G91943


Basic Information

Item Value
gene id G91943
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 286718 ~ 293940 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU123751
ggtaggaccaggctactgtcccagagtctggtaggaccaggctactgtACCATAGTCTGGTatgaccaggctagtgtaccagagtctggtaggaccaggctactgtcccagagtctggtaggaccaggctactgtactagagtctggtaggaccaggctaatgtaccagagtctggtaggaccaggctactgtcccagagtctggtaggaccaggctactgtACCATAGTCTGGTatgaccaggctagtgtaccagagtctggtaggaccaggctactgtcccagagtctggtaggaccaggctactgtactagagtctggtaggaccaggctaatgtaccagagtctggtaggaccaggctaatgtaccagagtctggtatgaccaggataatgtaccagagtcaggtaggaccaggctattgtaccagagtctggtaggaccaggctaatgtaccagagtcgaTTCTGCTTtttgaagatgttttttttcatcctcTTTCATCCGTACATTATCAAATTGCACGAAAACAATTGTTCCTCATCAATGTGCCTTGAGCTACGGTCCAGTCCTGAGAGGTTGCACGAGACCCAATGTGGAGAGTcttgtttcaatgttttcttcctctttctttatttcttaaatcatcCTCCAAACCGTGAGGTTTTAGTAGGAAACTGGAGCAAGCGTTAAAGGTCCACTGTGTAGGAAtctctcccatctagcggtgaaattgtattttgcattcaaacaaaCAGTGCTCTCTAATGCCTCGCTtttttcaaatgcgtgttgCAGCTAGGGTAGCtgttatgtaccaagaagctatgacaacatgtcttccaattttggcttttttggcgacgaggattccttcacctgtggctcggcataagtacgatcctccattatgaactaaagggCAGTGACGAGCGCCCTCTCGCTGATCTCCTTCTCcatttcagctggtttcagtcatgTGACACTGGCTCTGAACGATAAAACACGTTGTGGATTATAGCTAGACAGGTCGGCTAGCGCTTTATGTCGCTCTCGGCGATTACAAAAAGACGTGGAAGCCTCCGtggacttgcccgtccaatgtaaacacagataagaaattcttcgcttACGAAGATAAGTCAtatcattggcagaggtcattttacaccaatgaggacatatttatgaatgaagacattgattttagctgataaaatacttaaaaacactacacagtggaCCTTTTAAAGCTGAAGAGGGAACGCTGTGATTACCAGAATTACTAGCCGGTAATCTCTCAGTTTTAGGTTTTAAAGGCCTTCGCTGCACTTCTtcgccccccctctccccctaccCTTTCAACTCCCAAGTTATCTGCAGCGCTGAGAGAGACATCACAGGTGAAATCTACACCGGCTAAAATCAGGTCAATCATCTCCAGGTTCCTGCTAACAGATGGAAACACGgtgacattttgtgaaatgaGTCATGATAAGATCAGCCTTTATTGTCTCCTGTATATAgcggcacggtggctcagtggttagcactaggactacagttgcaAATTAGCCATCTGGCTATAActctggcgcatttacagaaatgttgattaaattaatgtgcattgtcctcaAATCAAATAAATTAATCTTATGGGATAAATTCATCTTGGGCAGTGGAGAAAACGTAAAAATGGCGACACatcgcacataaacacacaataaacatataGTAAACATgcataaaacataaacacaagacCCCCCTACCTTCCCCCACACTCACAGGAGAAAGAGAACCCACTGTTAGCGGTACAACCTTAGCTAAACGCCTAGTTTAGCCGCTAAAAAGGTTTCATTCAGGTTAGTTAAAAGATAGCTGCAAAGACACGCTACAACGTTAGCTTACGGGCTGGTGTAGCAGCTAAAAGTGGTTTGAGgaggttcaaaattagcaccatcttcTAGCCAAATGCTGGCTAAATATGCCAACGCATTCTCaatcccaactcgtaaaatacggacgcttgggcagtgtctctcagcgtcagaaaatctgcaaactttccctcAAGTTACCttctagcggtagctagctagcttggttaaatctttaaaaacaaatgtagttgttgtcttgcaatgtgtgaccctgcaagatccccagtctgTACATAGTATGACTTTAACGTTGTGAgctgtgagatggtgtcagactttagtctttttaaAGTCTGTTTTAAAAGCCTTCTCGTGTACGGTAGGCATTAGTTGTTAacccctgtgttttttttaaatcagaaaaaTCGATATcttacaaccaaattgcccaaaaaataaCCCATTTCACGTTCATGGCAGgcaaaattaatgattacttgaactcaaatggttttaaaacagcatcctgactgAACTTTGACATAAAGTTTCACGCAACATCCTCTGATGTTGACTATTAGTCAAAACAATTCATAatttatgctttttttaaactcataaATTAGGCATAGTGTCatttaaatgaggtttattgaccatgaattcaataattttataatttaaaaaagcccTATAGCCCtgaaatgtcggaaaaagtgcaaaaaaaatttTGTAAGCTTGTAATACATgtaagctaagctaagttaaGCAGTCTCAACTCTTTGGTTCGCTGTAGCAGCTACAACAGTTTGTTTGCAAACCTTCGTTGGAATTATAAATGTGTGGGATGACAAGAAAAATAGGGACATTTAAACACATCATACTCATTTCACAAAATGTCCTGATAGCAGTATCTTGATAAACGAGACGGAGCTTATGTAattataatatttaataataatattacagtTCTGCTGACCGTGTTTACCCCCATCCATCCCCTTCATCCTCTCCTTCGTCTGATGAGATGATTTAGTTAATTTCCGTTGCTATAATCTCCGAAAAACTAAAATTTTCAAGTCTTCCTTTTAGTTTTTGGTTGGTTCTACTTTTTGTTCCCAGAAATGAATAACGAGGACATCAAATATGCAATACCTGCTTGCACTCACTTGGACTTATCTTTCGTCTTACGTTCTTTCTCTATACTTTCAACCAAAGTGAGCGTGCACTCGACTGGCATCGTGCTCCGTGGTCGGTCCCTAAAAATGGTGAAGCCAGCCCCGCGGCGTTAGCGTTGCTCCAGCCAAGCTGAGCAACCGACGCTCGGGGAATCCTAgttccttccctccttctttccttcccttccttcctaAGCTACCTGTTTTGATAAACTACCAGACGGCCGCAATATttacatttgggtctctctttcctaaagtttttttttttatttctttggtCACAAGCAAAGCCTTAAACAAGTCAAACTTCTTCTCCATCGCGCAGAAAACACAGTTTATATCAAAGACATTTTTGATGACGTCCAACATTTTAACCACGCCCTGCCCTGCTTTCGCACAACCCCAAGCAAACTCCTAAAATACGAACGCTTGGTCAgcgtctctcagcgtcagatatgcaaaaaaatatcccttcagtgtgtgtgtagaacgcaccggacagagcagcagctacgcagcgctgtaagatgatgtagtattaaagcgtaactctcgccaaaatgcaacctagggtctttttgtgaatggaCCCGAGTCagactttcgtttaaaagcataattaggacggaagagccacttttaagattgaccgtatcttcgtttttcggtcaaatggccttttgaatgggagtgctaggggcactgcTATGATAACATcaaaaatcactattttttaaaacattaattagTAGCGACActacatgagactttgctccaagtatcaccaggggctctgcGCATGAACTCAGCATTGGGAACATGGGTTGTGTTCACAGAGTTTACTTTTCAATTACTCACTTTAGCCGTTGTTTTTTCCGTTCGCCGTCCATCTCGCCGATCAAAAAAGATATTGACCTTGTGGTTTAAAGCAAAGATCTTTTCGTACCTTCAAATAATGTTTACAAAATCGTTTTCAGTGGtccatcaactcgtaacagggtgaacggcacttctgcattagCTTTGCGGCTCTCTACctgctataaccgcactatgcaagtttaccagatcgggtagcggatctgtagttccaatgaTGGTTACGGTAACggtaatatatacagtatataccgaCATAATGAGACAATTCCTCTTCCAAccaaaagcccaatattcggccgaatccgaaGCCATCCCTAGTCCAAAGTGACACCAGTAGTCCTGACCCAGCGCGCTTAGATCTGACGCTAGCGCCAATAACAAcaacctgaccaagcgtccgtccTTTACGCGAGGGGAGTGAGAAGGTGTTGCTTCGGCAGAGGTTTTGGTGAATAAATTGTTTACCCGTTCTGTGTTTAGTCCGTCGGACAGCCGCGGCGTGATGCCGTCAGCTGCGATGGTTTAGTAGTTCCACTTGTGTGGGTTGTGCGTTTTCCTcttggggccctatcttgcacgcggcgcagcgcaaagcccgaaacaagtgtctttgctagtttaagaccgacccagttgtcaatttcccgtccagcgcccacattgtttaaataacaaatgcacctgcgcccttCTGTGGACCCATGGGCATGCTGGgattacagggaggtgtgttcaggtgcattctgggcgtgctggtcttacagggaggtgtgttcaggtgcattctgggcgtgctggtcttacagggcggtgtgttcaggtgcattctgggcgtgctggtcttacagggaggtgtgttcaggtgcattctgggcgtgctggtcttacagggaggtgtgttcaggtgcattctgggcgtattgatatcttgaggcagcgcgaagtgatggcgccattgaccaacaaaaacctggtctaaagtcaataacgcagcatttcattgttattttaacagcaaattagtaaaatgctcctattggctcgtgcacagcgcgcacactatgcttgttacacacacagggacacacacatgcagaagattacacataaaaatattacggtgcaaatcctccatcataacagcaatgctccaaggtcattaaactagcaaaagtggatttggacacgccctaaacgcaccttgCGCCAGGCGCTGCACGCCGTGacctcagatcgttaaaatagaggCCCCTAGTGTGACATATTTGTCTTGTCTCTCTGTTCTTGCCTACCCTTTAGCCATGCGTTGGGCATTACTTCCTTAATTATCTGCACTAAATATAAAATTAATGACAATAGTGGAAAAAGTATTGcatataaaaaatttaaaatacagcTTCCAGGGCTTAAAAAAGAGCGaagggaattaaaaaaaaatttaaaaaaaataaaaaattgcacGGACATTTTTTGAAGTGTCACAAAATCCTTGTGAAACAGCCTATAGCATCTAATCAGCGACTTTTGGCTGTGTTGTGTGTAAGATAAACGACAAAATTGCACCCTttttacagaaagaaaaaaatgaacaagAGAATATAAAAGCAATAGTTTgggcagtgtgtttttttttttttgttcttgtgtttgtgtgtgtaatttagttcggttacactttacttgaaggtatctacatgagagtgacatgacactgtcatagaCATGTCATAACCATTATAAACGTCTCAAAGCGTTGCAGTCGACTCCCacaggtccaaaaagtgcctctgAACACGCCGAAGAGACGCCGATTTGAGCGtgcgttctgcgcgtgcgcgagaagGTAATAACAGCAGGCGCCGCTAATCTGTATTAATCgttaaattgctgttgaacgacaaaaacaaccatcagatgggaaaagggtatttcacaataactttgaatgcaccacgaggctacctgttgtAAGTGAACGctgtcccgctgttggaatcctctacggTGAAAtaacagtcacactttacaccgtttaacgTTAGCATTTTAACcgctgtgtttaatccagctgctagctaacggtaggctaacgttacctgccttcaggtgtagtgtaaagtcaggcaccgaaatgaggaaccgaaattttcgttcttattcggccTCGTTACTGCCGTTTAGGTCggcacgtttcggtacccaaccctagtcacgAGTTCATGATGACAGTgccatgtgttcatgacagtgtcatgtgtttatgacagtgtcatgtgtttatgatgacactgtcatgtgttcatgatgacagtgtcatgtgttcatgacagtgtcatgtgttgtgtcatgtgttcatgacagtgtcatgtgttcatgacagtgtcatatgttgtgtcatgtgttcatatgacagtgacatgtgttcatatgacagtgtcatgggttcatgacactgtcatatgttgtgtcatgtgttcatatgaacacatgacacaacacatgacactgtcatatgaacatatgacactgtcatgaacatgtgaCACTGTcatatgaacacatgacacaacacatggcactgtcatgaacacgtgacactgtcatgaacatgtgaCACTGTcatatgaacacatgacacaacACATGGcactgtcatgaatacatgGCACTGTcatatgacactgtcatgaacaggtgacactgtcatgaacacattaCACTGTCAAATGAACACATGACAGTGTTATGAACACATGGCACTGTCATATGACCACATGACacaacacatgacactgtcacgtcactcttatgtagctaCCTTCGATTTAAAGCGCGACCTTTAGTTCTGGTACGGCAGAGAAAGGGTTAGCTCTTAACGGGACAGTAGAGGGGGCGGAGCGTGGGGGAGACATGTTTGTAATGTTGTATAGTTTTATTAATTACACTGATTTTAAAGCTGCCCTATTTtataatgcaggactttttgtaacattgataaaatgaggaaaaaatagTGTTGTGAATTTTTCTGATTGTTTGTATCGAGGCCACATTATTACTAGAACTGttcttttggggggggg

