si:ch211-212o1.2 (LOC103358434,LOC100695703,LOC102310624)


Basic Information

Item Value
gene id si:ch211-212o1.2
gene name LOC103358434,LOC100695703,LOC102310624
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 35512384 ~ 35586541 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809629.1
ATGGCTGCGTCGCTTCTCTTCGAGACCGACATCAGGCACCGGTCCATGGCGGAGGAGGATCCGAACGGGAATGAGCACGGGGCGGCTGCACGCAGCGCGGCGCCTCGCTGGGGACCGCAGCACGCCGGGGCCCGGCAGCTCGCAAGGCTCTACTCTCCCGGGAAGCGGCTCCaggagtgggtgtgtgtgattCTCTGCTTCTTCCTTTTCATCATCaacttctccttcctcctcctgcaCTTCTCCGCCGTTCACATCTACAAGATCATCCTCGGCATCGtCCTGGGAATAGTGACGGCAGACTTTGCATCGGGGATGGTACACTGGGGGGCGGATACCTGGGGATCTGTGGACATCCCTGTTATTGGCAAGGCATTTATTCGTCCATTCAGGGAGCACCACATCGATCCAACCGCCATCACTCGCCACGACTTCATTGAAACCAATGGCGACAACTGTATGATACCCATCCTTCCACTGGCTCACATGGCCTACAAGTTCCTCACATACACACCAGAGGCCCTGACGGCGTCCTACCCCTGGGACTGCTACGTCTTCGCCCTGGCGGTTTTCGtgacgctgaccaatcagattcaCAAGTGGAGCCACTCCTACTTCGGCCTCCCGCGCTGGGTCACGCTGCTCCAGGACTGGCATCTGGTGTTGCCACGGAAACACCACCGCATCCACCATGTCTCACCGCACGAGACATACTACTGCATTACTACAGGTTGGTGTAACTATCCTCTGGACCGGCTGGGCTTTTGGAGACGAATGGAGGAATTGATCCAACAACTTACAGGGCAGAAACCACGATCTGATGACCTGGCGTGGGCCAAGAAGACCGACAGATGAACATTCAAAAACACAGacggacggatggatggatggatggatggatgggcttGCGAATGCATACATAGAAACAGGGACGGATGGGGGAaatcacacgcacgcacacacacacattttaacgatttaagtacagtatttaAGTCCACTCGAAGGGAACTATTTACAGGGACATAAATATTATAGATGCAGTTAAACACATAGACAAAACCATGGGCCATTGGCATACAGCAGGTCTTCATAAtattaagcacacacacacacacacacacacacacacacacacacacacagatttgacTCATGTCTCTGTGCTTCTTGCTTTTTTTTGCTAAAGAGCAAACATTCAAAGAAACCTTTTGGGGTTAAAAAACGTCTACCAAGCTTTGAGCGTGCGAGGTGAAAACATTAGCAGATCATAACCTAACTCTGCTGTAACAGCCAATCGGCTTGTAGTCCTGTTTAACCAATGACGTGTTGTGGTGTGTAGGTGTAGGAGGTTTCTGGAGGTTGGGCTCTCCAGGAGGGACACCGCGCTGCCTGTTGCAGGCAGCTtcttacaccacacacacatacatacacacatgcacacacaaaccagTATGAAAGTCAGATGTTCAGTCACTGTCTCTCCTGACTTCttcttgtctgtttttttctagCCCGTCCTAGAAACGTCACCGCCCTCTTTGAATTCTCATGACTGTTTCCTCACACACAAAGGTGAAAATTTGATAATTGTGTGCTTTGGATAACACATTCAGACCGGTATAACTCCCCTCTTTTGTGCCTGTGCTTGATTATCTCCACAGGCAAGACAAGACTTTTAGAGGAcaaacgtgtaaaaaaaaaaaagaaaaaaaggtttgataaaatacatactgtagcttccaTAATAACTTATAGCACTAATATAAATATGCCAGCAGTCAAGTTGCAGATGCAGACTTAACGCATGTGCAACTAAATCATGTCATCCAGTTTTGGTACGTTGTTAACAGCACTTTCTATTCACCCTACGTGTGCTTTGACAAACCGTTGGACTTTCTCTTGTTCAGACATTTCCCATAGATCTTATTGTACATAAACACGCTCGGAGTAGTCCCGCTATTTGTAGCTTTAGGAATACGAAGGCTGTGTACAAACGTTTCTAAATGAACGCACGGTATTTACTGCACACAAACTAATCCGTACAATCTCTTTGACTCCTCCGGAAGCAGTTATAAGGAGGTTTCATTAGAAGCTATGTTTTACTTGAATCCAGATGAGTTCCAAATTTTTGTCATAGTAAAGAAGCATTTAATCTCTTTGCACTTTCATGCAAATTAAAGAGGCAGCcagatgttttccttttttctcttttgtgaaTTACAATTTAAGTGAGGGAGGTGTCCACTACAAAATGAAGGCAACCGTGCGTTTCTTGGCAGGCAGAGTAAGGACACAGTTGAACTTGTAACTTGTGGTTTAGAAGAGTGTGTCATCACAATGCAGAAACAGAGAAAGTTTGGATGACAGGTTGATGTTCTTATATAAACTCAAATCTCTTTCCTCCATTTTAACATTAAGTGGCACAGACCGAAGCAGAACCTTCTTGGCGTCAACGGTTTCTCCCTTGCTGTACTTGTGCAGCGCCTGCAGACAGAAATCTATCCAGCAGAAGTTCCCGTTTCTGGGAGGATGCTTTGGGCTGCCCCAAAGGCTATAAAATGAGTCCTACATGTGTAGTTAGCATTAGCTTATCGCCACCACACTGGACGGCTCCGGGCAGGAAAGCTTACCTTGTTCTTGCTCTCCATGTTCTGCTTCTTGATTCTGCATAACTAGAATATTTTATGCAGCTTTGATTCACTTCACAACAGCCGGACCACTCCTTAAGAACGTCTGAATTATTTAAATTCTTAGGAAAGCTGGATTCTTAGGaaagaattctttttttatttaacagaacAGCATTTTGTACCACAAATTCACATTTGCAGTCTTTCATAAACATATGCAGTCATTCCGACCATTCTAGATTCGTTGCTGCGTTCGCATCCCGAATCCTCTTGTTGAAAAGAAATCTTGGAAAAATTGGTGCCGCTGTCTGCCCCACTGTGCTGCATATTTGACCGCAACTGTAAATACTAAACAACAAGAAATGTGTCACAAACCTCTAAACCTAAATCAGAGAAATTCATTAGAGAAATGCATGGCAACGTGTTTACCgcatagaaaagaaaaatactctTCAGCAAATGCTGGTTACCAAGTTGCTTAGATAATGCAAAATAATGTCTCCAGTATCActgatttctgtttgtttcataCAGTGACACACTTTAGTTGGCCGTTACTAACTCTGTACTTGAGAGTCTAGCTGCTTGACTTGTAGTTTAGGTTTAGGCTGGAAATCCCTTTGCTCACAGAAGGTCAATAATAACGGTCTGAAAATGTGTACTGCAAGCACTCATGTGTTTTCTCTGGCTTTataattttctattttcttttattaaaggATCAAGCCATGTATGGTTAAATTTTGGCGTTCCATTTTGCAGCTCAACGCGCGCTGCTCGCTGCTCGTCTTGCCTTAATGTTTTTATCTGCTCTTTGATTTAAATAAAAGATTTAAGAACTCCAAATGTT
>XM_039809630.1
CTGTTTCAAGTACTACACAGAACGTGATTGAGTTGAAGTTGATTTTGTTTCATCCTTTTATTTTGGCTCTGCTGTCACTGCTTGTATGTCGTCTGGGAAGCGGCTCCaggagtgggtgtgtgtgattCTCTGCTTCTTCCTTTTCATCATCaacttctccttcctcctcctgcaCTTCTCCGCCGTTCACATCTACAAGATCATCCTCGGCATCGtCCTGGGAATAGTGACGGCAGACTTTGCATCGGGGATGGTACACTGGGGGGCGGATACCTGGGGATCTGTGGACATCCCTGTTATTGGCAAGGCATTTATTCGTCCATTCAGGGAGCACCACATCGATCCAACCGCCATCACTCGCCACGACTTCATTGAAACCAATGGCGACAACTGTATGATACCCATCCTTCCACTGGCTCACATGGCCTACAAGTTCCTCACATACACACCAGAGGCCCTGACGGCGTCCTACCCCTGGGACTGCTACGTCTTCGCCCTGGCGGTTTTCGtgacgctgaccaatcagattcaCAAGTGGAGCCACTCCTACTTCGGCCTCCCGCGCTGGGTCACGCTGCTCCAGGACTGGCATCTGGTGTTGCCACGGAAACACCACCGCATCCACCATGTCTCACCGCACGAGACATACTACTGCATTACTACAGGTTGGTGTAACTATCCTCTGGACCGGCTGGGCTTTTGGAGACGAATGGAGGAATTGATCCAACAACTTACAGGGCAGAAACCACGATCTGATGACCTGGCGTGGGCCAAGAAGACCGACAGATGAACATTCAAAAACACAGacggacggatggatggatggatggatggatgggcttGCGAATGCATACATAGAAACAGGGACGGATGGGGGAaatcacacgcacgcacacacacacattttaacgatttaagtacagtatttaAGTCCACTCGAAGGGAACTATTTACAGGGACATAAATATTATAGATGCAGTTAAACACATAGACAAAACCATGGGCCATTGGCATACAGCAGGTCTTCATAAtattaagcacacacacacacacacacacacacacacacacacacacacagatttgacTCATGTCTCTGTGCTTCTTGCTTTTTTTTGCTAAAGAGCAAACATTCAAAGAAACCTTTTGGGGTTAAAAAACGTCTACCAAGCTTTGAGCGTGCGAGGTGAAAACATTAGCAGATCATAACCTAACTCTGCTGTAACAGCCAATCGGCTTGTAGTCCTGTTTAACCAATGACGTGTTGTGGTGTGTAGGTGTAGGAGGTTTCTGGAGGTTGGGCTCTCCAGGAGGGACACCGCGCTGCCTGTTGCAGGCAGCTtcttacaccacacacacatacatacacacatgcacacacaaaccagTATGAAAGTCAGATGTTCAGTCACTGTCTCTCCTGACTTCttcttgtctgtttttttctagCCCGTCCTAGAAACGTCACCGCCCTCTTTGAATTCTCATGACTGTTTCCTCACACACAAAGGTGAAAATTTGATAATTGTGTGCTTTGGATAACACATTCAGACCGGTATAACTCCCCTCTTTTGTGCCTGTGCTTGATTATCTCCACAGGCAAGACAAGACTTTTAGAGGAcaaacgtgtaaaaaaaaaaaagaaaaaaaggtttgataaaatacatactgtagcttccaTAATAACTTATAGCACTAATATAAATATGCCAGCAGTCAAGTTGCAGATGCAGACTTAACGCATGTGCAACTAAATCATGTCATCCAGTTTTGGTACGTTGTTAACAGCACTTTCTATTCACCCTACGTGTGCTTTGACAAACCGTTGGACTTTCTCTTGTTCAGACATTTCCCATAGATCTTATTGTACATAAACACGCTCGGAGTAGTCCCGCTATTTGTAGCTTTAGGAATACGAAGGCTGTGTACAAACGTTTCTAAATGAACGCACGGTATTTACTGCACACAAACTAATCCGTACAATCTCTTTGACTCCTCCGGAAGCAGTTATAAGGAGGTTTCATTAGAAGCTATGTTTTACTTGAATCCAGATGAGTTCCAAATTTTTGTCATAGTAAAGAAGCATTTAATCTCTTTGCACTTTCATGCAAATTAAAGAGGCAGCcagatgttttccttttttctcttttgtgaaTTACAATTTAAGTGAGGGAGGTGTCCACTACAAAATGAAGGCAACCGTGCGTTTCTTGGCAGGCAGAGTAAGGACACAGTTGAACTTGTAACTTGTGGTTTAGAAGAGTGTGTCATCACAATGCAGAAACAGAGAAAGTTTGGATGACAGGTTGATGTTCTTATATAAACTCAAATCTCTTTCCTCCATTTTAACATTAAGTGGCACAGACCGAAGCAGAACCTTCTTGGCGTCAACGGTTTCTCCCTTGCTGTACTTGTGCAGCGCCTGCAGACAGAAATCTATCCAGCAGAAGTTCCCGTTTCTGGGAGGATGCTTTGGGCTGCCCCAAAGGCTATAAAATGAGTCCTACATGTGTAGTTAGCATTAGCTTATCGCCACCACACTGGACGGCTCCGGGCAGGAAAGCTTACCTTGTTCTTGCTCTCCATGTTCTGCTTCTTGATTCTGCATAACTAGAATATTTTATGCAGCTTTGATTCACTTCACAACAGCCGGACCACTCCTTAAGAACGTCTGAATTATTTAAATTCTTAGGAAAGCTGGATTCTTAGGaaagaattctttttttatttaacagaacAGCATTTTGTACCACAAATTCACATTTGCAGTCTTTCATAAACATATGCAGTCATTCCGACCATTCTAGATTCGTTGCTGCGTTCGCATCCCGAATCCTCTTGTTGAAAAGAAATCTTGGAAAAATTGGTGCCGCTGTCTGCCCCACTGTGCTGCATATTTGACCGCAACTGTAAATACTAAACAACAAGAAATGTGTCACAAACCTCTAAACCTAAATCAGAGAAATTCATTAGAGAAATGCATGGCAACGTGTTTACCgcatagaaaagaaaaatactctTCAGCAAATGCTGGTTACCAAGTTGCTTAGATAATGCAAAATAATGTCTCCAGTATCActgatttctgtttgtttcataCAGTGACACACTTTAGTTGGCCGTTACTAACTCTGTACTTGAGAGTCTAGCTGCTTGACTTGTAGTTTAGGTTTAGGCTGGAAATCCCTTTGCTCACAGAAGGTCAATAATAACGGTCTGAAAATGTGTACTGCAAGCACTCATGTGTTTTCTCTGGCTTTataattttctattttcttttattaaaggATCAAGCCATGTATGGTTAAATTTTGGCGTTCCATTTTGCAGCTCAACGCGCGCTGCTCGCTGCTCGTCTTGCCTTAATGTTTTTATCTGCTCTTTGATTTAAATAAAAGATTTAAGAACTCCAAATGTT

