ghrhrl (ghrhr,LOC102797970)


Basic Information

Item Value
gene id ghrhrl
gene name ghrhr,LOC102797970
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24692284 ~ 24709011 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812158.1
CCGTCCTGTAGGAGCGTGTTGCAGTCTCATTGAAGAAGCGCCACGTTGGGCTGAACGGAGGAGCCGACAACATGTCCTGTCTCTACATCAGAGGGATCTTTCTTTGTTGGGCTTCAGCTGCTTTGTCGAGCCTGCACCCTGAATGCGAGTACATATTTCAGCTGGAGAAAGAGGAGCGTCACTGCCTTCAGTACATTGCAGAGCAGGGCAACAGAACCACAGAAGGTTGTCGGCCATTCTGGGATGCGGTTGCCTGCTGGCCTCATGCAGAAGTTGGGGAAACAGTCCAAAGAGCTTGTCCTGCCATCTTCTCCCTCTTCAGAAACAACACAGGTGACTATGGATCCCATGGTTCAGTGAGCCGTAACTGCACCAGTGGAGGTTGGTCCAGACATTTCCCACCGTACCACATCGCCTGCAGTGTGGATGATGACATTCCTGAGACAGAGCAGATATACTTTGCCACAGTGAAGCTGATATACACCGTCGGCTACAGCATCTCTCTAGTGGTGCTGGCTGTAGCTGTATTCATCCTGTTGCTCTTCAGGAGGCTGCGTTGTGCCAGGAACTTCATTCACATCCAGCTCTTCATCACATTTATCCTGAAAGCTGTGGCGGTGTTCATAAAGGATGCAACTCTGTTCTCGAGTGACGACACCAACCACTGCACCCTTTCCACATTTGCCTGTAAGGCCTCTGTGGTCTTCTGTCACTACTGTGTGATGTCCAATTTTTTCTGGCTCCTGGTGGAGGCGCTCTACCTCAATTCCCTGCTGCTTTCGTCCTTTAATCACAGCCGTCGGTGCCTCTGGGGCTTCAGCCTGCTGGGATGGGGTGTACCTGTGCTCTTCACTGTCCTGTGGATTGGATCCAGGGTGTATTTTGAGGACACAGAATGTTGGGACATCAACGAGGACTCGCCCTATTGGTGGATCATCAAGGGACCAATTGTTGTGTCTATAGCGGTCAATTTTATACTCTTCATGAACATCATCAGAATCCTGATACAGAAGCTCAATCCTCGGCTGATCCACTTCAATAACTCCTCTCAGTACAGACGCCTGACTAAGtccaccctcctcctcatccctttGTTTGGTACTCACTACATGGTCTTCAATTTTCTGCCTGACTACTTCAATGTTAACCTGCGCCTCTGTATCGAGCTCTGCATGGGATCCttccagGGGCTTCTTGTAGCGATTCTCTATTGCTTTCTTAATCAAGAGGTCCAAAAAGAGGTCCACATGCAGTGGCTGAGGTGGCAGGGCCGAAGCTATGGTGTGGTGTCACCTGCTGCGAAATGCAGCCAGATGGACACACCTTTCTAGGGGTGGCCTTCCCCCTCATCTTACAGGTCTTCTGTTAATTGGACATCGGCTAAGGATTGCTTCTGTGCACGTCATCGTCTCCAATGGGCTGCACAGTACGCCCAATACCAGTGGTTGTCGGCCACATCTGTAAGTTTTCATTCCAAACACGATAATAGACTTTTTACTAGCTGCGCTCCTTTTGCCAGAATTGGAGGAACTAAGGTGAACTTACCAATGGAAAATGATTCTGAAACCTCATGACATTTTACTGACACATTTCAAGACAGATCCTACCAATTTCATATGCATTTCCCTTGTGGCAACAACTTTAGAAAGATCAGCTTCAAGCTTTCCTTGGAGACCTTGCATGTCAAATTAATTAATATGCTCATTTTCTGATTCATTCTGTCTGAAATGTTCTGTTTTAGCGCCTCTGTCTTCAAGCCCACATCACTTTTTTATAATATGGGATGTTAAAGAGTTGAGATGAGATGCTAAAGTAAGTATATTCAAAATTTGATTCCATATATCACAGATGCTATAGCTTAGCATGTTGAACATGTGAAGCTGTAGCCTACTGCCAAGTGACACACAAATTAATCATCATTCATTTAATtctttgtatatttatgtatgggtttgctaatttatttattaattcacagtctgtgtttacagtaagaataaaaataaataccttAATTGCAACTTAATAGATGAATACCTTGAAGTCACACTTTGGCATTAGCTGCTAAAGTGTTGTGGTTTTTTTGAAGTGTAAACCTGCACCTGCACACTGCTGAGAGCCACTTCACTGTATGTatacttgtgtgttgtgttccgTCATGTCATGTGTTCGACTCCACCAATATGAAAGACATCTCCACTGCCATCGGTGATCCAGCAAAGGACGGGAAAACATGAATGGAAACTTTATCATAGTAATAATTCAAAATGATTTGACATCAATATATATGATGCTAACGTATTGTACAGTACTTTGAACTGCATGGTCATATAAAGAAGGATAAAACTGGATTCCCATAATTACCGAATTTGCGTTAGATCTATGTTTGTGAGAAATTTagatttttgtctttgtttgtatTCTCTATGTGTTATAAGGTgataagatttatttttttaatcaagaaaAAAGGTCATGCAAAGTATTGAATCACTACCCAGTTCTGCAGCATCCACAATCCTCTTCATGTAAACAAATGGTTTGCCTAAAACTGAATGTATAAACAAGTCAACTGTCAGACTTGTTTTATAGTCACTTTTCTCTGTTGTTACATTTGGATGTTGCTGCTTTTCTTGTGCCTCTCTCTGTGATGTTTTACTgccttgtgaaaaaaaaaaaatgattcctGCAAGTTCAAGTATTAAATGTTTACTCAGCTTCA
