LOC120565979


Basic Information

Item Value
gene id LOC120565979
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24646870 ~ 24652453 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812147.1
TTTCCGTGGAGATAACTTATTTCCGAACAAGAAGGCGTCCTGTCACAAAATGCTTCCCCTAACAACTATAAGGAAGTTTGTGAACACGGTGTTTTGtcgtattttttaatttatgtttCTGCCATCGCTCAAGTTATAGCTAATCTAAAAATGGATTCCAAGGTTCCTGAAAATAAAGTGTCTCGCCCGTTGAGACGATCGACAAGGCAGTCTTcgggtaacgttaacgttaaagCTTCATTAGTATTGGGTTTTGAAGCGACGCCCAGAGGTCCTCTAAAACGGACCAGAAAGGGGTTAGAAAGCCAAGCACCTTTAACAACTGTCAATGGTTCCAGAGATGTGGAGACTGGCTTAGAGGATGAAGatTCCCCTAGCAAGAAGAGCAGGCTGGAGACTGGAGGAGCAGTGGGCGGCAGTGGTGATAAGAATGACACTGAGATGGATGTCCAGGAATCAGTTGAAGATCTGGAGGAAAATAAAGATGAAGACCAGGAAATGGATATTATACAGGATTCCTCTCCTCTCACTCATCAACCAAAGGTTGAAAGGTGCCAAGGCGCTTTTGGAGATATGAATTTATCCCCTCGTGTAGTGCTTCATGAATGCTGCAGATCCAGTCATGCTGTACATGAAGATGCAGACTTGATGAAAACCAAGACAGttAAACCATCAACAAAAGCACATGTACCCCCCACCAAGTCTACTGCGCAAATCAGACCACCGGCAAACCGACATGATGTGCCAATCCTTAGCATGGATGACTACAAGAGGACGATGGAGGCCAAAGCCAAGAGCACTGGTATACTGGCAGTTAACCACCATGTCCCAAGCGCGTATCCAACCTCGGAGAAATCCTACACAACCCGACAGCGTGTGAATAACATACCGACTCGAGAAGAAACCGTTCAGCAGAGAAAACAAGGGATGAAGAAAACCAATGTTATCAAGGGAAGCTCTGGATATTCCTGCCCAGGATTCCTGTGGTGTTTATGGCGTTTGGTTCTCCTTGTGTTGCTCTGTTCTGCCGTCTTGCTGGCATACAAAATCATCCCTGTACTCAAAAAGACTGCAGATGGAGGAATGCATCCATCCAGGGCTTTAAAGCCAGAAATGTTTGCAGATCAGTTCTCTCTTCTTGAGACTCAGTTCCCTAGTCAGCGCCCTGAGTTGTGGCAGAGGAGCAAGATCCACCTGGAGAATCATCTCGAAACAGCCCATCCTACAGAGCCAGTGAGTCTGATCTTTACAGCAGGCCAAAGAGCTGAGACCACACTGCGCTGCCTGGCTCAGGGGCTGGCCTCCGCCTTCTCGTCTGCCCTCAACGCCTCCGTCCTCCACATCGATGGAGCCAGCAAAGCCGGCCAGGACAGCGATGAGGTGAAGCTGGAAATTGACGGACAGTTTCGAGCAGCCTTCGACGGAGACAAACCCGTGGCTGTAATTCATCGATTCGAAGAGCTGCCTCCAGGCTCCACCCTTATTTTTTATCGCTACTGCGACCACGAGAACGCCGCCTACAAGCGGGTGTTCTTGTTGTTTACTGTGCTACTGCCTCAAGATGAGGTCAAGGATAATCATAGTCTGAAGGAAGTGGAGGAGATGGTGCAAGAATATCTCAAGGTAAAGCTGGTGGACTCCAGCAACAAAACTGGCTTCAACGAGATGGACACTGACAAGTTCGGTGGACTGTGGAGCCGCATCTCCCATCTTGTCTTACCCGTGGTGTCTGAGAGGGAAGTAGAGCAGAAAGGATGCTGATGAACCAAGCTGGCCATCAAAGAGGATGTCACAATACCGCTTTGGACCAGTCTGATCCTCCTTGGCACTGGGCAGGAGCTCTGAAACCGAGAACATGTAAATACAATGTGCGTGTTGTTACATTTCACATATAGATTTTAGTTCAAATGTTTAAAGGTTGTAATAATCTCTCTCTGTTAGAGATGAGATTGTTCTCATGCTGTCTAATGTTGATGATTTAGCACTGAGTTTTTACACGTGTACATGTACAGGCTTTTGCGTAAGGATGTTACAGTCCCATCATCATTCCACTTCCAAAGTAGGTTATGAAATGCAGATTCTCATGCAGATTTAGTATACTATATACATAGTTGGATTGTACCATAAATCTGTATTGACAGCATGTTGTTCAACAGCTTTTTAATCCATCTAAGAAGAGTTTTTGGTGAAAGATCAGCATGGATTACACTGGGTCCTTCTTTAGAAactaataaaacatgttttattttctgtgggCATCTTTGTTTTAGATGCAAATTCATATTTCTTGTTCTGTATCGAATCTCAACTGATGGCTTCCTTAATATTTCTGTTGAATGTCCCCATGGAGATGTGTGTACCATTGTTCATTTAATTCTCTTGTGTGCGCAATTGCATTTGCACTAAAACTGTATGCTTTAACTATACATCTATACAAGAGTGCTGGCTTTTATTaagaaatattttatattcttagttttttttctgaatgtgtatatttgtgatatgttctctctttccttgattggaatattttttgatagctgtgtatatatattgaatATGAAAAGATTTGTTCTTTGCACCTGATGTCAAGTAACCACTGAAATGTACTTACAATGTTAGAAACATACAGATTTTCACCAAGTGATTTGGATTTGTACAAATTAAATATTACTAAATATTAGTCAGCAAGTCACGTAATGTGCCTTAAACACCCATATGGAGAAGAGACTACTGTATCTTGACAACTTCAAAACCCAAACAAGGTTTCTTGCAGAATATTTTGtgcaaattaatttaaatttcaaaaataCAAGAAAGTTATTTCCTGTGTTCATTCCTTGTGTGTTATTCTGAGATGAATTTTGTTTTGCTCACATGAATATGTGTATATTTTCAATAAAGATTATTTTGATAACTAGAA
>XM_039812148.1
GTTTCCGTGGAGATAACTTATTTCCGAACAAGAAGGCGTCCTGTCACAAAATGCTTCCCCTAACAACTATAAGGAAGTTTGTGAACACGGTGTTTTGtcgtattttttaatttatgtttCTGCCATCGCTCAAGTTATAGCTAATCTAAAAATGGATTCCAAGGTTCCTGAAAATAAAGTGTCTCGCCCGTTGAGACGATCGACAAGGCAGTCTTcgggtaacgttaacgttaaagCTTCATTAGTATTGGGTTTTGAAGCGACGCCCAGAGGTCCTCTAAAACGGACCAGAAAGGGGTTAGAAAGCCAAGCACCTTTAACAACTGTCAATGGTTCCAGAGATGTGGAGACTGGCTTAGAGGATGAAGatTCCCCTAGCAAGAAGAGCAGGCTGGAGACTGGAGGAGCAGTGGGCGGCAGTGGTGATAAGAATGACACTGAGATGGATGTCCAGGAATCAGTTGAAGATCTGGAGGAAAATAAAGATGAAGACCAGGAAATGGATATTATACAGGATTCCTCTCCTCTCACTCATCAACCAAAGGTTGAAAGGTGCCAAGTGCTTCATGAATGCTGCAGATCCAGTCATGCTGTACATGAAGATGCAGACTTGATGAAAACCAAGACAGttAAACCATCAACAAAAGCACATGTACCCCCCACCAAGTCTACTGCGCAAATCAGACCACCGGCAAACCGACATGATGTGCCAATCCTTAGCATGGATGACTACAAGAGGACGATGGAGGCCAAAGCCAAGAGCACTGGTATACTGGCAGTTAACCACCATGTCCCAAGCGCGTATCCAACCTCGGAGAAATCCTACACAACCCGACAGCGTGTGAATAACATACCGACTCGAGAAGAAACCGTTCAGCAGAGAAAACAAGGGATGAAGAAAACCAATGTTATCAAGGGAAGCTCTGGATATTCCTGCCCAGGATTCCTGTGGTGTTTATGGCGTTTGGTTCTCCTTGTGTTGCTCTGTTCTGCCGTCTTGCTGGCATACAAAATCATCCCTGTACTCAAAAAGACTGCAGATGGAGGAATGCATCCATCCAGGGCTTTAAAGCCAGAAATGTTTGCAGATCAGTTCTCTCTTCTTGAGACTCAGTTCCCTAGTCAGCGCCCTGAGTTGTGGCAGAGGAGCAAGATCCACCTGGAGAATCATCTCGAAACAGCCCATCCTACAGAGCCAGTGAGTCTGATCTTTACAGCAGGCCAAAGAGCTGAGACCACACTGCGCTGCCTGGCTCAGGGGCTGGCCTCCGCCTTCTCGTCTGCCCTCAACGCCTCCGTCCTCCACATCGATGGAGCCAGCAAAGCCGGCCAGGACAGCGATGAGGTGAAGCTGGAAATTGACGGACAGTTTCGAGCAGCCTTCGACGGAGACAAACCCGTGGCTGTAATTCATCGATTCGAAGAGCTGCCTCCAGGCTCCACCCTTATTTTTTATCGCTACTGCGACCACGAGAACGCCGCCTACAAGCGGGTGTTCTTGTTGTTTACTGTGCTACTGCCTCAAGATGAGGTCAAGGATAATCATAGTCTGAAGGAAGTGGAGGAGATGGTGCAAGAATATCTCAAGGTAAAGCTGGTGGACTCCAGCAACAAAACTGGCTTCAACGAGATGGACACTGACAAGTTCGGTGGACTGTGGAGCCGCATCTCCCATCTTGTCTTACCCGTGGTGTCTGAGAGGGAAGTAGAGCAGAAAGGATGCTGATGAACCAAGCTGGCCATCAAAGAGGATGTCACAATACCGCTTTGGACCAGTCTGATCCTCCTTGGCACTGGGCAGGAGCTCTGAAACCGAGAACATGTAAATACAATGTGCGTGTTGTTACATTTCACATATAGATTTTAGTTCAAATGTTTAAAGGTTGTAATAATCTCTCTCTGTTAGAGATGAGATTGTTCTCATGCTGTCTAATGTTGATGATTTAGCACTGAGTTTTTACACGTGTACATGTACAGGCTTTTGCGTAAGGATGTTACAGTCCCATCATCATTCCACTTCCAAAGTAGGTTATGAAATGCAGATTCTCATGCAGATTTAGTATACTATATACATAGTTGGATTGTACCATAAATCTGTATTGACAGCATGTTGTTCAACAGCTTTTTAATCCATCTAAGAAGAGTTTTTGGTGAAAGATCAGCATGGATTACACTGGGTCCTTCTTTAGAAactaataaaacatgttttattttctgtgggCATCTTTGTTTTAGATGCAAATTCATATTTCTTGTTCTGTATCGAATCTCAACTGATGGCTTCCTTAATATTTCTGTTGAATGTCCCCATGGAGATGTGTGTACCATTGTTCATTTAATTCTCTTGTGTGCGCAATTGCATTTGCACTAAAACTGTATGCTTTAACTATACATCTATACAAGAGTGCTGGCTTTTATTaagaaatattttatattcttagttttttttctgaatgtgtatatttgtgatatgttctctctttccttgattggaatattttttgatagctgtgtatatatattgaatATGAAAAGATTTGTTCTTTGCACCTGATGTCAAGTAACCACTGAAATGTACTTACAATGTTAGAAACATACAGATTTTCACCAAGTGATTTGGATTTGTACAAATTAAATATTACTAAATATTAGTCAGCAAGTCACGTAATGTGCCTTAAACACCCATATGGAGAAGAGACTACTGTATCTTGACAACTTCAAAACCCAAACAAGGTTTCTTGCAGAATATTTTGtgcaaattaatttaaatttcaaaaataCAAGAAAGTTATTTCCTGTGTTCATTCCTTGTGTGTTATTCTGAGATGAATTTTGTTTTGCTCACATGAATATGTGTATATTTTCAATAAAGATTATTTTGATAACTAGAA
>XM_039812149.1
TTTCCGTGGAGATAACTTATTTCCGAACAAGAAGGCGTCCTGTCACAAAATGCTTCCCCTAACAACTATAAGGAAGTTTGTGAACACGGTGTTTTGtcgtattttttaatttatgtttCTGCCATCGCTCAAGTTATAGCTAATCTAAAAATGGATTCCAAGGTTCCTGAAAATAAAGTGTCTCGCCCGTTGAGACGATCGACAAGGCAGTCTTcgggtaacgttaacgttaaagatTCCCCTAGCAAGAAGAGCAGGCTGGAGACTGGAGGAGCAGTGGGCGGCAGTGGTGATAAGAATGACACTGAGATGGATGTCCAGGAATCAGTTGAAGATCTGGAGGAAAATAAAGATGAAGACCAGGAAATGGATATTATACAGGATTCCTCTCCTCTCACTCATCAACCAAAGGTTGAAAGGTGCCAAGGCGCTTTTGGAGATATGAATTTATCCCCTCGTGTAGTGCTTCATGAATGCTGCAGATCCAGTCATGCTGTACATGAAGATGCAGACTTGATGAAAACCAAGACAGttAAACCATCAACAAAAGCACATGTACCCCCCACCAAGTCTACTGCGCAAATCAGACCACCGGCAAACCGACATGATGTGCCAATCCTTAGCATGGATGACTACAAGAGGACGATGGAGGCCAAAGCCAAGAGCACTGGTATACTGGCAGTTAACCACCATGTCCCAAGCGCGTATCCAACCTCGGAGAAATCCTACACAACCCGACAGCGTGTGAATAACATACCGACTCGAGAAGAAACCGTTCAGCAGAGAAAACAAGGGATGAAGAAAACCAATGTTATCAAGGGAAGCTCTGGATATTCCTGCCCAGGATTCCTGTGGTGTTTATGGCGTTTGGTTCTCCTTGTGTTGCTCTGTTCTGCCGTCTTGCTGGCATACAAAATCATCCCTGTACTCAAAAAGACTGCAGATGGAGGAATGCATCCATCCAGGGCTTTAAAGCCAGAAATGTTTGCAGATCAGTTCTCTCTTCTTGAGACTCAGTTCCCTAGTCAGCGCCCTGAGTTGTGGCAGAGGAGCAAGATCCACCTGGAGAATCATCTCGAAACAGCCCATCCTACAGAGCCAGTGAGTCTGATCTTTACAGCAGGCCAAAGAGCTGAGACCACACTGCGCTGCCTGGCTCAGGGGCTGGCCTCCGCCTTCTCGTCTGCCCTCAACGCCTCCGTCCTCCACATCGATGGAGCCAGCAAAGCCGGCCAGGACAGCGATGAGGTGAAGCTGGAAATTGACGGACAGTTTCGAGCAGCCTTCGACGGAGACAAACCCGTGGCTGTAATTCATCGATTCGAAGAGCTGCCTCCAGGCTCCACCCTTATTTTTTATCGCTACTGCGACCACGAGAACGCCGCCTACAAGCGGGTGTTCTTGTTGTTTACTGTGCTACTGCCTCAAGATGAGGTCAAGGATAATCATAGTCTGAAGGAAGTGGAGGAGATGGTGCAAGAATATCTCAAGGTAAAGCTGGTGGACTCCAGCAACAAAACTGGCTTCAACGAGATGGACACTGACAAGTTCGGTGGACTGTGGAGCCGCATCTCCCATCTTGTCTTACCCGTGGTGTCTGAGAGGGAAGTAGAGCAGAAAGGATGCTGATGAACCAAGCTGGCCATCAAAGAGGATGTCACAATACCGCTTTGGACCAGTCTGATCCTCCTTGGCACTGGGCAGGAGCTCTGAAACCGAGAACATGTAAATACAATGTGCGTGTTGTTACATTTCACATATAGATTTTAGTTCAAATGTTTAAAGGTTGTAATAATCTCTCTCTGTTAGAGATGAGATTGTTCTCATGCTGTCTAATGTTGATGATTTAGCACTGAGTTTTTACACGTGTACATGTACAGGCTTTTGCGTAAGGATGTTACAGTCCCATCATCATTCCACTTCCAAAGTAGGTTATGAAATGCAGATTCTCATGCAGATTTAGTATACTATATACATAGTTGGATTGTACCATAAATCTGTATTGACAGCATGTTGTTCAACAGCTTTTTAATCCATCTAAGAAGAGTTTTTGGTGAAAGATCAGCATGGATTACACTGGGTCCTTCTTTAGAAactaataaaacatgttttattttctgtgggCATCTTTGTTTTAGATGCAAATTCATATTTCTTGTTCTGTATCGAATCTCAACTGATGGCTTCCTTAATATTTCTGTTGAATGTCCCCATGGAGATGTGTGTACCATTGTTCATTTAATTCTCTTGTGTGCGCAATTGCATTTGCACTAAAACTGTATGCTTTAACTATACATCTATACAAGAGTGCTGGCTTTTATTaagaaatattttatattcttagttttttttctgaatgtgtatatttgtgatatgttctctctttccttgattggaatattttttgatagctgtgtatatatattgaatATGAAAAGATTTGTTCTTTGCACCTGATGTCAAGTAACCACTGAAATGTACTTACAATGTTAGAAACATACAGATTTTCACCAAGTGATTTGGATTTGTACAAATTAAATATTACTAAATATTAGTCAGCAAGTCACGTAATGTGCCTTAAACACCCATATGGAGAAGAGACTACTGTATCTTGACAACTTCAAAACCCAAACAAGGTTTCTTGCAGAATATTTTGtgcaaattaatttaaatttcaaaaataCAAGAAAGTTATTTCCTGTGTTCATTCCTTGTGTGTTATTCTGAGATGAATTTTGTTTTGCTCACATGAATATGTGTATATTTTCAATAAAGATTATTTTGATAACTAGAA

