LOC120565748


Basic Information

Item Value
gene id LOC120565748
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 6067683 ~ 6071247 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811753.1
ATTTATGGTGCCGCTCCCACAGCAGCATCGTACATAGTGTGAAGAGCAGAAACCAGGAACTCATATTCAGCAAACTACAGGTAACAGTGGGATGATGAGTGCTGCTCAGACCCAAGCAACACTGGAGTCCAAACTGGAGGCCCTGCAGTGCCACTTCACTTGGAATCTGGACCAAAGCACGACTAAACTTTTCCGTCTCAGGGACCAGCTGAAGGACATTGGCACAGAGGAGGGATACAGCTGGCTGGGTCACATTTACAACCTGCAGGGGTTCATTCACTACCAGCTGGGGTTCACCGATGATGCCCTGCGTTTCTTCAGCAGGGCAGCAGAGGCCTTCCGCCAGATGAGAAACACTGTCTCAGACGAGGGCCCCTGGTTGGTGGTGAACCACAGGAACCTGGCGTGGCTGCACCACCATCTGGGAGACCGAGCAGAGAGTCAGGCTTACCTGTCAAAGGCCGACGACTTGACAAATGAATACCCATCTCCATCCCAGGACCAGCTCCATCCAGAGATCTACGCTGAAAAAGCCTGGACCCTGATGAAGTTTGGCGCAGAAGAAAAGCTTCTGGCTGCAGATTACTTCCAGAGAGCCATCAGGATGCAGCCGGACACGGTGGAGTGGCACAGCAGCCACGTCATAGGGTTAGTGAATGCTTTTAAGCATAGCAACAAAAAGCTGGGGGCTGACATcttggagaaaatgaaaatcgcCAAGGAACACGATCCAGAGAACTTGTATCTCGCTGCTCTGTACCTTGAGGCATGTGCTACGAAAGGAAAGCAAATTGAAAGTGAAGCGCGTGAGTTGGCCAGCAGGGTTTTAAGGAAGCCCATTAGCAGCTACAGTGGTATCAAACCATTACTAAGGCTGTACACAATGTATGTATCTCCTGATGAGGCCATTGATTTGGCTGAGGAGGTTCTGGAAAGACATCCAGATGAACGATATCTGAAGAGATGTGCTGCAGTCTGCTACAAAAAGAGGATCTTTTTACACCGGGACAATCCCCTGGAGCACAGCCTGATCGACAGAGCTATCAGTCTCTATGAGGAAGTGATTCCTCTTTACCCTCGTTCTTCACTTAAGAGAAAAATATCTCTTGCAAACATATACGCAGAGTCGAAACACCGAGCTAAAGCTGACCAGATATACGAGGAATTGCTGGAGAGTGATCTGGATGCTGAAGGGGCACAGATGCTTTACAACTACTATGCAAAATATGTACACTTCATCCGAAAAGAGAGCTACAAGTCGATAGAATATCACATGATGGCAGCGGCGGTACCGCAACAATCATACTATCGTAAAAACAGCATCAGAACTCTAGAGAGGATcagagaaagaaacagaaacCGAATGTGTGGAGAAATAGATGAGTTTCTGAATAACATGCAAGACTAATGCAGCTTTACCAATGCATGGTACGGCTCGACTCGCtcgttttttggttttccatttgcAAAAGTTTTAGATAGTAGCCTTCCTGGTACTTATTTGGTACCACCTTGgttgaggttccaagcgagctgagccaATACTAGAAGAGTTGGAGTTTAAACACTGCAGACCattgattggtcagagagaatcgtcactagcGCAACACGGTATATCCTGCACAAACCCACCTTTTCCAAGCTATCGTCAATAGCGACCGCAATTGTTTGATTCACCTCGCTCAGCTTTTACAAAGTGGCAGCCTAAAACATTATGCTGTACAATACACTACTAGGATACCCATGCCTCATTTTGATGCCACTTAAACGCCTGTGCTGCTCTATAGACCAGTGCTCTGAAATGGACGTTACAAGAAACAGAAGCTGCATCTGtaactagttaacactacatgtggcagcaggtaacattagcctactgttagctagtagctagctaaaacactattaaaatgctgacagctcaACGGTCTAACATGCTGTTTTTCAATGAAAAGAATGCAAAGGGTTCAACAgactgcagctaaagacacagaggagactagCTGCACTGTGGCCACTGCTGCtgacaacacagacgggacttAATGGTGCGTTCAATTGCAAATCTTAAGCTCattgtgcattcaaagttaCTTTTTCTATCTAGTGGTTCttcttttcatcatttcaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811753.1 True 2135 mRNA 0.47 2 6067683 6071247

Neighbor

gene id symbol gene type direction distance location
LOC120565642 tspan1,LOC104930558 coding upstream 38490 6002811 ~ 6029193 (+)
mast2 mast2,LOC102294889,LOC102799744 coding upstream 580798 5211170 ~ 5486885 (+)
LOC120566192 NA coding upstream 865808 5024510 ~ 5201875 (+)
prrx1b prrx1 coding upstream 1067243 4966559 ~ 5000440 (+)
gorab gorab coding upstream 1121376 4934761 ~ 4946307 (+)
tut4 zcchc11 coding downstream 190973 6262220 ~ 6290119 (+)
LOC120565762 LOC102311032 coding downstream 264504 6335751 ~ 6345081 (+)
cyldl NA coding downstream 556395 6627642 ~ 6641120 (+)
ghrhrb LOC100710271,LOC101475240,LOC103357300 coding downstream 600824 6672071 ~ 6723277 (+)
si:ch211-191a24.4 LOC104966872 coding downstream 894300 6965547 ~ 6971300 (+)
G93609 NA non-coding upstream 102624 5964812 ~ 5965059 (+)
G93541 NA non-coding upstream 406878 5596770 ~ 5660805 (+)
G93437 NA non-coding upstream 575226 5488294 ~ 5492457 (+)
G93441 NA non-coding upstream 656325 5400131 ~ 5411358 (+)
G93640 NA non-coding downstream 143821 6215068 ~ 6215735 (+)
G93644 NA non-coding downstream 169948 6241195 ~ 6242158 (+)
G93700 atpaf1,LOC102780159 non-coding downstream 318909 6390156 ~ 6398997 (+)
G93713 NA non-coding downstream 517956 6589203 ~ 6589653 (+)
G93758 NA non-coding downstream 765344 6836591 ~ 6836818 (+)
G93613 NA other upstream 16163 6035369 ~ 6051520 (+)
trmt1l trmt1l other upstream 1354450 4685224 ~ 4713233 (+)
LOC120565391 NA other upstream 1754168 4284755 ~ 4313515 (+)
G93150 NA other upstream 1849857 4174602 ~ 4217826 (+)
frem1b LOC100693369,LOC101486624,LOC102206675,LOC102294239 other upstream 2243901 3714919 ~ 3823782 (+)
G93638 NA other downstream 130838 6202085 ~ 6214017 (+)
rhpn1 rhpn1 other downstream 283645 6354892 ~ 6381598 (+)
G93938 NA other downstream 1278563 7349810 ~ 7350587 (+)
LOC120565294 pycrl other downstream 1807672 7878919 ~ 7890177 (+)
LOC120565614 NA other downstream 1824898 7896145 ~ 7905247 (+)

Expression


Co-expression Network