LOC120566464


Basic Information

Item Value
gene id LOC120566464
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22390353 ~ 22397051 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640407.1
TCAGGCATTGAGGGACAAGACTCCCACCAAGCTTGGTTGTGCGTGACTCGGATTTGTGGCGGCACGGCAAGGTGAGGAAGAAACGAGTACAAAGCGTTCAAATGTGTTTCCTGGAAAGCAATTAAAACTTCCCAGAGAAGATATTAAAGAGGAAGAGACTGGGAGAGGCACTGATCAGCGTACTAATCTTTGGCTTCAACCCCACCATAACACAAGAGCACTCTGCAGCGCATCATAAAATGGGAGAACTACGTCAAACTTAGAAGTGTTGTTGCAGTCTCTGAGCAGTACATTTCATCTGATTGGAATGCTTCAGGACAGCCTAACCCTGACTTCAGGCTCTTGTCTGACAGAAAGGCAtccacagagagaaaaagagcttGGCAGAACAGCTCCACCTTTTCAGTCTGCCAGCAGGACCAAACAGGTCCTCAGTCCAGAGAAATGAGAGCCACGGTTGTACACCATAAATTGCTGATATAAACAGCTTTATTTCTACATGGTCTGCGACTCACCGTGATAACTGCATGGTCATCCCAGAAGAAAAATGAGCCCCTCTTCAGTTGGGCAGGAGCACTTGAAGCCAATGAGTTTGGAAATTTGGACGCACCAGTAACAAACAGGAAACCATATTCATTACACTAAAGTCAGAGTTTGATTATGGTTCATGGGGATTTGCCAGTCATTTGGTCTTATTTTAGAGCATGTATACTGTAAACTGTAATTCAGAGTGGCAGttatattacattcaatttCTGCCAAGCTCTGCCTCTGccgacagaagaaaaaaaatgttttcttgacTTAGCAAAGAAGTGTATTGCATACTTGGATTCATCTGATGAAACAAACTCATTGCACCAAGGCGTGAGCAGGTTGCCTAAGATGTTCTCTCAGCTAGACAAGTCTCTCgcgtgtttcttttttttctaattctCTCAATGTTGTGCAAAAGCCCAGTTTAATGATGCAATTATGGATGACAGTACAGCACAGGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640407.1 True 1000 lncRNA 0.44 4 22390353 22397051

Neighbor

gene id symbol gene type direction distance location
klhl4 klhl4,LOC103356419,LOC102308013 coding upstream 590358 21771722 ~ 21799995 (+)
ahnak NA coding upstream 630132 21724428 ~ 21760221 (+)
eef1g eef1g coding upstream 678878 21701403 ~ 21711475 (+)
polr2g polr2gl,rpb7,POLR2G,polr2g,LOC106604162 coding upstream 689046 21698086 ~ 21701307 (+)
LOC120566253 LOC108261232 coding upstream 708291 21678714 ~ 21682062 (+)
mid2 mid2,LOC101473971,LOC102306025 coding downstream 38227 22435278 ~ 22603271 (+)
pmt LOC106930518,LOC102210468 coding downstream 252967 22650018 ~ 22660250 (+)
zgc:152774 NA coding downstream 267839 22664890 ~ 22684172 (+)
f8 LOC104960537 coding downstream 288235 22685286 ~ 22705021 (+)
LOC120567158 NA coding downstream 346556 22743607 ~ 22753993 (+)
G107025 LOC104954424,LOC103390732 non-coding upstream 12013 22331012 ~ 22378340 (+)
G106992 NA non-coding upstream 546403 21843662 ~ 21843950 (+)
G106975 NA non-coding upstream 626712 21763367 ~ 21763641 (+)
G106972 NA non-coding upstream 628909 21760998 ~ 21761444 (+)
G106851 NA non-coding upstream 943257 21446882 ~ 21447096 (+)
G107050 NA non-coding downstream 17951 22415002 ~ 22415335 (+)
G107073 NA non-coding downstream 234028 22631079 ~ 22631370 (+)
LOC120567160 NA non-coding downstream 325974 22723025 ~ 22725653 (+)
G107149 NA non-coding downstream 426550 22823601 ~ 22823862 (+)
G107161 NA non-coding downstream 459604 22856655 ~ 22856868 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other upstream 921526 21448800 ~ 21468827 (+)
zdhhc5b zdhhc5 other upstream 1039375 21289531 ~ 21350978 (+)
selenoh selenoh other upstream 1107124 21279687 ~ 21283229 (+)
hrh2a LOC103354784,LOC104948895 other upstream 1442938 20934729 ~ 20947415 (+)
G106465 LOC104955902 other upstream 2038186 20351721 ~ 20352167 (+)
G107163 LOC103356264 other downstream 465139 22862190 ~ 22865676 (+)
ubxn1 ubxn1,LOC103374193 other downstream 506704 22903755 ~ 22909562 (+)
rom1b rom1,LOC102779683 other downstream 553544 22950595 ~ 22997038 (+)
G107168 NA other downstream 557921 22954972 ~ 22973761 (+)
flrt1b LOC103374305,LOC102200053 other downstream 702974 23100025 ~ 23132685 (+)

Expression


Co-expression Network