ptpn2a (ptpn2,LOC104936248)


Basic Information

Item Value
gene id ptpn2a
gene name ptpn2,LOC104936248
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 4445782 ~ 4462631 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806962.1
GTCAGCGTGCAGGCGTGCATGCAGTATTGTGCCGGAGAAGCAGACTCCCCGCAGGGATCCCCAGGGTTACACACACTGCTGTTTAGCTAGATGGCTGACAGAAAGGAGTAACTTAGTGAACGGTGCCACAAACGCTCTGTGATCATCCAGCAATTGTCTCAGGGCATTAATTACGATATAATGGAGCAAGAATTTGAAGACATTGATTCGTCTGGGAAATGGCAAAACCTTTACAATGAAATCCGTAACCAAGCCAGTGACTATCCTTACAAGGTGGCAAAACTTCCAGCGAATCGGAATTTGAACCGCTACAGAGATGTCAGCCCATATGATCACAGTCGGGTAAAACTTGAAAACTCCGAAAATGACTACATCAATGCAAGTTTAGTCATGGTGGAAGAAGCCCAAAGAGCTTACATTCTTTCTCAGGGGCCATTGAGGAATACCTGTGGTCATTTCTGGCTGATGATTTGGGAGCAGTGTTCCAAAGCTGTTATAATGCTCAACAGAATCATTGAAAAGGGATCTGAAAAGTGTGCACAGTACTGGCCCACCACAGAGGAGCTACAGATGTCTTTCACAGACACAGGGTTTGTTGTCAGATTACTTTCAGAGGAGGACCAATCCTATTACACGATCCGAGTGCTAGAACTGCAAAACACAATGACGGGGGAGTCAAGGGAGATCTACCACTTTCACTACACCACATGGCCTGACTTTGGTGTCCCAGAATCTCCAGCCTCCTTCCTCAACTTCCTCTTCAAGGTTCGGGAGTCTGGTTCGTTGGGACCGGAGCACGGGCCCGCAGTGGTGCACTGCAGTGCTGGGATTGGCCGATCAGGGACCCTCGCCTTGGTGGACACCTGTCTGGTCCTGATGGACAGGAGGAGGGACCCATCATCAGTGGACATACAAAAGGTGCTACTGGACATGAGGGAATACCGCATGGGCCTGATCCAGACCCCTGACCAGCTCCGCTTCTCCTACATGGCTGTCATCGAGGGAGCCAAGCTCATCCTAACAGACAAGTCAACAACCCAGCAGAACAAGCAGAGAGTGATGTCCAGAGCTCCATTGGAGCCAGATCTGCACCCTCCACCCCCTCCACCTAGACCTCACCTCAACGACAGCAGGCCCAACGGTCAGCCAGGACCCTGTCTGGAGCCACAGGCCGCCTCAGGAGACCACCTGCCGGCACGAGACCACCTGCCGGCAGAAGAGACAGACATCCAAGACCACAACATGACAGAAAACTCGGGGTATGTCAGAAAGCGACACCGTGAGGAGAGGATTGCCAGCACCTCACAGAAGGTCCAGCAGATGAAACAGAGACTGACCGACTCGGAGAGGAAACGAGACAACTGGCTATATTGGAGACCCATTCTGCTCAACGTCGgtgcaggggcagctgtggctGTCGGCCTGATGCTGTGCTGGATGTACTCCCAGTGAAACACTTTGGGTCACTTAAAGCTGACTCCTATTTTGCACCAGTACCTGGCATTAGGTACTTCTCTAAGTAGATGTAGATGGTAATATGTGCATAACTGAGGgtatttatttcttaaggtcAAAATGCGGGAGCGCTAGATCAAATGATTGTGTGTATATTTTTCATGTAAGATCTTAACAAAAATAGAAACATctcaggatcttggtgccagcACGATGATTtcatttcctttccttcttGTCACTGTTGATGAATGTACTGTACCATAGCAAATCGCTTGGAAAGAAAACTTACTAAAGGTGCAGtacaaagcaaaaaaataattctGACAAGTTGGGTTTTTTGCATTCTTTATTTGTAGTGGTGAGATGTGTGTTGGTCATCTGTggacacattttacattttgcatttcAAAATGATGTTTTGAAAGTGTCGACTGTCCATCCTACCATAGATATGTAGAAAGACTTCAAAGCCTAGAGGTCAGCTAtgtgagtttttgtttttctgtaatgaaatgtgcatgcatgcatttagAGGTTTTCCAGAGCACCACTTGTTCTTCCATTCACATTTAGCAGGGGCATCCCAATACGGccagatatatatttttgtgtgaCTGGACACTTTATGGGGGAGCTGCCTTGCTGATGTTTTTAACTTTGCTAgaatgttaacattttattttctattataTGAGCACCTTTTTTCATAGGTTTTGGTTGTCACATGGATTATACAAGATGACAGGTCCCTCGCCGCTTAGTGCGTGTATTTACCCACTGGATGGGttcgtgtgtgtatgttcagGTTGTTCCACTGTTGTTTTTGAGGAAACCAAAGCAAAGCTGTCCGTTTTTGGAAAGTAACAGCCAGGCAAGCTATTAAATAAAATTGTGGAATGTATTTTCCGTTGTATCTCTGACATAACTGACAACTGCATTACAAAATGATAGACATAGTAGCTTTGCATTGCGTTTGACTTTTTAATTTGATCCCATAGAATTACTAAATTGGTTTTAAAGTGACTGGGACCAATCCAAAACTATAATAGTGCAATTTAGAAGTTGGAGCAAAGCACCTTGGATTAAATTCTAGTTAGGAGAGAGTGATAGCATACACGTAAGTACCTATTTGTTTGCTGGTTGAGATAGCTTTTAATGTGCCTTGAAGTGAATTAAATGGAAAAATGTATGCTCCAAGGTTTCCTAGCATAATCAGTACAGATAAAAGTGTATGTGATCTGCTGTTTCCCACAATACATGAGTAGCATGTTAGCACTGCATTGACCGGTTTGTATCAGAGTTGTCATTAGCGTGTACTGACTCCTGAGAGGAAATGGTGGGTTGCTGATTGGCTTAGATCCCACCGTTGGATATTGCTATTACGCCGTTCTCTTTTAACCCAGAAGAGACACGTTTGATCATAACATTCCATTTATTCTTGTTTTCCACATAAAATTTCAGGAGAGTTTTGTACACTGCTGAGCTGCAGTGAGAACATGACCGATGGCATTTTGAAAAAGAAGCAAACAAAACCATGAAatacttcttaaaataaaacattcatcTTTTTTTACCAAA
>XM_039806963.1
AGTCAGCGTGCAGGCGTGCATGCAGTATTGTGCCGGAGAAGCAGACTCCCCGCAGGGATCCCCAGGGTTACACACACTGCTGTTTAGCTAGATGGCTGACAGAAAGGAGTAACTTAGTGAACGGTGCCACAAACGCTCTGTGATCATCCAGCAATTGTCTCAGGGCATTAATTACGATATAATGGAGCAAGAATTTGAAGACATTGATTCGTCTGGGAAATGGCAAAACCTTTACAATGAAATCCGTAACCAAGCCAGTGACTATCCTTACAAGGTGGCAAAACTTCCAGCGAATCGGAATTTGAACCGCTACAGAGATGTCAGCCCATATGATCACAGTCGGGTAAAACTTGAAAACTCCGAAAATGACTACATCAATGCAAGTTTAGTCATGGTGGAAGAAGCCCAAAGAGCTTACATTCTTTCTCAGGGGCCATTGAGGAATACCTGTGGTCATTTCTGGCTGATGATTTGGGAGCAGTGTTCCAAAGCTGTTATAATGCTCAACAGAATCATTGAAAAGGGATCTGAAAAGTGTGCACAGTACTGGCCCACCACAGAGGAGCTACAGATGTCTTTCACAGACACAGGGTTTGTTGTCAGATTACTTTCAGAGGAGGACCAATCCTATTACACGATCCGAGTGCTAGAACTGCAAAACACAATGACGGGGGAGTCAAGGGAGATCTACCACTTTCACTACACCACATGGCCTGACTTTGGTGTCCCAGAATCTCCAGCCTCCTTCCTCAACTTCCTCTTCAAGGTTCGGGAGTCTGGTTCGTTGGGACCGGAGCACGGGCCCGCAGTGGTGCACTGCAGTGCTGGGATTGGCCGATCAGGGACCCTCGCCTTGGTGGACACCTGTCTGGTCCTGATGGACAGGAGGAGGGACCCATCATCAGTGGACATACAAAAGGTGCTACTGGACATGAGGGAATACCGCATGGGCCTGATCCAGACCCCTGACCAGCTCCGCTTCTCCTACATGGCTGTCATCGAGGGAGCCAAGCTCATCCTAACAGACAAGTCAACAACCCAGAACAAGCAGAGAGTGATGTCCAGAGCTCCATTGGAGCCAGATCTGCACCCTCCACCCCCTCCACCTAGACCTCACCTCAACGACAGCAGGCCCAACGGTCAGCCAGGACCCTGTCTGGAGCCACAGGCCGCCTCAGGAGACCACCTGCCGGCACGAGACCACCTGCCGGCAGAAGAGACAGACATCCAAGACCACAACATGACAGAAAACTCGGGGTATGTCAGAAAGCGACACCGTGAGGAGAGGATTGCCAGCACCTCACAGAAGGTCCAGCAGATGAAACAGAGACTGACCGACTCGGAGAGGAAACGAGACAACTGGCTATATTGGAGACCCATTCTGCTCAACGTCGgtgcaggggcagctgtggctGTCGGCCTGATGCTGTGCTGGATGTACTCCCAGTGAAACACTTTGGGTCACTTAAAGCTGACTCCTATTTTGCACCAGTACCTGGCATTAGGTACTTCTCTAAGTAGATGTAGATGGTAATATGTGCATAACTGAGGgtatttatttcttaaggtcAAAATGCGGGAGCGCTAGATCAAATGATTGTGTGTATATTTTTCATGTAAGATCTTAACAAAAATAGAAACATctcaggatcttggtgccagcACGATGATTtcatttcctttccttcttGTCACTGTTGATGAATGTACTGTACCATAGCAAATCGCTTGGAAAGAAAACTTACTAAAGGTGCAGtacaaagcaaaaaaataattctGACAAGTTGGGTTTTTTGCATTCTTTATTTGTAGTGGTGAGATGTGTGTTGGTCATCTGTggacacattttacattttgcatttcAAAATGATGTTTTGAAAGTGTCGACTGTCCATCCTACCATAGATATGTAGAAAGACTTCAAAGCCTAGAGGTCAGCTAtgtgagtttttgtttttctgtaatgaaatgtgcatgcatgcatttagAGGTTTTCCAGAGCACCACTTGTTCTTCCATTCACATTTAGCAGGGGCATCCCAATACGGccagatatatatttttgtgtgaCTGGACACTTTATGGGGGAGCTGCCTTGCTGATGTTTTTAACTTTGCTAgaatgttaacattttattttctattataTGAGCACCTTTTTTCATAGGTTTTGGTTGTCACATGGATTATACAAGATGACAGGTCCCTCGCCGCTTAGTGCGTGTATTTACCCACTGGATGGGttcgtgtgtgtatgttcagGTTGTTCCACTGTTGTTTTTGAGGAAACCAAAGCAAAGCTGTCCGTTTTTGGAAAGTAACAGCCAGGCAAGCTATTAAATAAAATTGTGGAATGTATTTTCCGTTGTATCTCTGACATAACTGACAACTGCATTACAAAATGATAGACATAGTAGCTTTGCATTGCGTTTGACTTTTTAATTTGATCCCATAGAATTACTAAATTGGTTTTAAAGTGACTGGGACCAATCCAAAACTATAATAGTGCAATTTAGAAGTTGGAGCAAAGCACCTTGGATTAAATTCTAGTTAGGAGAGAGTGATAGCATACACGTAAGTACCTATTTGTTTGCTGGTTGAGATAGCTTTTAATGTGCCTTGAAGTGAATTAAATGGAAAAATGTATGCTCCAAGGTTTCCTAGCATAATCAGTACAGATAAAAGTGTATGTGATCTGCTGTTTCCCACAATACATGAGTAGCATGTTAGCACTGCATTGACCGGTTTGTATCAGAGTTGTCATTAGCGTGTACTGACTCCTGAGAGGAAATGGTGGGTTGCTGATTGGCTTAGATCCCACCGTTGGATATTGCTATTACGCCGTTCTCTTTTAACCCAGAAGAGACACGTTTGATCATAACATTCCATTTATTCTTGTTTTCCACATAAAATTTCAGGAGAGTTTTGTACACTGCTGAGCTGCAGTGAGAACATGACCGATGGCATTTTGAAAAAGAAGCAAACAAAACCATGAAatacttcttaaaataaaacattcatcTTTTTTTACCAAA

