LOC120566080 (LOC103369405)


Basic Information

Item Value
gene id LOC120566080
gene name LOC103369405
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 29471572 ~ 29573160 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU133915
TGGATATATTTTTCCAATCAAAGcatcatttctattttattCAAATTAGTTGAACTACTGTACGATATTTCCACGTACCCCCTGGCAACTGCAGAAGTACCTCCTGGGTTGAGAGCCactgctctagtgagtatttgggGCAGCAGGACAGTGTATGAGGGGTTGAGTCACACCCCCCAGGAAAAATAAAGagttttgaattgaattgaaacatAAGAGATCAAACCACATCATCTACACCATTCGGTAAATGTTCATGTCCCCCAGTTTGTACCACAGGCTTTATGTTATTAGTTTGTAGTCTACAGGGCCAAACAGAGACCACTCTGATGACATCATctaaataaccctgatgacataaTCTGGGTTATGTGCTCCCCcagaggacattatacaactgttGTAACTTGAATGCATGTTTGCTataaatgtactgtaaatga
>XM_039812324.1
TCCTAACTtcctcaaaaacaaaaacacagagcgATCAGCTGACAGTGAGTGCAGTAGTAGAAAGTTCTGATATACAGTAGTACATTTTAGATATTGACATGTTGCTTTGTCTCTTAATGTCCTTATAACCACAGCGAGAGAAAACTGAGGAAAGTTAACAGGAAGTGGCATCTGGAAGTGCTCAGAAGTGAGTGGAAGAAGTCGTCTcccagcaacaacaaaaaagtgaaatatgGGCAGTGAGTACCAACCACTGACTTCAGCAGAGTCATGCAGAAAATTATTCATAGAGACATCAGAGTGCTTTATATGCAGGGATGTTGAACTTCAAGCCAGTGACCCACTGAGGAATTTCTGTAACTGCAAGAATTTACTTGCCCATCACGTGTGCCTGTCCACGTGGATCCAGAAGGGATTTGGGAGTGAAGACAGGCTGCGCTGCATTATCTGCAAAACCAAGTACCAGCTCCAGAGGAGTTCTCCATGGCGGTCGCTGAGCTTCCAGTGGCAAACGTGGCTAGCGGTGATCGCTGCGTGTGTTCTGCTGGCTCTGGTACCTTATGTTGTTTACTGCATGATGACCACCTTCaccaaccctcctcctcccaacACCTTTAAAGTGGCAGCAGTCTCTTTTGGTCTGCTGACAGAGATCCTCCTAATCAAGTGTCTGTCCAGCTACATCTGCAGTCGTTACCGGCAGGCTGAGCAGAGCTCCTTCACAGTCCGGCCCAGAGGCTTTGACGGGGACAGAACGAGTCCGGGCCGCTGGGATCAGTCTGCAGCCCCGGCGGCAGCAGGCCACGCTTCATCGACGGCCTCACCCAGTCAAGTGGATGCAAGGAAAGGGGATATGTTGAAGAGTGAATGTCTCAGCTTTTTCTGAACCACTAACATAATGAGTTTACAGAATACAGGGTCATAGTAAATCCTATGGGTATTAGCCGTTCAAGATATCGCAGCAGTTTATCAGCGTGGCATTAATGAGATCTTACACTTTAAACCCTGTTCCCGAGGTTTCAAATATTCTGGTGTCAAACCCTTACACTCTTTATTCAGTGGGTATATTCTCACATATTGCAAATTGATCATAAGGAAGCTAATGCACGCAGCTTGCATGTTCAGGCTccgggagagaaaaaaaaagcctggaATCACTCTCTTTCCTTAATGAtgtccacacagagacaatgGGGCGCCGCTCTGATTAGTGTCACCTGTCCTTGTGCATCTCATCAGCTCCATTATGGCTCCATTTCCCATGCTTCTTCTGCTAATTGAATACCCTGTGAAGTGGTGACGAGGATGGGGGCGAGAGCAACGTCTGTTCCGCTGCTGCTTCAGAAATGAGAGTGAAGCTTCCCAGTGAGACACCACTGTGGTTCTTAAAACATAAAACCATTATCATACAGATGGAAAAAGTGCCCTGATGCTATATTTCCTTCATATCGTCTACGGATTTATATATAACAGCTTTCAATTAGCTATAACTAATATCTGTCCGTTAAATATACTGtaaggctacagccagcagctggttagcttagcttagctgaAGTCACctgtcgtttttttgttttatgtggaTCAACGTATATTCACCTGCAGTGACTGGCTTTTTGCAGTGTTGACAGGGAATTCTCAGAGAAAAATAAGATTGAAGTTAAACAGGTAGCACGAGACAAGCATGAGTAGGCTTAAATTCACTAATGGGGGTGGCCTGAAAGACGGAAGAATGCTCTGTCAGTAACAGTCACTCCTTTTCTAATGAGCtaaatgtttattacagtaGTTATGACTGTGTGGTGccggtgtgtgactgagtgaaGCCAAAAAAAAGGCCACTGGCCCGGATGGACTACATGTCCTTAAAGACCCAATTAAAAGGAGTCTTTACAAGGTCCTTCCTGTACTATTCCAGTATTTGTTAAACACATGTACAGTGCAAAACTATCAATCATTAAGTTTGTTCCCAAAAAAGCCAATGTGTGTATGGTGAATGACCATACACGCCATCAGTTCCGTGCTAGTCATCTAACTTCCTCTGTGGTACAGATGCCGCACTGCTATGTTAAATATCACTAGGCtatgttttatttgattttgttcaGCTTTTTAACTCTGAACTATGAAGACACGTCTTTTTACAAAGACTCACTGATCTTGGGGTCAATAGTGACTTCTTTCTGACGGACCACGGAGAGTCTCCGTCGGTGGAACAATGTCTGACTTGCTAACTGTTGGTACAGGTGCTCCTGAAGGATGTGTTCTTTCTCCTGTACTGTTCTCCCTGTTGACAAATGAATTGAAGATGACAtagctttaattagggcccgaccCCAAACGTGCCAGAGAACCATGAAATTTGGTGGGAGcattgtaaaatattttttccccTCCTAACAGGAAGTCAGCCATGTTGTATTTTGTGCgttgattttcatttcaagaacacatgtttgaggactttaggagtcacaaaaacacacccaTGTTCAATCTCTGGGTCAGTCTGGTGTACAATAGAGGTTTCACGGAATCGTCGACTATTTGAATATTCGACCATCAAAACTACTAATCGATGCGGCGCATTATTGTCAGATATTCGTTCATCTCTGGTTTTAACATGGTGCAGTAATGAAGTAGTGGCAAGTAATGGCAGATACATTATGCATGTAATTACATCAGATATGCAGAAGTGGCGGTGTGGGTTAACAAGTCATAGTTGGTGCAAGGCGGTAAACTTGTGTAAAGGTCTCGCACGAAAGTTTGTGCGAGAGTTCAACTAAGTGTTTCTATTGGCAGCAGCCTTGCAGTGACTGTTATATCGTTGCTCGAACAGCAGTGGATAACAACAAATTATGTGAAAGCTTCCgttttgtgtataaatatgaaGTTGTCACTTATATGGCGATATCCGAATCTGCGTTCCAACGCTGTGACAAACGTCTGAATGAAGCATTAAGTTGTTAACTTTTACTCATTTAGCGGCtggcttgctaattccaccatgctggttacagaaaatgatCCAAACAGCAGGCTGGTGGCCAGTGGCAGCGCTGGATCTAACAGTCTCTCCGGCGCTACAAGACTACTTCaacaggaggagatcagagatACCTTTCGCTCTTCTCCCGGGGTAGTCGGCCAGCAGCGGGGGGCACCACGGGgtgcgctagctagctaattcttGTCTAATTTGTGGTCTCCTTAACAGTAAATCCCTCTGATTACAACAAGAACGTGGCATCATATTTACACAAGACGGATCCTTACAACCCATTAGACAATTTTTTAATGCTATCCAAGAGTGCAAAATGAGGATAATAAATGGCCTGTAGCGAGATTGCATATATATTTGACTATTTGTCGACTTTTGGGGAGTTGTTGATGACTACTACTATCTATTTTTTTGAGctgttgtttttctcatttgtACTTTCACACTGAACGCGAATATTACGCGGCGATAAAGCAACGTAATTCTTTTTCGAAACAACACACCGCAAATAAAGACATCAACCAATCATGTTGTGTTGTTTACTTATGAGGATTGACGAGACACATTTTCCATAAAAGCCCTAAACATATAACCTACACTGCATACTGTTTACCAGAGGGaattaaattcactcagagTTATTTGCTCAAAAGCAGGTTTAGCTTTTCCTGCTTTGGCATCCCGACCATGGTTGGACAGCACAGTGGGAGACAGGGCTAACGTTAACCCCTGTCACTCTACTCAGCACCCGGAGAAACAAGACATGGTTTTGATGAGCTGCCGCATTTCTTTGTGCTCAAACTGCAGACTCTAGCTACTGTCCATTCATTTGATATTTTTACCGTAAAACGTTATCTCCACTGCTCTGATCACCCTCTCTCGTCTGCTCACACCGCATCTCCCGTCACTTTCTCTCTCGCTTCCAAGAAGGAACTTAAACTGTTCCACTGACATGGTAGATAAGCTGGGGCAAATACTCGAAACGTTTATTGAAAACTGTCGCAAATTTGCATCGCTGCTGGTATGAATAGCTTTAATGCAAAATATTTACAGCCCAATTGTCATTTCTCTGTTGTTTATTCGTCACGCCCCCGGTATGTAACGGCCTTAAAtcgtttttctttctttgggcCTATTTTCAGTtttggattaatacacatttggtgctctagtgcaatggttcccaacctttttggtctgaggtaccacacagccctgtcagatgaaATTGCCTAACCCGTCATCGATTCCCAATGTATGTACCAAATGTATAACACTATTCATTGTATAAAAGTgaatattgttaattttttatacAATTGAAATGTCAtaaggttggtttggtcagcaatcATACTAATACAAGGCTACCACTACTTGGAGTGAAGCTGAATGTTTCAACAATATAtgtattacttttagctaactatttcaaccgttagctaactatttaaatttttagCTTACTATTTCAAcctttagctaactattttaacTTTTAGCTAACTGTTTCTTCATAATCATTCAAACTGTTTTTAATTCTAGCTAGTTATTTCTaacatttattcattacttttaggTAAACTTCAGGGCTGCAACATgtagtgttcaggtgttacagtTGACTTCATGTTAATATGTGGATATATTTTTCCAATCAAAGcatcatttctattttattCAAATTAGTTGAACTACTGTACGATATTTCCACGTACCCCCTGGCAACTGCAGAAGTACCTCCTGGGTTGAGAGCCactgctctagtgagtatttgggGCAGCAGGACAGTGTATGAGGGGTTGAGTCACACCCCCCAGGAAAAATAAAGagttttgaattgaattgaaacatAAGAGATCAAACCACATCATCTACACCATTCGGTAAATGTTCATGTCCCCCAGTTTGTACCACAGGCTTTATGTTATTAGTTTGTAGTCTACAGGGCCAAACAGAGACCACTCTGATGACATCATctaaataaccctgatgacataaTCTGGGTTATGTGCTCCCCcagaggacattatacaactgttGTAACTTGAATGCATGTTTGCTataaatgtactgtaaatgaTTACTCCTTTATAAATGTAGGAAATATGAAATAATGATGTTAAATAACTGAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC103369405