Function

NR:

description
tau-tubulin kinase 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123751 True 7032 lncRNA 0.43 3 286718 293940

Neighbor

gene id symbol gene type direction distance location
LOC120566001 nfia coding upstream 87993 381933 ~ 453128 (-)
LOC120565555 NA coding upstream 248098 542038 ~ 549410 (-)
LOC120565843 NA coding upstream 411927 705867 ~ 707328 (-)
LOC120565842 NA coding upstream 414094 708034 ~ 710213 (-)
LOC120565536 LOC104936604,LOC103369104,LOC102306071 coding upstream 469180 763120 ~ 775239 (-)
G91948 NA non-coding downstream 15936 268885 ~ 270782 (-)
G91912 NA non-coding downstream 85921 199402 ~ 200797 (-)
G91933 NA non-coding downstream 134744 151573 ~ 151974 (-)
G91928 NA non-coding downstream 157536 107291 ~ 129182 (-)
G91922 NA non-coding downstream 191399 92698 ~ 95319 (-)
G91949 NA non-coding upstream 12294 306234 ~ 306643 (-)
G91958 NA non-coding upstream 43468 337408 ~ 447161 (-)
G91963 NA non-coding upstream 57803 351743 ~ 353360 (-)
G91972 NA non-coding upstream 77801 371741 ~ 372252 (-)
G91984 NA non-coding upstream 139015 432955 ~ 433864 (-)
G91938 NA other downstream 14052 178709 ~ 272666 (-)
G91929 NA other downstream 176523 109660 ~ 110195 (-)
G91909 NA other downstream 204844 80795 ~ 81874 (-)
LOC120565889 LOC101163152 other upstream 259767 553707 ~ 566721 (-)
patj patj other upstream 302297 596237 ~ 635055 (-)
G92012 NA other upstream 390019 683959 ~ 684519 (-)
LOC120565586 tmem259,LOC102799979 other upstream 668652 962592 ~ 982757 (-)
LOC120565934 NA other upstream 808442 1102382 ~ 1129854 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G42244 NA non-coding NC_035901.1 CM008304.1 13095821 ~ 13099379 (-)