGCAGAGACCCCTGCTGTTGTTGAGGAGGTGGCCGCTGAGGCAGTAGAGGCCTCTCCTGAAGTTGCCACCCCTGCGGTTGAATCTGTTGTATCAGAGCCAGCAGAGGCCTCTCCTGAAGTTGCCACCCCTGCAGTTGAATCTGTTGTATCAGAGCCAGCAGAGGCCTCTCCTGAAGTTGCCACCCCTGCGGTTGAATCTGTTGTATCAGAGCCAGCAGAGGCCTCTCCTGAAGTTGCCACGCCTGCTCTTGAACCTGTTGTATCAGAGCCAGCAGTGGTCCCAGTGATTGTGGAAGAGGCAGCAGCTGTAGCGGCTGAGGGCCCTGCTGAAGTGGCTGCTCCTGTGGAGGCAGAGGCTCCAACTGACAATGCTGCACCAGCTCCTGCCTCAACAGCACAATGTGAATCCTCAGAACCAGGTGAAGTTTCAGCACCAGCACTAAGTGAGGCCTCAGCACCAGCTGAAGCGGTAGCCCCAAGTGAAGTTTTAGTATCAGACGAGGCTTCTGCACCAGGTGAAGCTGCAGCCCCAGGTGAAGCTGCAGCCCCAGCTGAAGCTGCAGCCCCAGGGGAAGCTGCAGCCCCAGGGGAAGCTGCAGCCTCAGTGGAAGCTGCAGCCCCAGGTGAAGCTGCAGCCCCAGCTGAAGCTGCAGCCCCAGCAGAAGCTGCAGCCCCAGGGGAAGCTGCAGTCCCAGTGGAAGCTGCAGCCCCAGCGGAAGCTGCAGCCCAAGCTGAAGCTGTAGCCCCAGGTGAAGCTGCAGCCCCAGTTGAAGCTGTAGCCCCAGGTGAAGCTGCAGCCCCAGGTGAAGTTTCAGCACCAGATGAGGCTTCAGCACCAGGTGTCTCAGCACCGGCTGAATCGTCAGCACTCATAGAGGCAGCACAGCTTCTTATAGATCCAAAGATTGCGGCAGCAACTATTCCAGAGTTGCCTCCATTATCTCCAGTCACTGTTGAGGCCCAAACTGAGCCTCAGAAGGCCGTTGAGGAGGCAACAGCACCTCCAGCAGCAACAACTGTGAGCTCAGAGTCTGCGGCAGCACCAGTGGAGACTCCTGTGGTTAAATCCACCCCAGCTGAAGCACCCTCGGCACCAGCCCCTGAGCCCTCACCTGAAGTGGTGTCTGCAACTGAGGCCTCTCAGGATACAGACAGCGTGAAAGCCAAAAAGGAAGATTGAGTCGACTGAAGAGATGCACCAAAATAACTAAACCCCCAAAGCTACCATTGCACGGAAACTGgaagaaaaacaagacaaagCAATAAACGCTACATTTTCAGTATTGTCATCAGCACTTACCAAACTGTACACCAGATATGTTAATATGCATGGTGCCTTGATAACATGTCCTTTAGGACATTTTTCctacatttgtaaatataaaccttttattatgtttttctaTTGAGACCTTAAGTGCCTGGAGCCACATACAGTACTCCACACGCAGGCCTATGCAGAAAAAAAGCCTATAAAAACACTTAGATGAGACAAGAGGGTGCAATACTCTGTGAAATCTGTGAACTCTTGTGAGAGTGTGATTACTTCTGCTTCTGAGGAATACAAGCCAAACGCAACTGTGAATAAAATTATGCAAAGAGTTTAAGGTGACACAAACACCAAACCGGGTGGATGAACACACCAACTAGGTTTACACTGCCAGCCTAATTTTGTATCCCCTATATTGAACTGATTTTAAAGTATGACATTTTCACAGATTGAATTTTTAGGTTTTATTAAGTCTAATTTCTGCcataaatccacatttctaATTGgtgttttaacattatttaattaAAGCCTTTCTAATAAGGTTCATTTAATTAATAGGAATGACAATACTAAATGTTATGTAACAGTGTGGACAGTGTAATACTGATAAACACTACTGTAAGTCAAAtctgtgtttcttttctgttttaagTAAGAAAGGAAACATGCATGCAGATGATCAGATGCATATACAAAAGATTAGTAATGACATAATCATTGCCAGGTTGAGGATGCAGATGATAACCCAAGTTCTGATATGTCGTCTTGCTGTTCCATGAAGCCATTTTGTGAAGCAGCACCGCAGCTGGCAGATGTTCATTTAATTATCTTTCTGAAAATGAAGGCGTTTCCAACTATAAATTCAACAACGCATTCTCACGAACGTggtcgtatgatatcgtacaaaaACTTGTTCACACCcattcgtatgatatcctacgagaTTAGGTGACCGCTGCTTGGTCACGTGACAACCGGTCACATGGCAGTTAAATTTAGCCAACAAAAGGTGACTTTTGAGCACTGTGACACTgtgagctgccggtcatttcaaCAGCctttacagttaagtttagcggcggtgacagttaagtttaggcaccaaaacaactagttgcATGGGACACGAGAACGCATTTCCTGGGTgcatgtcttgtgttttccccgggACGCAAACTCTGCTCCACGGCctaaaagccctgtgttttatgatttattttttatgacatccagcagcagtcaatgaGGTGCATATAGCAAAAAATACTGTGAATACATATGAATTAAAGTGCTCTACTTTTCGTAGCGATATGTACGAATGTTGGATGAAAACAGCCTAATTCAAAGGCCTCTTAAGGCCTAGCAACGCTGATGACATATGCACATTGGTTTTGGTTTGCGTGCATTACATACATGTGTCGCACATTAAGAGATCGCCTAGGacatgattttttaattattagttCTTAGTCTAAGTTCTTAGAAAATTATTTCAATTGTGTAAGATGTGATGTACGGAAGTGGAGAATGGCCGTGCtttaaattattgttttaatgcCATTATCTCAACAAGATCACAAGTTAATAATTGGATTTTGGTTTTTTCGAGATCACGGGATAATTATCCCGAGGTAACGAAATAATTAACTTGTGATCTCGAGACAACCgcgttaaaaaaataacaattgcATGCGCGACCGTGCTCGGCTTTTGTAGTGATGGATATTGTGGGAACAAATTTGTTTTGATGTCTATCTTTTTTCATCCGTTTCTTTCTCTGTAATATATTCCTTATCTGAGCTTTGTCTATGATTCTGCTAACCTAGTGTACAGAATAAAGTTTGAATCACTAAta
>XM_039806590.1
TTCCCTTCCTGCACGAATAGTGTGACAAAGCAGAGGCAGCCGGGGAACGCATTCAGCAGTAGCGCCTGCACTGCTAAGCTGCATTCTCGCAACAGATCTGGGGCAAGAGGGCAGCAGGCCATGCATAAACACAACTAGGGGAGATAATGGTGCCCAGCTACTCTTAGGAACTGAAGAGCTATAGTTGTCCATGTTTCACTGCTAGACAGTCTCTGGTTTTGCTAACAGAGGGCAGAGGAACTTGTGTTTTCTTAATATAATAGGCTCCAAGTTTTTTATTCATcaactcatttttttttttcaaacatgggGTGCTCCTCGTCCAGTGCACAGACTGTTGATCAAGAGAAAAGACCAGGTACAAAGCCAGAGGAAAGCAATGGAGATACAGTGGCACTCAGAAACGGTATCATCCCAGAAGATGCACAAACCATTGAGGACCAGATGCAGTTGCCTGTGCAGACTGCCTTACCAGACGATCTTCAACCGGGAGCCGATGATGAGGCGGAGGCCGTGTTGGTAGCCCTGGAGGCCCAGGAGGATCTTGGCTCTGGGGAGGACCTCCTGACTGCTCCTGAGCCTCTGCCAGAATCTGCTGCCCCTGCAGAGCCAGCCCCAGAGGCCGCTGCTCCAGCGGAGGCTGCTGCTCCAGCGGAAGCCGCTACGAAACTTGAGGCTGCTGTAGCTTTGGTGGAGGCACTTCCCCCTGTGGAAGAAGCTGCCGCTGTAGAAACTGTAGTGGTTGAGGCCGCTCCGGAGGTCCAAGCCCTTGTTGAGGCTACAGTGGAGGCCCCTTCTGATGAATCTGTTGTAGCTGTGCAGGCAGAGACCCCTGCTGTTGTTGAGGAGGTGGCCGCTGAGGCAGTAGAGGCCTCTCCTGAAGTTGCCACCCCTGCGGTTGAATCTGTTGTATCAGAGCCAGCAGAGGCCTCTCCTGAAGTTGCCACGCCTGCTCTTGAACCTGTTGTATCAGAGCCAGCAGTGGTCCCAGTGATTGTGGAAGAGGCAGCAGCTGTAGCGGCTGAGGGCCCTGCTGAAGTGGCTGCTCCTGTGGAGGCAGAGGCTCCAACTGACAATGCTGCACCAGCTCCTGCCTCAACAGCACAATGTGAATCCTCAGAACCAGGTGAAGTTTCAGCACCAGCACTAAGTGAGGCCTCAGCACCAGCTGAAGCGGTAGCCCCAAGTGAAGTTTTAGTATCAGACGAGGCTTCTGCACCAGGTGAAGCTGCAGCCCCAGGTGAAGCTGCAGCCCCAGCTGAAGCTGCAGCCCCAGGGGAAGCTGCAGCCCCAGGGGAAGCTGCAGCCTCAGTGGAAGCTGCAGCCCCAGGTGAAGCTGCAGCCCCAGCTGAAGCTGCAGCCCCAGCAGAAGCTGCAGCCCCAGGGGAAGCTGCAGTCCCAGTGGAAGCTGCAGCCCCAGCGGAAGCTGCAGCCCAAGCTGAAGCTGTAGCCCCAGGTGAAGCTGCAGCCCCAGTTGAAGCTGTAGCCCCAGGTGAAGCTGCAGCCCCAGGTGAAGTTTCAGCACCAGATGAGGCTTCAGCACCAGGTGTCTCAGCACCGGCTGAATCGTCAGCACTCATAGAGGCAGCACAGCTTCTTATAGATCCAAAGATTGCGGCAGCAACTATTCCAGAGTTGCCTCCATTATCTCCAGTCACTGTTGAGGCCCAAACTGAGCCTCAGAAGGCCGTTGAGGAGGCAACAGCACCTCCAGCAGCAACAACTGTGAGCTCAGAGTCTGCGGCAGCACCAGTGGAGACTCCTGTGGTTAAATCCACCCCAGCTGAAGCACCCTCGGCACCAGCCCCTGAGCCCTCACCTGAAGTGGTGTCTGCAACTGAGGCCTCTCAGGATACAGACAGCGTGAAAGCCAAAAAGGAAGATTGAGTCGACTGAAGAGATGCACCAAAATAACTAAACCCCCAAAGCTACCATTGCACGGAAACTGgaagaaaaacaagacaaagCAATAAACGCTACATTTTCAGTATTGTCATCAGCACTTACCAAACTGTACACCAGATATGTTAATATGCATGGTGCCTTGATAACATGTCCTTTAGGACATTTTTCctacatttgtaaatataaaccttttattatgtttttctaTTGAGACCTTAAGTGCCTGGAGCCACATACAGTACTCCACACGCAGGCCTATGCAGAAAAAAAGCCTATAAAAACACTTAGATGAGACAAGAGGGTGCAATACTCTGTGAAATCTGTGAACTCTTGTGAGAGTGTGATTACTTCTGCTTCTGAGGAATACAAGCCAAACGCAACTGTGAATAAAATTATGCAAAGAGTTTAAGGTGACACAAACACCAAACCGGGTGGATGAACACACCAACTAGGTTTACACTGCCAGCCTAATTTTGTATCCCCTATATTGAACTGATTTTAAAGTATGACATTTTCACAGATTGAATTTTTAGGTTTTATTAAGTCTAATTTCTGCcataaatccacatttctaATTGgtgttttaacattatttaattaAAGCCTTTCTAATAAGGTTCATTTAATTAATAGGAATGACAATACTAAATGTTATGTAACAGTGTGGACAGTGTAATACTGATAAACACTACTGTAAGTCAAAtctgtgtttcttttctgttttaagTAAGAAAGGAAACATGCATGCAGATGATCAGATGCATATACAAAAGATTAGTAATGACATAATCATTGCCAGGTTGAGGATGCAGATGATAACCCAAGTTCTGATATGTCGTCTTGCTGTTCCATGAAGCCATTTTGTGAAGCAGCACCGCAGCTGGCAGATGTTCATTTAATTATCTTTCTGAAAATGAAGGCGTTTCCAACTATAAATTCAACAACGCATTCTCACGAACGTggtcgtatgatatcgtacaaaaACTTGTTCACACCcattcgtatgatatcctacgagaTTAGGTGACCGCTGCTTGGTCACGTGACAACCGGTCACATGGCAGTTAAATTTAGCCAACAAAAGGTGACTTTTGAGCACTGTGACACTgtgagctgccggtcatttcaaCAGCctttacagttaagtttagcggcggtgacagttaagtttaggcaccaaaacaactagttgcATGGGACACGAGAACGCATTTCCTGGGTgcatgtcttgtgttttccccgggACGCAAACTCTGCTCCACGGCctaaaagccctgtgttttatgatttattttttatgacatccagcagcagtcaatgaGGTGCATATAGCAAAAAATACTGTGAATACATATGAATTAAAGTGCTCTACTTTTCGTAGCGATATGTACGAATGTTGGATGAAAACAGCCTAATTCAAAGGCCTCTTAAGGCCTAGCAACGCTGATGACATATGCACATTGGTTTTGGTTTGCGTGCATTACATACATGTGTCGCACATTAAGAGATCGCCTAGGacatgattttttaattattagttCTTAGTCTAAGTTCTTAGAAAATTATTTCAATTGTGTAAGATGTGATGTACGGAAGTGGAGAATGGCCGTGCtttaaattattgttttaatgcCATTATCTCAACAAGATCACAAGTTAATAATTGGATTTTGGTTTTTTCGAGATCACGGGATAATTATCCCGAGGTAACGAAATAATTAACTTGTGATCTCGAGACAACCgcgttaaaaaaataacaattgcATGCGCGACCGTGCTCGGCTTTTGTAGTGATGGATATTGTGGGAACAAATTTGTTTTGATGTCTATCTTTTTTCATCCGTTTCTTTCTCTGTAATATATTCCTTATCTGAGCTTTGTCTATGATTCTGCTAACCTAGTGTACAGAATAAAGTTTGAATCACTAAta

