LOC120565988 (LOC103367413,LOC108230778)


Basic Information

Item Value
gene id LOC120565988
gene name LOC103367413,LOC108230778
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24728796 ~ 24733159 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812165.1
cacggatccatctccccaggaacaaacgctgtgtcggGTTTAATTTTCAGTAACGGCAACACATGGAAGCAGCAGAGGCGTTTTGCATTTTCAACACTATTTTGGATTTGGCAAGAAGTCACTTCAACCCATCATCTTGGATGAATTTGCATATTGTGCAAAAGTCTTCAATAGCTATAAAGAGAAATGGGCAGGCTGGCAATGCTTTTGATGAGGAAAACCTGGTTATATGTGTCATGGATCTGTTTGTGTCCGGCTCTGAGACCATATCCACCACCCTGCGCTGGGCTTTCCTCTACATGGCAAAGTACCCCGAGATTCAAGCAAAGGTCCAGGCTGAGATAGACAGAGTGATTGGACAGTCCAGACAGCCATCCATGGAAGATCGTGCAAACCTGCCCTACACCGATGCTGTTTTACACGAGATCCAGAGGTTTGGCAACATAGTTCCTCTCAGCCTGCCTCGTGTTACCAACAGGGACATCCAGCTGGGAGGCTACACAATCCCAAAGGTGCTGTTTGACAAGAATGAGTGGGAGACGCCCGACACCTTTAATCCAGGACACTTTCTGAACGAGGAGGGCAAGTTTGTGAAGCGAGCTGCTTTCATCCCTTTCTCTACTGGTAAGCGGGCATGTCTGGGGGAGAGCCTTGCCAAGATGCATCTTTTCCTCTTCTTCACCTCCTTTATGCAGCACTTCACCTTCTCCATGCCTGCTGGGGTCAAGCCTGTGATGGACTTTCGCTTTGGCATCACTTTGGCACCACGTGAATATGAAATCTGCGCAACCTCCCGCTTTGAGTAGCTCtaacataaaaaatacatttttttataattttttttttctatcatcACTACTCATGATTATGTCACAGGATGACAGGGTGACAGGGTTTAGTGAAATTCAATTGATTTTTGGCTTTTAGATGACATGTCATGGTCCACTGCCGATATCTTTTTTCAGGCTGCAAACTGTGATGTAGTTAGTTTCTttgtactttttgttttgtttcgtTTCATGGCGTTACCTTTCCCAGTGGGCTCCAAATCCTGGTTGTGACACCTCTGGGGCCTCCTTCTTTAAGGCTAGTTTGGTTTAGCCTGGCTCAATTGTttaatattttaactttttcattTACAAAGGAGACATGAGATACTTTGCCTACTGCTTACCATAAAACATTCTCATAGCATGAACATGGACACATTTAAAGTAAATGCAGAAATGTCATAGTGTCAGAATGGCATAGCAATAAAGCTTCTTGAATTTCTGAATACTAACTGGAATTTAACCTATGTTATTTAAACATTGCTATTGCTTTCTTAGATTAAAGATTACATTTGTG
>XM_039812166.1
ggacgcacggatccatctccccaggaacaaacgctgtgtcggGTTTAATTTTCAGTAACGGCAACACATGGAAGCAGCAGAGGCGTTTTGCATTTTCAACACTATTTTGGATTTGGCAAGAAGTCACTTCAACCCATCATCTTGGATGAATTTGCATATTGTGCAAAAGTCTTCAATAGCTATAAAGgcgtgtgacgttctcgcgatagtacatcgcgttctcgcgataacacgcaacgtggcgaggccacgtgCAAAGGTCCAGGCTGAGATAGACAGAGTGATTGGACAGTCCAGACAGCCATCCATGGAAGATCGTGCAAACCTGCCCTACACCGATGCTGTTTTACACGAGATCCAGAGGTTTGGCAACATAGTTCCTCTCAGCCTGCCTCGTGTTACCAACAGGGACATCCAGCTGGGAGGCTACACAATCCCAAAGGTGCTGTTTGACAAGAATGAGTGGGAGACGCCCGACACCTTTAATCCAGGACACTTTCTGAACGAGGAGGGCAAGTTTGTGAAGCGAGCTGCTTTCATCCCTTTCTCTACTGGTAAGCGGGCATGTCTGGGGGAGAGCCTTGCCAAGATGCATCTTTTCCTCTTCTTCACCTCCTTTATGCAGCACTTCACCTTCTCCATGCCTGCTGGGGTCAAGCCTGTGATGGACTTTCGCTTTGGCATCACTTTGGCACCACGTGAATATGAAATCTGCGCAACCTCCCGCTTTGAGTAGCTCtaacataaaaaatacatttttttataattttttttttctatcatcACTACTCATGATTATGTCACAGGATGACAGGGTGACAGGGTTTAGTGAAATTCAATTGATTTTTGGCTTTTAGATGACATGTCATGGTCCACTGCCGATATCTTTTTTCAGGCTGCAAACTGTGATGTAGTTAGTTTCTttgtactttttgttttgtttcgtTTCATGGCGTTACCTTTCCCAGTGGGCTCCAAATCCTGGTTGTGACACCTCTGGGGCCTCCTTCTTTAAGGCTAGTTTGGTTTAGCCTGGCTCAATTGTttaatattttaactttttcattTACAAAGGAGACATGAGATACTTTGCCTACTGCTTACCATAAAACATTCTCATAGCATGAACATGGACACATTTAAAGTAAATGCAGAAATGTCATAGTGTCAGAATGGCATAGCAATAAAGCTTCTTGAATTTCTGAATACTAACTGGAATTTAACCTATGTTATTTAAACATTGCTATTGCTTTCTTAGATTAAAGATTACATTTGTG

