pmt (LOC106930518,LOC102210468)


Basic Information

Item Value
gene id pmt
gene name LOC106930518,LOC102210468
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22650018 ~ 22660250 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814405.1
GTTCTGTTATTTAAAGAGCACCATACACGCTGAAACCTGCACTCTGTCAGAGAGGCGTTACTCATAGTAGCCCTCTTTTGTTAATTGCCAGACTACATTGGAAGTGTAGAATAATTTTGCAATAAGTTCAAATCCACCAAAGACCACCATGGAAAAAGCTCGTAGCAACATGACAGAGTTTTGGAAAGAGCACTCCAAGGCCGCCACAGTGGAGGAGATGATGCTGGACTCTCGTGCCAGGGAGCTGACCCAACATGAGCTGCCCGAGATCCTGTCCGTACTGCCCAGCCTGGCTGGATCCAGAGTGCTGGAACTGGGAGCTGGCATCGGTCGTTTCACCAGCCACCTGCTGACCAAGGCTGGCCATGTGACTGCTGTGGACTTCATGGAAAGCTTTGTGGAGAGGAACAGGCAGGACAATGGTCACCATAGCAACGCTACCTTCATCCAAGCTGACGTAACAAAGCTGGATATCCCCCAAAACAGCATTGATTTTGTCTTTTCCAACTGGCTGCTGATGTACCTGAGCGACACAGAGCTAAAGTCGTTTATAGAGAAGACACTGAGCTGGCTGCGGCCCGGTGGCTTCTTTTTCTTCAGAGAGTCCTGCAACCACCGGTCAGGTGACTCCAAGAGGGACTTTAACCCCACTTGCTACCGCACTGAGGCACAATACAGCCACCTGGTATCATCACTACAAGTGGAGGTGCCAGAGGGGGGCCAAAAGTTTGGTTTCGACATTGTGTTGAAAAAGAAAGTTCAGGCCTATGTTGAGATGAAaaataatcagaatcagatcTGCTGGCTTCTGGAGAAGGTTCCCCGCTCCTCGAGTACCCAGAACGGATTCAACACCTTTCAGCAGTTCCTGGACAACCAGCAGTACACCAACCGCGGCATCCTGCGCTACGAGAAGATGTTCGGGGCTGGTTATGTCAGCACAGGGGGGCCCAGCACCACCAAGGAGTTTGTGGACCTGTTGAACCTGAAGCCCGGACAGAAGGTTCTAGATGTTGGCTGTGGCATTGGTGGAGGGGACTTTTACATGGCAAAGACCTTTGGAGTGGAGGTGCTTGGCCTGGATTTGTCAAACAACATGGTGGACATCGCCATGGAGAGGGCGATCACTGAGAAGCTGCCATCAGTACAGTTTGAGGTGGCTGATGCCACGAAGAGGTCGTTCCCAGAAGGTTCCTTTGATGTGATCTACAGCAGAGACACAATCCTGCACATAGATGACAAACTGGCCCTCTTCAAACGCCTCCATTCATGGTTAAAGCCAGGTGGAAAGTTGCTCATCAGTGATTACTGCTGCGGGGAGAAGCCCTGGACACCGGTGTTTGAGGCCTACGTCAAACAGAGAGGCTATGTCCTCTATACACCCTTACAGTATGGCAAGTTCCTCCAGGAAGCTGGTTTCTGCAATGTTTGCTCAGAAGACCGGACAGCCCAGTTTATCCAGGTGATAAAGACAGAACTGCAGAGAGCTGAAGTCATCAAGGATGAATTCATTCAGGAATTCTCTGAAGAGGACTATTTTGCAATAGTAAATGGATGGAGTGAAAAACTGGAACGTTCCAACAGTGGAGACCAACGATGGGGACTCTTTTATGCGACAAGGGATTGAGTGATTGCACTAAGAATTGAgaagacaataaaataaaaagaaaaaa
>XM_039814406.1
GGTCAAATACTGTTGATCAGCAAAAGTTGCCTATCCGGAAGCCGATGAGGGGAAAGTGCCGCTCGCTCACACCACTTCACAATTCAACATAAACCCTCGTAGCAACATGACAGAGTTTTGGAAAGAGCACTCCAAGGCCGCCACAGTGGAGGAGATGATGCTGGACTCTCGTGCCAGGGAGCTGACCCAACATGAGCTGCCCGAGATCCTGTCCGTACTGCCCAGCCTGGCTGGATCCAGAGTGCTGGAACTGGGAGCTGGCATCGGTCGTTTCACCAGCCACCTGCTGACCAAGGCTGGCCATGTGACTGCTGTGGACTTCATGGAAAGCTTTGTGGAGAGGAACAGGCAGGACAATGGTCACCATAGCAACGCTACCTTCATCCAAGCTGACGTAACAAAGCTGGATATCCCCCAAAACAGCATTGATTTTGTCTTTTCCAACTGGCTGCTGATGTACCTGAGCGACACAGAGCTAAAGTCGTTTATAGAGAAGACACTGAGCTGGCTGCGGCCCGGTGGCTTCTTTTTCTTCAGAGAGTCCTGCAACCACCGGTCAGGTGACTCCAAGAGGGACTTTAACCCCACTTGCTACCGCACTGAGGCACAATACAGCCACCTGGTATCATCACTACAAGTGGAGGTGCCAGAGGGGGGCCAAAAGTTTGGTTTCGACATTGTGTTGAAAAAGAAAGTTCAGGCCTATGTTGAGATGAAaaataatcagaatcagatcTGCTGGCTTCTGGAGAAGGTTCCCCGCTCCTCGAGTACCCAGAACGGATTCAACACCTTTCAGCAGTTCCTGGACAACCAGCAGTACACCAACCGCGGCATCCTGCGCTACGAGAAGATGTTCGGGGCTGGTTATGTCAGCACAGGGGGGCCCAGCACCACCAAGGAGTTTGTGGACCTGTTGAACCTGAAGCCCGGACAGAAGGTTCTAGATGTTGGCTGTGGCATTGGTGGAGGGGACTTTTACATGGCAAAGACCTTTGGAGTGGAGGTGCTTGGCCTGGATTTGTCAAACAACATGGTGGACATCGCCATGGAGAGGGCGATCACTGAGAAGCTGCCATCAGTACAGTTTGAGGTGGCTGATGCCACGAAGAGGTCGTTCCCAGAAGGTTCCTTTGATGTGATCTACAGCAGAGACACAATCCTGCACATAGATGACAAACTGGCCCTCTTCAAACGCCTCCATTCATGGTTAAAGCCAGGTGGAAAGTTGCTCATCAGTGATTACTGCTGCGGGGAGAAGCCCTGGACACCGGTGTTTGAGGCCTACGTCAAACAGAGAGGCTATGTCCTCTATACACCCTTACAGTATGGCAAGTTCCTCCAGGAAGCTGGTTTCTGCAATGTTTGCTCAGAAGACCGGACAGCCCAGTTTATCCAGGTGATAAAGACAGAACTGCAGAGAGCTGAAGTCATCAAGGATGAATTCATTCAGGAATTCTCTGAAGAGGACTATTTTGCAATAGTAAATGGATGGAGTGAAAAACTGGAACGTTCCAACAGTGGAGACCAACGATGGGGACTCTTTTATGCGACAAGGGATTGAGTGATTGCACTAAGAATTGAgaagacaataaaataaaaagaaaaaa