Function

NR:

description
PREDICTED: fibrous sheath CABYR-binding protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806589.1 True 3949 mRNA 0.47 4 965289 976229
XM_039806590.1 False 3835 mRNA 0.47 5 965289 976229

Neighbor

gene id symbol gene type direction distance location
pop1 pop1 coding downstream 9028 928441 ~ 956261 (-)
LOC120561601 kcns2,LOC102789903 coding downstream 89251 873040 ~ 876038 (-)
LOC120562122 vps13b coding downstream 240723 344538 ~ 724566 (-)
spag1b spag1,LOC102791438 coding downstream 643407 295507 ~ 321882 (-)
LOC120561943 LOC103364756 coding downstream 786991 157257 ~ 178298 (-)
LOC120561543 matn2,LOC102780797 coding upstream 282 976511 ~ 996230 (-)
LOC120562853 laptm4b,LOC103136995,LOC103478192 coding upstream 21373 997602 ~ 1014511 (-)
LOC120561566 LOC108250351 coding upstream 58558 1034787 ~ 1046899 (-)
LOC120561835 NA coding upstream 75308 1051537 ~ 1053321 (-)
LOC120562566 mtdh,LOC103364934,LOC102233891 coding upstream 86329 1062558 ~ 1076714 (-)
G69698 NA non-coding downstream 1553 963496 ~ 963736 (-)
G69650 NA non-coding downstream 159987 805050 ~ 805302 (-)
G69615 NA non-coding downstream 622251 342587 ~ 343038 (-)
G69564 NA non-coding downstream 718349 246688 ~ 246940 (-)
G69541 NA non-coding downstream 731791 217828 ~ 233498 (-)
LOC120562682 NA non-coding upstream 77101 1053330 ~ 1055361 (-)
G69742 NA non-coding upstream 104150 1080379 ~ 1080878 (-)
G69746 NA non-coding upstream 106409 1082638 ~ 1083151 (-)
G69794 NA non-coding upstream 109273 1085502 ~ 1155503 (-)
G69799 NA non-coding upstream 196933 1173162 ~ 1173415 (-)
osr2 osr2 other downstream 232533 728485 ~ 732756 (-)
zfpm2a zfpm2 other upstream 748929 1725158 ~ 1861166 (-)
usp45 usp45 other upstream 1750939 2727168 ~ 2818027 (-)
G70407 NA other upstream 2652904 3629133 ~ 3629818 (-)
LOC120563202 NA other upstream 3003082 3979311 ~ 3979414 (-)
eny2 eny2,LOC100692744 other upstream 3096095 4072324 ~ 4077811 (-)

Expression


Co-expression Network