G90138


Basic Information

Item Value
gene id G90138
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 35770996 ~ 35771401 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU121351
cggtgaacagggtagtggtgaagataacgtcatacacccgtgttgcaagaaatgtttctgtacattgatgtcagctctaaacatatgctgtttgttctttgaacttaagagaattgtgcctgaaaagtccctgaatatgctttatgctttactataagaaagccacaataaaagttctaaccgcttgcttttaaaaaaacaacttttacttttacttttgatacttaagtacattaaatatcagaaaattacttttgatacttaagtacagtatatatcagatactttaagacttttacttaagtaatattctaaaaggtaactttcacttctaccgaagtctttttctagtacgatacttgtacttttactcaagtattgctttctagtactttatacaacactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121351 True 406 lncRNA 0.31 1 35770996 35771401

Neighbor

gene id symbol gene type direction distance location
cbln1 cbln1,LOC104949597 coding upstream 77291 35659713 ~ 35693705 (+)
si:ch211-212o1.2 LOC103358434,LOC100695703,LOC102310624 coding upstream 184455 35512384 ~ 35586541 (+)
znf423 znf423 coding upstream 263712 35338892 ~ 35507284 (+)
si:ch211-216l23.2 LOC104955245,LOC103371405,LOC106964371 coding upstream 476860 35277266 ~ 35294136 (+)
setd6 LOC102793369 coding upstream 532959 35227019 ~ 35238037 (+)
n4bp1 n4bp1,LOC101465464 coding downstream 246867 36018268 ~ 36048411 (+)
siah1 siah1,LOC102794717 coding downstream 294227 36065628 ~ 36106450 (+)
st3gal2 st3gal2,LOC102780992 coding downstream 597360 36368761 ~ 36390263 (+)
exosc6 exosc6 coding downstream 658101 36429502 ~ 36431389 (+)
tgm2l LOC103363999,LOC104953692,LOC102308322 coding downstream 673692 36445093 ~ 36458111 (+)
G90131 NA non-coding upstream 73295 35697497 ~ 35697701 (+)
G90126 NA non-coding upstream 74232 35696005 ~ 35696764 (+)
G90125 NA non-coding upstream 75511 35694907 ~ 35695485 (+)
G89969 NA non-coding upstream 603886 35166738 ~ 35167110 (+)
G89960 NA non-coding upstream 644855 35111312 ~ 35126141 (+)
G90151 NA non-coding downstream 141670 35913071 ~ 35913280 (+)
G90161 NA non-coding downstream 335642 36107043 ~ 36107491 (+)
G90162 NA non-coding downstream 336344 36107745 ~ 36108262 (+)
LOC120564233 NA non-coding downstream 414562 36185963 ~ 36188270 (+)
LOC120563515 NA non-coding downstream 468747 36240148 ~ 36240998 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other upstream 780584 34847563 ~ 34990412 (+)
G89836 NA other upstream 1335679 34434089 ~ 34435317 (+)
G89813 NA other upstream 1349815 34381836 ~ 34421181 (+)
G89811 LOC100698998 other upstream 1408619 34360484 ~ 34362377 (+)
jph3b jph3,LOC103360672 other upstream 2540886 33118201 ~ 33230110 (+)
G90142 NA other downstream 13293 35784694 ~ 35785416 (+)
anapc13 anapc13 other downstream 744610 36516011 ~ 36517921 (+)
mt2 NA other downstream 759572 36530973 ~ 36531996 (+)
wfdc1 wfdc1,LOC102778323 other downstream 2250976 38022377 ~ 38034694 (+)
G90583 NA other downstream 2283108 38054509 ~ 38055564 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G16003 NA non-coding CI01000001 null 5670934 ~ 5671226 (+)
rainbow trout (Oncorhynchus mykiss) G885379 NA non-coding NC_048574.1 CM023228.2 38000356 ~ 38000583 (+)