G97896 (LOC104918463,LOC104952282)


Basic Information

Item Value
gene id G97896
gene name LOC104918463,LOC104952282
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24511971 ~ 24513033 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU132089
CGgcattatattacattttagGTGAATGAAAATGAACAAACTTGCATAACAAGGATTTTTATTTTAGGAGTCAGTTTTAGTGCTTTAACAGAATCCAAAGCAAACAGTTAAATGCAGAATGGTGTATTTGAATTAAATGATGGTTATACAGAAGGTTCGTTTTGGAACTGATAAATAAAGTCAGACATTACAGATGAGATGCGGgttcacacttattttttgtcGTCAGACCAGGTGATCTCATAGTCACTGAAGGCACTCTTCAATTTCTCAACAGACACAGAATGGTCTGCTTTACCAAACGCAGTTGATTCTCCAAAAAcccttagttttttttcttggcTGTTGTGCTCTATCTTCCCTCCTCCAAGGCATTTACACTCCATTCCCATGGCCTCCATGGCTGGATTGACCTTCTCAAATATATGATTGTGATACTCTGCACTTTTTGTGCCTCGGACTATGTCTTTATGCACATCGCCATCTTTCACTTTCACTCGGACCAGTATGTACTTAAATGCTCCTTCTGGATCAATCTCTACAACGGGGATTTTAGCTAGAGCGTCTGCCATTGCGGCTGTAGCTTTTAGTTAAAGCACCGGAGACCCTCAGGCTGTTCAGAGGTCTACCAACGACAGACAACAGCGGTGCGTTCTGGTTCTCACAA

Function

NR:

description
PREDICTED: 14 kDa phosphohistidine phosphatase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132089 True 667 lncRNA 0.41 3 24511971 24513033

Neighbor

gene id symbol gene type direction distance location
scyl3 scyl3 coding upstream 23220 24481703 ~ 24488751 (+)
foxd2 LOC104918470,LOC103372816,LOC100707784 coding upstream 223282 24287104 ~ 24288689 (+)
foxe3 foxe3,LOC104952243,LOC102794361 coding upstream 230907 24278396 ~ 24281064 (+)
ankrd24 ankrd24,LOC106918341,LOC106947862,LOC102780339,LOC103142601 coding upstream 328943 24168358 ~ 24183028 (+)
s1pr3a LOC104942240,LOC103398206 coding upstream 374457 24133664 ~ 24137514 (+)
sele NA coding downstream 2401 24515434 ~ 24519540 (+)
LOC120565835 NA coding downstream 7601 24520634 ~ 24524358 (+)
LOC120566076 NA coding downstream 11440 24524473 ~ 24531588 (+)
atf6 NA coding downstream 77293 24590326 ~ 24627700 (+)
LOC120565979 NA coding downstream 133837 24646870 ~ 24652453 (+)
LOC120565067 NA non-coding upstream 146796 24309609 ~ 24365175 (+)
G97807 sac3d1 non-coding upstream 255890 24254470 ~ 24256081 (+)
G97789 NA non-coding upstream 298112 24211860 ~ 24213859 (+)
G97788 odf3l2,LOC104949085 non-coding upstream 302681 24208229 ~ 24209290 (+)
G97728 NA non-coding upstream 420652 24090543 ~ 24091319 (+)
G97938 NA non-coding downstream 125433 24638466 ~ 24642085 (+)
G98014 LOC106904844,LOC106963772,LOC102314236,LOC103463589,LOC106513892,LOC102207185,LOC100706092 non-coding downstream 271763 24784796 ~ 24785342 (+)
G98015 NA non-coding downstream 274298 24787331 ~ 24787540 (+)
G98019 mknk1 non-coding downstream 320404 24833437 ~ 24835517 (+)
G98021 NA non-coding downstream 324580 24837613 ~ 24875666 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 303830 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 861458 23631119 ~ 23650513 (+)
G97596 lpl,LOC108280930,LOC105906969 other upstream 1034153 23474782 ~ 23477818 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 1131596 23378731 ~ 23380375 (+)
pole4 NA other upstream 1188487 23321464 ~ 23323484 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 235984 24749017 ~ 24765225 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 268885 24781918 ~ 24783881 (+)
elovl1b LOC106963699,LOC101078639 other downstream 339254 24852287 ~ 24873916 (+)
G98194 NA other downstream 1019792 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 1217192 25730225 ~ 25738789 (+)

Expression


Co-expression Network