Function

NR:

description
PREDICTED: phosphoethanolamine N-methyltransferase 3-like

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description
K05929 E2.1.1.103, NMT; phosphoethanolamine N-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814405.1 True 1673 mRNA 0.49 12 22650378 22660250
XM_039814406.1 False 1610 mRNA 0.50 12 22650018 22660250

Neighbor

gene id symbol gene type direction distance location
mid2 mid2,LOC101473971,LOC102306025 coding upstream 46747 22435278 ~ 22603271 (+)
klhl4 klhl4,LOC103356419,LOC102308013 coding upstream 850023 21771722 ~ 21799995 (+)
ahnak NA coding upstream 889797 21724428 ~ 21760221 (+)
eef1g eef1g coding upstream 938543 21701403 ~ 21711475 (+)
polr2g polr2gl,rpb7,POLR2G,polr2g,LOC106604162 coding upstream 948711 21698086 ~ 21701307 (+)
zgc:152774 NA coding downstream 4640 22664890 ~ 22684172 (+)
f8 LOC104960537 coding downstream 25036 22685286 ~ 22705021 (+)
LOC120567158 NA coding downstream 83357 22743607 ~ 22753993 (+)
si:dkey-34l15.1 LOC104919989,LOC104960541 coding downstream 94391 22754641 ~ 22762526 (+)
zgc:195212 NA coding downstream 102235 22762485 ~ 22770301 (+)
G107073 NA non-coding upstream 18648 22631079 ~ 22631370 (+)
G107050 NA non-coding upstream 234683 22415002 ~ 22415335 (+)
LOC120566464 NA non-coding upstream 252967 22390353 ~ 22397051 (+)
G107025 LOC104954424,LOC103390732 non-coding upstream 271678 22331012 ~ 22378340 (+)
G106992 NA non-coding upstream 806068 21843662 ~ 21843950 (+)
LOC120567160 NA non-coding downstream 62775 22723025 ~ 22725653 (+)
G107149 NA non-coding downstream 163351 22823601 ~ 22823862 (+)
G107161 NA non-coding downstream 196405 22856655 ~ 22856868 (+)
G107164 NA non-coding downstream 205718 22865968 ~ 22866201 (+)
LOC120566955 NA non-coding downstream 206829 22867079 ~ 22875098 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other upstream 1181191 21448800 ~ 21468827 (+)
zdhhc5b zdhhc5 other upstream 1299040 21289531 ~ 21350978 (+)
selenoh selenoh other upstream 1366789 21279687 ~ 21283229 (+)
hrh2a LOC103354784,LOC104948895 other upstream 1702603 20934729 ~ 20947415 (+)
G106465 LOC104955902 other upstream 2297851 20351721 ~ 20352167 (+)
G107163 LOC103356264 other downstream 201940 22862190 ~ 22865676 (+)
ubxn1 ubxn1,LOC103374193 other downstream 243505 22903755 ~ 22909562 (+)
rom1b rom1,LOC102779683 other downstream 290345 22950595 ~ 22997038 (+)
G107168 NA other downstream 294722 22954972 ~ 22973761 (+)
flrt1b LOC103374305,LOC102200053 other downstream 439775 23100025 ~ 23132685 (+)

Expression


Co-expression Network