LOC120562618



Basic Information


Item Value
gene id LOC120562618
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 4774938 ~ 4826673 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005639797.1
CAAAGTCCATCTTTCTTAGTCACCCGTTTTTTACAGAAGCGGATTATCCAATTCTCCACACTTCTTCCATGATTCCACCAGAAAACCATGCTTTCAGGCAGTCATTCCCTGGAGCCAACATCACACGAGAAGAAAATTAAAGGTTGACTATTAAGCGCAAGGTGCTGAGTGCTGAAGGTGGTGGTGTCTGTGTCCCCGGTGGTGGTGTCTCCctcctgtgtgctgtgttttcccCCTTGGTTTATTTTGAGTTCTTCAccactgtgtgagtgtgtgtgtgtgcacgctcaCGTGTGATTGGGGTGATCCTTCCCTGAGACTCCACACCCCTTGACCCTGTCCCTCCACCGTGTCTCCCTGTTACAAACCCGATCCTTCCTGTAACggaaaatattgcttccaacgccccccatcatcttctgaaggccccctggggggcggtaccgcccccgttgagaaacactgctgtaATGGAACCGGGTTGAG

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005639797.1 True 486 lncRNA 0.52 3 4774938 4826673

Neighbor


gene id symbol gene type direction distance location
LOC120562255 NA coding downstream 162387 4611385 ~ 4612551 (-)
ptpn2a ptpn2,LOC104936248 coding downstream 312307 4445782 ~ 4462631 (-)
id4 LOC103388899,LOC101483990 coding downstream 563494 4207531 ~ 4211444 (-)
sybu sybu coding downstream 868568 3874427 ~ 3906370 (-)
ttk LOC105419921 coding downstream 924353 3788516 ~ 3850585 (-)
fam210aa fam210a coding upstream 75823 4902496 ~ 4911928 (-)
LOC120561869 NA coding upstream 373828 5200501 ~ 5202258 (-)
LOC120562331 mc2r,LOC108251293,LOC107378818 coding upstream 436760 5263433 ~ 5264356 (-)
LOC120562245 NA coding upstream 973711 5800384 ~ 5865827 (-)
adgrb1a adgrb1 coding upstream 1467038 6293711 ~ 6509543 (-)
G70672 NA non-coding downstream 39527 4735026 ~ 4735411 (-)
G70671 NA non-coding downstream 39959 4734777 ~ 4734979 (-)
G70669 NA non-coding downstream 50559 4724117 ~ 4724379 (-)
LOC120562259 NA non-coding downstream 106723 4667239 ~ 4668215 (-)
LOC120562256 NA non-coding downstream 159629 4613824 ~ 4615309 (-)
G70692 NA non-coding upstream 50069 4876742 ~ 4877017 (-)
G70694 NA non-coding upstream 66184 4892857 ~ 4893545 (-)
G70693 NA non-coding upstream 68266 4894939 ~ 4897498 (-)
G70695 NA non-coding upstream 70859 4897532 ~ 4897884 (-)
G70696 NA non-coding upstream 72964 4899637 ~ 4899925 (-)
cep76 cep76 other downstream 329885 4361995 ~ 4445053 (-)
LOC120562328 NA other downstream 339969 4426306 ~ 4434969 (-)
eny2 eny2,LOC100692744 other downstream 697127 4072324 ~ 4077811 (-)
LOC120563202 NA other downstream 795524 3979311 ~ 3979414 (-)
G70407 NA other downstream 1145120 3629133 ~ 3629818 (-)
LOC120562332 NA other upstream 280139 5106812 ~ 5156330 (-)
LOC120562243 NA other upstream 988548 5815221 ~ 5817189 (-)
G71108 NA other upstream 2670390 7497063 ~ 7500153 (-)
enpp2 enpp2 other upstream 2744690 7571363 ~ 7610514 (-)
ppox ppox other upstream 2957210 7783883 ~ 7796562 (-)

Expression



Co-expression Network