Function

NR:

description
transmembrane protein 189-like

GO: NA

KEGG:

id description
K20656 TMEM189; plasmanylethanolamine desaturase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809629.1 True 3483 mRNA 0.45 6 35512384 35586541
XM_039809630.1 False 3418 mRNA 0.43 6 35546497 35586541

Neighbor

gene id symbol gene type direction distance location
znf423 znf423 coding upstream 5100 35338892 ~ 35507284 (+)
si:ch211-216l23.2 LOC104955245,LOC103371405,LOC106964371 coding upstream 218248 35277266 ~ 35294136 (+)
setd6 LOC102793369 coding upstream 274347 35227019 ~ 35238037 (+)
trnaw-cca_9 NA coding upstream 301453 35210860 ~ 35210931 (+)
LOC120564717 NA coding upstream 309362 35188845 ~ 35203022 (+)
cbln1 cbln1,LOC104949597 coding downstream 73172 35659713 ~ 35693705 (+)
n4bp1 n4bp1,LOC101465464 coding downstream 431727 36018268 ~ 36048411 (+)
siah1 siah1,LOC102794717 coding downstream 479087 36065628 ~ 36106450 (+)
st3gal2 st3gal2,LOC102780992 coding downstream 782220 36368761 ~ 36390263 (+)
exosc6 exosc6 coding downstream 842961 36429502 ~ 36431389 (+)
G89969 NA non-coding upstream 345274 35166738 ~ 35167110 (+)
G89960 NA non-coding upstream 386243 35111312 ~ 35126141 (+)
G89950 NA non-coding upstream 465729 34932900 ~ 35046655 (+)
G89942 NA non-coding upstream 697458 34814403 ~ 34814926 (+)
G89941 NA non-coding upstream 714066 34783907 ~ 34798318 (+)
G90125 NA non-coding downstream 108366 35694907 ~ 35695485 (+)
G90126 NA non-coding downstream 109464 35696005 ~ 35696764 (+)
G90131 NA non-coding downstream 110956 35697497 ~ 35697701 (+)
G90138 NA non-coding downstream 184455 35770996 ~ 35771401 (+)
G90151 NA non-coding downstream 326530 35913071 ~ 35913280 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other upstream 521972 34847563 ~ 34990412 (+)
G89836 NA other upstream 1077067 34434089 ~ 34435317 (+)
G89813 NA other upstream 1091203 34381836 ~ 34421181 (+)
G89811 LOC100698998 other upstream 1150007 34360484 ~ 34362377 (+)
jph3b jph3,LOC103360672 other upstream 2282274 33118201 ~ 33230110 (+)
G90142 NA other downstream 198153 35784694 ~ 35785416 (+)
anapc13 anapc13 other downstream 929470 36516011 ~ 36517921 (+)
mt2 NA other downstream 944432 36530973 ~ 36531996 (+)
wfdc1 wfdc1,LOC102778323 other downstream 2435836 38022377 ~ 38034694 (+)
G90583 NA other downstream 2467968 38054509 ~ 38055564 (+)

Expression


Co-expression Network