G96140


Basic Information

Item Value
gene id G96140
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 17177287 ~ 17183618 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU129675
cacatacacatatatatacacacacacacacacacatatatgcacaaatacacagacatgttATACTTAACATTTCTACAGTGAAAAAATAGAATGTCTTTTAACGTAATATGAACAAATAAGCATTTCTCTTTTCCtgctaatttaaaaaatgtgatacAACATCTCTGTTAAAAAACTAaaccaaaactaaaataaaaagtaaactatGTAATGTAAAATAAGTCCTCATAATACAACAGTAATGTTTTCATAATGTTACAATAACAATAAGGCTTTTTTGGAAATAAGAAAAGATTACacacagttctgtcaatcactCTGGTTTTTATGCACACCCTTTGGAAACCTCCACAGAATCTGCACACAAATCTGTACCAAAGGACTGATCTCAAGATTTCAAAAGCTTGATTTTTCAGACACATATACTTTAGTGCGTCAAATCTGACCTGCAGTTGTTTTGGGGGTATTTGTTTcaagttttgtttcttttttccttaGGCATGTGCAAGTAACTTGTACCGAAGAATTTCATTATCACATCATGGCATTGatatccaacatggctgcctgGTCTGGCGGTGTCACCCATGGTGACATCATCTCTAAAacggaggggaaaaaaacccaAAGCAACTAGCCTACTTTGTTTATCCACCTCTtaccaaacacacatacagttgaACTAAAGGCCAATTTTTCCAACCACATAAACATACAGCTTTGTAACTGCAACAGGCCTCAGCCACTCTTGAGTGTCTTATACAATAAAATAGATGATTATAGAAGAGGctggaaaaaaagagatgtaAAAAAGACCGGTGGACGATGTTGTCATGTGAATGCGCTTTCAGTCATGCCTGCCTTGGCGCGAGTGGATAGCAGAGCTGGCATCTTTTGTTCGTCAGTTTCCTCTCCCATAACAGTCACACACTTACAGCATACACGAGATAAGCAGCATGTTTGGTTTTgacgaaaaaaagaaaagaaaaaaaaaaagagataattCCTTATAAGACAAGTCTGAAACAATGATGATGAACGTTGGTCACTGTACACAAAGAAAGCTCCGACTCTGCGGCAATCCTTGCATGGTTGTTCCGTTTGTTCCAAAGCTTCTCGCCCACCAGGTTTATCTCTTGTTCAAAATGGTGGATGTTAACACCGAAGCCCCACGATGCAATGGTTCCAAATAGAggagtgattgtaaaaaacatGGGACACGGTTGCCATTTCTCCCACCTTGACCACCCGCAGCTTCTTGCAACAGCCAAGGTTTTCCTCCGATTTCTCTGGTGACTGAGACACGAGCCTCCTGGGGCACTTCTTAAATACACTGTGGTACTTTTCAACATCACCTGGCTTGGGATACTGATTTTACACAAGTTCACAATTCATGAAACTAAATGTGTTGCTGCTTTCTTCCCCACAACCACTGACAATGCCTTGTCTAAGCTCTTAGCGCTTGAGAACAGGCAGTTGTGTGATGTGTACTTTAGTAGTTGAGTGTTCTTCCGCACAAATTAGGCATATCATTAGTGggacagtgtaaaaaaaaacaactcaaggTTTACTTGATGCTAGTGTTCTCGTGCTAGTTatgtttccactttttttttttggatttacCAGAGGTTGGGGAAAACCATGTGTGTTCACACAGGCAACCACAGTTTGGTCATTTCTCTGGATATCACTCACCAAATTTATTGATAGAAATACTTgaaccaccccccacccccccccgtTTACACCCAggcatataaaacaaaaacaaaaggaagtCACCCCGTCTCGGCTACATCCATCTGCCTCTcattgatttttgttgttgccttCTCCTTCATTAACTGTTGCTTGTTACCGTTGTATCACAAAGATATTTTTGAGAAGAGAAATGTCCACGAATGTTTACAATGTCCTCCACATTGAAACACTTGAGGTAAGGTAAGCAGTCTGACACTTTGATCGATTCCCGCCCCACAGCCTGAGCCACAGCGTCTGGTTCCTCTGCCGatgaggattttctttttctttgatgATGGGCAATTTTCCTCGTTTCCTCACGAAGGGTCTCTTGGTCGAATTGGAATTTTTCTCAACAAGTTGGTTGGGCGTTGTTTTAAAATCTACAGTAGGATCCTGTTTGGTGTGTCTGAATTAGTGATGGTGTTATTGTCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129675 True 2182 lncRNA 0.40 2 17177287 17183618

Neighbor

gene id symbol gene type direction distance location
jak3 LOC103355554,LOC104958015 coding downstream 922850 16226826 ~ 16254437 (-)
LOC120565011 NA coding downstream 1051568 16117372 ~ 16125719 (-)
klhl26 klhl26 coding downstream 1100603 16070335 ~ 16076684 (-)
crtc1b crtc1 coding downstream 1108911 16048431 ~ 16068376 (-)
LOC120565970 med26 coding downstream 1159711 16011715 ~ 16017576 (-)
gipc3 gipc3,LOC100702370,LOC102212133 coding upstream 36896 17220514 ~ 17231048 (-)
lim2.2 LOC100701835,LOC102794991,LOC101468118,LOC101061816 coding upstream 73686 17257304 ~ 17261024 (-)
LOC120565629 LOC104945263,LOC103364913 coding upstream 79746 17263364 ~ 17277405 (-)
camsap2a camsap2 coding upstream 94586 17278204 ~ 17337273 (-)
LOC120565477 NA coding upstream 123248 17306866 ~ 17309026 (-)
G96127 NA non-coding downstream 50539 17126352 ~ 17126748 (-)
LOC120565886 NA non-coding downstream 122051 17052284 ~ 17055236 (-)
G96098 NA non-coding downstream 277423 16899435 ~ 16899864 (-)
G96089 NA non-coding downstream 299206 16877859 ~ 16878081 (-)
G96074 NA non-coding downstream 612390 16563336 ~ 16564897 (-)
G96142 NA non-coding upstream 5862 17189480 ~ 17189720 (-)
G96143 NA non-coding upstream 12311 17195929 ~ 17196165 (-)
G96151 LOC103364910,LOC104945262,LOC104928005 non-coding upstream 52722 17236340 ~ 17249523 (-)
G96216 NA non-coding upstream 427003 17610621 ~ 17610992 (-)
G96247 NA non-coding upstream 501976 17685594 ~ 17701131 (-)
smim7 smim7 other downstream 1157069 16018032 ~ 16020218 (-)
LOC120565484 LOC104958137 other downstream 1719386 15387888 ~ 15457901 (-)
G95680 lsm4,LOC106613629 other downstream 1794425 15379507 ~ 15382862 (-)
LOC120565366 LOC103365555,LOC102781831,LOC102293722 other downstream 2003538 15163458 ~ 15173749 (-)
lhx9 lhx9,LOC102787388 other downstream 2383829 14778993 ~ 14793458 (-)
G96213 NA other upstream 371479 17555097 ~ 17555736 (-)
G96267 ncl,LOC106535335 other upstream 682999 17866617 ~ 17875325 (-)
psmd1 psmd1 other upstream 1836360 19019978 ~ 19061893 (-)
LOC120565857 NA other upstream 1879257 19062875 ~ 19066644 (-)
negr1 negr1 other upstream 2571737 19755355 ~ 19950334 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location