G98302 (tmem59l)


Basic Information

Item Value
gene id G98302
gene name tmem59l
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 25769696 ~ 25771664 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU132631
GGAGTAGAGACGACAGCCGCGGTGACAGGCGTTCATTATGGAGTCTTTAGCAGGGCTTTTGTTTTTGATGGTGAGCTGGCATTGTTTTTTGCAGTAATTGATGTCGCCCAGTTGGTTGTCAAACAGATCCGAAGACGCCGCAGCGAGCCCGGCAAGAAGCAACGAGAGTAGGGCCGAGAAGCCGCACATCTTTTCGCCGAGCCGGAGCATCTGAAACCCTGGAGAAGAGGAGCGGAGAGTCGAGCGTCAACCAGCACTGAGCTCCCTTTGTGGCGGCGCTGCTGCTGGTGCGGATGCTGCTGATGATGCTGCCTCAGCCCGGGTCCTGTCTGCTCCGCTGGTCTGCCTCTGCTCGTGGCGTCACgcgcatcatcatcatcatcatcatcacgcACAAGCTGGCccccctaaacacacacacacacaacctgccTTCACTGCAGTGCACAAAGTGGCAGTGATGacattcataaaaaaacaaaaaatgttagtTGAAAAGGGCCAAGCTGCATATGCCCTGCACAGAGCAGACAAATGGTGCCTTTGTTAAAGTATTGACAGTTCATGCATAATCAACGTAGGCCTATCCGTTGAATGGAAAGATCCTGCTGGGACATGTGGGCGACAACACATATCAGCTGAGGAGAGATTGCCTG

Function

symbol description
tmem59l Acts upstream of or within axon extension. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Is expressed in nervous system; neural tube; and trigeminal placode. Orthologous to human TMEM59L (transmembrane protein 59 like).

NR:

description
PREDICTED: transmembrane protein 59-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132631 True 656 lncRNA 0.53 2 25769696 25771664

Neighbor

gene id symbol gene type direction distance location
crlf1b LOC104948968,LOC103376638,LOC103354212 coding downstream 898 25755658 ~ 25768798 (-)
edem3 edem3 coding downstream 168489 25587650 ~ 25601207 (-)
zgc:92140 LOC103354221,LOC104918428,LOC106931148,LOC103463620,LOC103142534 coding downstream 183027 25558109 ~ 25586669 (-)
colgalt2 LOC104918429,LOC100697625,LOC101469839,LOC102788431 coding downstream 222668 25522906 ~ 25547028 (-)
rgl1 rgl1,LOC102787953 coding downstream 254078 25489012 ~ 25515618 (-)
peak3 NA coding upstream 269148 26040812 ~ 26044235 (-)
LOC120565813 NA coding upstream 374577 26146241 ~ 26156917 (-)
onecut3a LOC104920849,LOC103354199,LOC105938949,LOC106515027,LOC107393292,LOC107089723,LOC103463645 coding upstream 422494 26194158 ~ 26215407 (-)
foxq2 LOC104953155,LOC102303059 coding upstream 465630 26237294 ~ 26239508 (-)
hmg20b hmg20b coding upstream 657865 26429529 ~ 26437014 (-)
G98293 NA non-coding downstream 29046 25738499 ~ 25740650 (-)
G98292 NA non-coding downstream 31539 25737918 ~ 25738157 (-)
G98291 NA non-coding downstream 32745 25736555 ~ 25736951 (-)
G98261 NA non-coding downstream 98406 25671030 ~ 25671290 (-)
G98241 NA non-coding downstream 156064 25561364 ~ 25613632 (-)
G98364 NA non-coding upstream 263066 26034730 ~ 26039868 (-)
G98370 NA non-coding upstream 279774 26051438 ~ 26052290 (-)
G98420 NA non-coding upstream 495920 26267584 ~ 26269429 (-)
G98451 LOC101063908,LOC103354193 non-coding upstream 573312 26344976 ~ 26346413 (-)
G98528 NA non-coding upstream 1020982 26792646 ~ 26793497 (-)
fam78bb fam78b,LOC107393274,LOC105927868,LOC107089706 other downstream 22665 25740719 ~ 25747031 (-)
zfyve9b NA other downstream 884455 24865781 ~ 24885241 (-)
G98005 LOC103373964,LOC107081966 other downstream 1013729 24749001 ~ 24755967 (-)
shc2 shc2,LOC101463941,LOC100696779 other downstream 1567158 24182931 ~ 24202538 (-)
tax1bp3 tax1bp3 other downstream 2409809 23353234 ~ 23359887 (-)
LOC120565253 NA other upstream 258929 26030593 ~ 26033391 (-)
G98429 NA other upstream 524283 26295947 ~ 26298495 (-)
unc13a unc13a other upstream 608346 26380010 ~ 26426941 (-)
G98612 atp5d other upstream 1318570 27090234 ~ 27091598 (-)
cilp2 cilp2 other upstream 1605047 27376711 ~ 27396386 (-)

Expression


Co-expression Network