Function

GO: NA

KEGG:

id description
K23001 TOR1AIP; torsin-1A-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812147.1 True 2926 mRNA 0.42 8 24646871 24652453
XM_039812148.1 False 2891 mRNA 0.42 8 24646870 24652453
XM_039812149.1 False 2794 mRNA 0.42 7 24646871 24652453

Neighbor

gene id symbol gene type direction distance location
atf6 NA coding upstream 19170 24590326 ~ 24627700 (+)
LOC120566076 NA coding upstream 115282 24524473 ~ 24531588 (+)
LOC120565835 NA coding upstream 122512 24520634 ~ 24524358 (+)
sele NA coding upstream 127330 24515434 ~ 24519540 (+)
scyl3 scyl3 coding upstream 158119 24481703 ~ 24488751 (+)
fyco1a LOC103365712 coding downstream 15929 24668382 ~ 24684071 (+)
ghrhrl ghrhr,LOC102797970 coding downstream 39831 24692284 ~ 24709011 (+)
si:ch211-221n20.8 LOC103365710 coding downstream 58074 24710527 ~ 24722098 (+)
LOC120565988 LOC103367413,LOC108230778 coding downstream 76343 24728796 ~ 24733159 (+)
LOC120564918 NA coding downstream 112994 24765447 ~ 24775660 (+)
G97938 NA non-coding upstream 4785 24638466 ~ 24642085 (+)
G97896 LOC104918463,LOC104952282 non-coding upstream 133837 24511971 ~ 24513033 (+)
LOC120565067 NA non-coding upstream 281695 24309609 ~ 24365175 (+)
G97807 sac3d1 non-coding upstream 390789 24254470 ~ 24256081 (+)
G97789 NA non-coding upstream 433011 24211860 ~ 24213859 (+)
G98014 LOC106904844,LOC106963772,LOC102314236,LOC103463589,LOC106513892,LOC102207185,LOC100706092 non-coding downstream 132343 24784796 ~ 24785342 (+)
G98015 NA non-coding downstream 134878 24787331 ~ 24787540 (+)
G98019 mknk1 non-coding downstream 180984 24833437 ~ 24835517 (+)
G98021 NA non-coding downstream 185160 24837613 ~ 24875666 (+)
G98033 LOC104965512 non-coding downstream 232967 24885420 ~ 24890376 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 438729 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 996357 23631119 ~ 23650513 (+)
G97596 lpl,LOC108280930,LOC105906969 other upstream 1169052 23474782 ~ 23477818 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 1266495 23378731 ~ 23380375 (+)
pole4 NA other upstream 1323386 23321464 ~ 23323484 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 96564 24749017 ~ 24765225 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 129465 24781918 ~ 24783881 (+)
elovl1b LOC106963699,LOC101078639 other downstream 199834 24852287 ~ 24873916 (+)
G98194 NA other downstream 880372 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 1077772 25730225 ~ 25738789 (+)

Expression


Co-expression Network