Function

symbol description
ptpn2 Enables protein tyrosine phosphatase activity; signaling receptor binding activity; and syntaxin binding activity. Involved in several processes, including negative regulation of signal transduction; peptidyl-tyrosine dephosphorylation; and regulation of hepatocyte growth factor receptor signaling pathway. Located in several cellular components, including endoplasmic reticulum; endoplasmic reticulum-Golgi intermediate compartment; and nucleoplasm. Colocalizes with plasma membrane.

NR:

description
PREDICTED: tyrosine-protein phosphatase non-receptor type 2-like isoform X1

GO:

id name namespace
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K18026 PTPN2, PTPT; tyrosine-protein phosphatase non-receptor type 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806962.1 True 3036 mRNA 0.44 9 4445782 4462630
XM_039806963.1 False 3034 mRNA 0.44 9 4445782 4462631

Neighbor

gene id symbol gene type direction distance location
id4 LOC103388899,LOC101483990 coding downstream 234338 4207531 ~ 4211444 (-)
sybu sybu coding downstream 539412 3874427 ~ 3906370 (-)
ttk LOC105419921 coding downstream 595197 3788516 ~ 3850585 (-)
bckdhb bckdhb coding downstream 664135 3690413 ~ 3781647 (-)
tpbgb NA coding downstream 1004661 3438932 ~ 3441121 (-)
LOC120562255 NA coding upstream 148754 4611385 ~ 4612551 (-)
fam210aa fam210a coding upstream 439865 4902496 ~ 4911928 (-)
LOC120561869 NA coding upstream 737870 5200501 ~ 5202258 (-)
LOC120562331 mc2r,LOC108251293,LOC107378818 coding upstream 800802 5263433 ~ 5264356 (-)
LOC120562245 NA coding upstream 1337753 5800384 ~ 5865827 (-)
G70572 NA non-coding downstream 36739 4408840 ~ 4409043 (-)
G70538 NA non-coding downstream 86964 4357980 ~ 4358818 (-)
G70530 NA non-coding downstream 147675 4297761 ~ 4298107 (-)
LOC120562918 NA non-coding downstream 159139 4286172 ~ 4286643 (-)
G70515 NA non-coding downstream 290671 4154793 ~ 4155111 (-)
G70613 NA non-coding upstream 54501 4517132 ~ 4518554 (-)
LOC120562256 NA non-coding upstream 151193 4613824 ~ 4615309 (-)
LOC120562259 NA non-coding upstream 204608 4667239 ~ 4668215 (-)
G70669 NA non-coding upstream 261486 4724117 ~ 4724379 (-)
G70671 NA non-coding upstream 272146 4734777 ~ 4734979 (-)
cep76 cep76 other downstream 729 4361995 ~ 4445053 (-)
LOC120562328 NA other downstream 10813 4426306 ~ 4434969 (-)
eny2 eny2,LOC100692744 other downstream 367971 4072324 ~ 4077811 (-)
LOC120563202 NA other downstream 466368 3979311 ~ 3979414 (-)
G70407 NA other downstream 815964 3629133 ~ 3629818 (-)
LOC120562332 NA other upstream 644181 5106812 ~ 5156330 (-)
LOC120562243 NA other upstream 1352590 5815221 ~ 5817189 (-)
G71108 NA other upstream 3034432 7497063 ~ 7500153 (-)
enpp2 enpp2 other upstream 3108732 7571363 ~ 7610514 (-)
ppox ppox other upstream 3321252 7783883 ~ 7796562 (-)

Expression


Co-expression Network