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133915 False 443 lncRNA 0.40 1 29471624 29472066
XM_039812324.1 True 5139 mRNA 0.42 5 29471572 29573160

Neighbor

gene id symbol gene type direction distance location
farp2 farp2 coding downstream 432043 29001524 ~ 29039529 (-)
boka bok,LOC103374845 coding downstream 479981 28979773 ~ 28991591 (-)
angptl1a angptl1 coding downstream 617985 28836582 ~ 28853587 (-)
zyg11 zyg11b coding downstream 699239 28755051 ~ 28772333 (-)
LOC120564929 NA coding downstream 739407 28725253 ~ 28732165 (-)
LOC120564876 NA coding upstream 123430 29696590 ~ 29703769 (-)
LOC120565715 kyat3,LOC102191994,LOC100694678,LOC102313413 coding upstream 133520 29706680 ~ 29730876 (-)
barhl2 barhl2,LOC102777546 coding upstream 395965 29969125 ~ 29972945 (-)
LOC120565063 LOC104921729,LOC102790944,LOC101466253,LOC104946874 coding upstream 740642 30313802 ~ 30322363 (-)
gfi1ab gfi1 coding upstream 763507 30336667 ~ 30343004 (-)
G99275 lmo4,LOC103026253,LOC107593176 non-coding downstream 38658 29430220 ~ 29432914 (-)
LOC120566009 NA non-coding downstream 207105 29257820 ~ 29264467 (-)
G99241 NA non-coding downstream 280672 29190142 ~ 29190900 (-)
G99240 NA non-coding downstream 281483 29189814 ~ 29190089 (-)
G99239 NA non-coding downstream 314476 29156627 ~ 29157096 (-)
G99293 NA non-coding upstream 20029 29593189 ~ 29593437 (-)
G99294 NA non-coding upstream 27977 29601137 ~ 29601365 (-)
LOC120565743 NA non-coding upstream 79108 29652268 ~ 29654527 (-)
G99314 NA non-coding upstream 153441 29726601 ~ 29728741 (-)
G99315 NA non-coding upstream 157850 29731010 ~ 29731352 (-)
atg4b atg4b,atg4a other downstream 493128 28966406 ~ 28978444 (-)
LOC120565123 ipo13,LOC103354180,LOC102296374,LOC100704490,LOC101476741,LOC104925999,LOC102781747,LOC102197282 other downstream 834493 28601332 ~ 28637079 (-)
G98938 serbp1,LOC102303841,LOC104930792,LOC105932454,LOC103463733,LOC106917776 other downstream 1201847 28199362 ~ 28269725 (-)
G98781 NA other downstream 1643265 27825065 ~ 27828307 (-)
G98777 NA other downstream 1741015 27729681 ~ 27730557 (-)
G99324 lrrc8c other upstream 180065 29753225 ~ 29758214 (-)
znf644b LOC102209721 other upstream 466763 30039923 ~ 30078079 (-)
tgfbr3 tgfbr3 other upstream 533609 30106769 ~ 30191850 (-)
G99587 NA other upstream 1311115 30884275 ~ 30885171 (-)
c9h19orf44 NA other upstream 1373049 30946209 ~ 31011684 (-)

Expression


Co-expression Network