trnaf-gaa_62


Basic Information

Item Value
gene id trnaf-gaa_62
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 6608134 ~ 6608206 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_449
gccgaaatagctcagttgggagagcgttagactgaacatctaaaggtccctggttcgatcccgggtttcggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_449 True 73 tRNA 0.53 1 6608134 6608206

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa_61 NA coding upstream 2368 6605694 ~ 6605766 (+)
trnad-guc_3 NA coding upstream 5323 6602650 ~ 6602811 (+)
trnaf-gaa_60 NA coding upstream 7842 6600220 ~ 6600292 (+)
trnaf-gaa_59 NA coding upstream 9064 6598998 ~ 6599070 (+)
trnaf-gaa_58 NA coding upstream 10625 6597437 ~ 6597509 (+)
trnaf-gaa_63 NA coding downstream 447 6608653 ~ 6608725 (+)
trnad-guc_4 NA coding downstream 1831 6610037 ~ 6610204 (+)
trnaf-gaa_64 NA coding downstream 8371 6616577 ~ 6616649 (+)
trnaf-gaa_65 NA coding downstream 9972 6618178 ~ 6618250 (+)
trnam-cau_18 NA coding downstream 591350 7199556 ~ 7199628 (+)
LOC120566291 NA non-coding upstream 53305 6554161 ~ 6554829 (+)
trnaf-gaa_29 NA non-coding upstream 60550 6547510 ~ 6547584 (+)
trnaf-gaa_28 NA non-coding upstream 61768 6546294 ~ 6546366 (+)
trnaf-gaa_27 NA non-coding upstream 62379 6545683 ~ 6545755 (+)
trnaf-gaa_26 NA non-coding upstream 62898 6545164 ~ 6545236 (+)
G103744 NA non-coding downstream 46766 6654972 ~ 6655228 (+)
G103752 NA non-coding downstream 105747 6713953 ~ 6714209 (+)
G103753 NA non-coding downstream 113044 6721250 ~ 6721597 (+)
G103788 NA non-coding downstream 507075 7115281 ~ 7115562 (+)
G103796 NA non-coding downstream 621269 7229475 ~ 7229888 (+)
irf2 irf2 other upstream 417570 6177996 ~ 6190564 (+)
G103305 NA other upstream 2538520 4068811 ~ 4069614 (+)
smad5 LOC103363483,LOC104920560,LOC103391130,LOC101064562 other upstream 2735301 3860635 ~ 3872833 (+)
G103034 NA other upstream 3092417 3514023 ~ 3515717 (+)
zgc:110843 cisd1 other upstream 3356503 3247545 ~ 3251631 (+)
trnam-cau_9 NA other downstream 247976 6856182 ~ 6856254 (+)
G103836 NA other downstream 1013432 7621638 ~ 7643183 (+)
LOC120567362 NA other downstream 1731210 8339416 ~ 8346534 (+)
LOC120567404 LOC104951845 other downstream 1866410 8474616 ~ 8476449 (+)
G104301 NA other downstream 3309666 9917872 ~ 9918315 (+)

Expression


Co-expression Network