>XM_039812159.1
CCGTCCTGTAGGAGCGTGTTGCAGTCTCATTGAAGAAGCGCCACGTTGGGCTGAACGGAGGAGCCGACAACATGTCCTGTCTCTACATCAGAGGGATCTTTCTTTGTTGGGCTTCAGCTGCTTTGTCGAGCCTGCACCCTGAATGCGAGTACATATTTCAGCTGGAGAAAGAGGAGCGTCACTGCCTTCAGTACATTGCAGAGCAGGGCAACAGAACCACAGAAGGTTGTCGGCCATTCTGGGATGCGGTTGCCTGCTGGCCTCATGCAGAAGTTGGGGAAACAGTCCAAAGAGCTTGTCCTGCCATCTTCTCCCTCTTCAGAAACAACACAGGTTCAGTGAGCCGTAACTGCACCAGTGGAGGTTGGTCCAGACATTTCCCACCGTACCACATCGCCTGCAGTGTGGATGATGACATTCCTGAGACAGAGCAGATATACTTTGCCACAGTGAAGCTGATATACACCGTCGGCTACAGCATCTCTCTAGTGGTGCTGGCTGTAGCTGTATTCATCCTGTTGCTCTTCAGGAGGCTGCGTTGTGCCAGGAACTTCATTCACATCCAGCTCTTCATCACATTTATCCTGAAAGCTGTGGCGGTGTTCATAAAGGATGCAACTCTGTTCTCGAGTGACGACACCAACCACTGCACCCTTTCCACATTTGCCTGTAAGGCCTCTGTGGTCTTCTGTCACTACTGTGTGATGTCCAATTTTTTCTGGCTCCTGGTGGAGGCGCTCTACCTCAATTCCCTGCTGCTTTCGTCCTTTAATCACAGCCGTCGGTGCCTCTGGGGCTTCAGCCTGCTGGGATGGGGTGTACCTGTGCTCTTCACTGTCCTGTGGATTGGATCCAGGGTGTATTTTGAGGACACAGAATGTTGGGACATCAACGAGGACTCGCCCTATTGGTGGATCATCAAGGGACCAATTGTTGTGTCTATAGCGGTCAATTTTATACTCTTCATGAACATCATCAGAATCCTGATACAGAAGCTCAATCCTCGGCTGATCCACTTCAATAACTCCTCTCAGTACAGACGCCTGACTAAGtccaccctcctcctcatccctttGTTTGGTACTCACTACATGGTCTTCAATTTTCTGCCTGACTACTTCAATGTTAACCTGCGCCTCTGTATCGAGCTCTGCATGGGATCCttccagGGGCTTCTTGTAGCGATTCTCTATTGCTTTCTTAATCAAGAGGTCCAAAAAGAGGTCCACATGCAGTGGCTGAGGTGGCAGGGCCGAAGCTATGGTGTGGTGTCACCTGCTGCGAAATGCAGCCAGATGGACACACCTTTCTAGGGGTGGCCTTCCCCCTCATCTTACAGGTCTTCTGTTAATTGGACATCGGCTAAGGATTGCTTCTGTGCACGTCATCGTCTCCAATGGGCTGCACAGTACGCCCAATACCAGTGGTTGTCGGCCACATCTGTAAGTTTTCATTCCAAACACGATAATAGACTTTTTACTAGCTGCGCTCCTTTTGCCAGAATTGGAGGAACTAAGGTGAACTTACCAATGGAAAATGATTCTGAAACCTCATGACATTTTACTGACACATTTCAAGACAGATCCTACCAATTTCATATGCATTTCCCTTGTGGCAACAACTTTAGAAAGATCAGCTTCAAGCTTTCCTTGGAGACCTTGCATGTCAAATTAATTAATATGCTCATTTTCTGATTCATTCTGTCTGAAATGTTCTGTTTTAGCGCCTCTGTCTTCAAGCCCACATCACTTTTTTATAATATGGGATGTTAAAGAGTTGAGATGAGATGCTAAAGTAAGTATATTCAAAATTTGATTCCATATATCACAGATGCTATAGCTTAGCATGTTGAACATGTGAAGCTGTAGCCTACTGCCAAGTGACACACAAATTAATCATCATTCATTTAATtctttgtatatttatgtatgggtttgctaatttatttattaattcacagtctgtgtttacagtaagaataaaaataaataccttAATTGCAACTTAATAGATGAATACCTTGAAGTCACACTTTGGCATTAGCTGCTAAAGTGTTGTGGTTTTTTTGAAGTGTAAACCTGCACCTGCACACTGCTGAGAGCCACTTCACTGTATGTatacttgtgtgttgtgttccgTCATGTCATGTGTTCGACTCCACCAATATGAAAGACATCTCCACTGCCATCGGTGATCCAGCAAAGGACGGGAAAACATGAATGGAAACTTTATCATAGTAATAATTCAAAATGATTTGACATCAATATATATGATGCTAACGTATTGTACAGTACTTTGAACTGCATGGTCATATAAAGAAGGATAAAACTGGATTCCCATAATTACCGAATTTGCGTTAGATCTATGTTTGTGAGAAATTTagatttttgtctttgtttgtatTCTCTATGTGTTATAAGGTgataagatttatttttttaatcaagaaaAAAGGTCATGCAAAGTATTGAATCACTACCCAGTTCTGCAGCATCCACAATCCTCTTCATGTAAACAAATGGTTTGCCTAAAACTGAATGTATAAACAAGTCAACTGTCAGACTTGTTTTATAGTCACTTTTCTCTGTTGTTACATTTGGATGTTGCTGCTTTTCTTGTGCCTCTCTCTGTGATGTTTTACTgccttgtgaaaaaaaaaaaatgattcctGCAAGTTCAAGTATTAAATGTTTACTCAGCTTCA

Function

symbol description
ghrhr Enables growth factor binding activity; growth hormone-releasing hormone receptor activity; and peptide hormone binding activity. Involved in several processes, including cAMP-mediated signaling; response to estrogen; and response to insulin. Located in several cellular components, including nuclear matrix; nuclear membrane; and secretory granule. Is integral component of membrane. Implicated in isolated growth hormone deficiency.

NR:

description
PREDICTED: growth hormone-releasing hormone receptor isoform X1

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004999 vasoactive intestinal polypeptide receptor activity molecular_function

KEGG:

id description
K04584 GHRHR; growth hormone releasing hormone receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812158.1 True 2722 mRNA 0.43 13 24692284 24709011
XM_039812159.1 False 2704 mRNA 0.43 13 24692284 24709011

Neighbor

gene id symbol gene type direction distance location
fyco1a LOC103365712 coding upstream 8213 24668382 ~ 24684071 (+)
LOC120565979 NA coding upstream 39831 24646870 ~ 24652453 (+)
atf6 NA coding upstream 64584 24590326 ~ 24627700 (+)
LOC120566076 NA coding upstream 160696 24524473 ~ 24531588 (+)
LOC120565835 NA coding upstream 167926 24520634 ~ 24524358 (+)
si:ch211-221n20.8 LOC103365710 coding downstream 1516 24710527 ~ 24722098 (+)
LOC120565988 LOC103367413,LOC108230778 coding downstream 19785 24728796 ~ 24733159 (+)
LOC120564918 NA coding downstream 56436 24765447 ~ 24775660 (+)
slc44a5b slc44a5 coding downstream 238589 24947600 ~ 24988333 (+)
erich3 erich3,LOC107081397 coding downstream 300853 25009864 ~ 25029216 (+)
G97938 NA non-coding upstream 50199 24638466 ~ 24642085 (+)
G97896 LOC104918463,LOC104952282 non-coding upstream 179251 24511971 ~ 24513033 (+)
LOC120565067 NA non-coding upstream 327109 24309609 ~ 24365175 (+)
G97807 sac3d1 non-coding upstream 436203 24254470 ~ 24256081 (+)
G97789 NA non-coding upstream 478425 24211860 ~ 24213859 (+)
G98014 LOC106904844,LOC106963772,LOC102314236,LOC103463589,LOC106513892,LOC102207185,LOC100706092 non-coding downstream 75785 24784796 ~ 24785342 (+)
G98015 NA non-coding downstream 78320 24787331 ~ 24787540 (+)
G98019 mknk1 non-coding downstream 124426 24833437 ~ 24835517 (+)
G98021 NA non-coding downstream 128602 24837613 ~ 24875666 (+)
G98033 LOC104965512 non-coding downstream 176409 24885420 ~ 24890376 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 484143 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 1041771 23631119 ~ 23650513 (+)
G97596 lpl,LOC108280930,LOC105906969 other upstream 1214466 23474782 ~ 23477818 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 1311909 23378731 ~ 23380375 (+)
pole4 NA other upstream 1368800 23321464 ~ 23323484 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 40006 24749017 ~ 24765225 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 72907 24781918 ~ 24783881 (+)
elovl1b LOC106963699,LOC101078639 other downstream 143276 24852287 ~ 24873916 (+)
G98194 NA other downstream 823814 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 1021214 25730225 ~ 25738789 (+)

Expression


Co-expression Network