Function

NR:

description
PREDICTED: cytochrome P450 2J6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812165.1 True 1347 mRNA 0.43 6 24728801 24733159
XM_039812166.1 False 1277 mRNA 0.43 6 24728796 24733159

Neighbor

gene id symbol gene type direction distance location
si:ch211-221n20.8 LOC103365710 coding upstream 6698 24710527 ~ 24722098 (+)
ghrhrl ghrhr,LOC102797970 coding upstream 19785 24692284 ~ 24709011 (+)
fyco1a LOC103365712 coding upstream 44725 24668382 ~ 24684071 (+)
LOC120565979 NA coding upstream 76343 24646870 ~ 24652453 (+)
atf6 NA coding upstream 101096 24590326 ~ 24627700 (+)
LOC120564918 NA coding downstream 32288 24765447 ~ 24775660 (+)
slc44a5b slc44a5 coding downstream 214441 24947600 ~ 24988333 (+)
erich3 erich3,LOC107081397 coding downstream 276705 25009864 ~ 25029216 (+)
ssbp3b ssbp3,LOC100703237 coding downstream 336052 25069211 ~ 25083922 (+)
LOC120565286 LOC103358799 coding downstream 363679 25096838 ~ 25178753 (+)
G97938 NA non-coding upstream 86711 24638466 ~ 24642085 (+)
G97896 LOC104918463,LOC104952282 non-coding upstream 215763 24511971 ~ 24513033 (+)
LOC120565067 NA non-coding upstream 363621 24309609 ~ 24365175 (+)
G97807 sac3d1 non-coding upstream 472715 24254470 ~ 24256081 (+)
G97789 NA non-coding upstream 514937 24211860 ~ 24213859 (+)
G98014 LOC106904844,LOC106963772,LOC102314236,LOC103463589,LOC106513892,LOC102207185,LOC100706092 non-coding downstream 51637 24784796 ~ 24785342 (+)
G98015 NA non-coding downstream 54172 24787331 ~ 24787540 (+)
G98019 mknk1 non-coding downstream 100278 24833437 ~ 24835517 (+)
G98021 NA non-coding downstream 104454 24837613 ~ 24875666 (+)
G98033 LOC104965512 non-coding downstream 152261 24885420 ~ 24890376 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 520655 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 1078283 23631119 ~ 23650513 (+)
G97596 lpl,LOC108280930,LOC105906969 other upstream 1250978 23474782 ~ 23477818 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 1348421 23378731 ~ 23380375 (+)
pole4 NA other upstream 1405312 23321464 ~ 23323484 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 15858 24749017 ~ 24765225 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 48759 24781918 ~ 24783881 (+)
elovl1b LOC106963699,LOC101078639 other downstream 119128 24852287 ~ 24873916 (+)
G98194 NA other downstream 799666 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 997066 25730225 ~ 25738789 (+)

Expression


Co-expression Network