G115095


Basic Information

Item Value
gene id G115095
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16094010 ~ 16097398 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155232
AATTTGTTACAACTTTATTAATGAACATGTCAACATTTCAAAAGTCAGAACAGTTAAttcaaaaaaacaatatatttgataatatacacaacacatgaaactttttttattttttttttttacctctaaTGCATGCTCCTTGTTTTGTCTTCTACACCCCCACGAACTCTGTGTTGAAACACTGAGCATCTCACATGTACAGATGAACAGAAACAGTGACCCTTTAACTACAgagaaaagtgatttaaaaaaaataaccccCAAATTTTACTGCCAATAAAACTGTGCAAGTCATTTAAAGTACATCACTTCCTGTCCTCATCCAACTTTCTAAAGCACATTCCTACTGACTAAAGGTTACTAATGAATGCATTCAAGCGACAAAAATAAACCATCAGACAACTCTAAATACACTATGGCATCATGGTTATAAAAACAGTCGATCCGAGCTGAAAAACATGTATCTGACCAACACTTTGCAATCACAGAATTTAAATTTCATTGCGTTGCTGTTTTACCTTATCACTGGAGCTCTTGAACGGTCTACGTTCAGCAGTGGGGATTGACTCAAAGGATTCCTCCTTTTGGGGACAAACTACGACAGGGCCTGATTCTATGACCTAAGCTTGCAGCGTCCTCCAACACTGTGAGCGAGAAGTGAAGTTTCAATAGTAGATTTGCACTGCACTTGAGGGCAGATTCACACCacgacagaaaaaaaaaattatatatgtaTTTCACCGTTTCTTGATCTAGCGGTTGAGCACATTGCTAACTTCTGGCAACAGGTTGTAATGGCATGCAGTTTTGATATACCAGTATCAAAGTTGTCTAAAGCATCGATACACAGTCGCCATCAGACTTACCAGGATGCAAAGATAAGGCTATCATCAAATATTAAGCACATACGACAATGACATTTCCTTAGTGAGCCTATGCAACTACTTTTTCTGGGTAAAGTCACTTTTTGAAAAGTCAAACTTCATGTAACAAGTCATACAGCTCATGTCATGCAGTTCATTCATGAAAGCAGATCTCAAAGGGCTGTTCATACTTAGATATATCCTGGACATTTCTTTACGACTAAGCATAAAATGCATTGAGGCATGTTAAAGACACAGGTAAGCATTTCTTTGCATGTAAATTGGTCATGTCACTGGACAAAAACACTGGTTTCCTTAGGTTTCGCTTACCTGTGTTATTGCAGCAGAACCTAAGGTGCAAGGTCTGGGACGACACTGCAAAGATCAGATATATTGCACTGTTTGCCATCAGTGAACAATGCTTAAAATTAACAGCCTTTCACAACAGTGCTCATTCAGAAAAGGTCATAATACTGGGCTATTCAGAAGCACTTCCACTACTAGCATTCCACATGCTCATATAGGACATTAAAAGTAATAACAGCAGAAGAAACCTAAGCATGCTACACTGGAGTTATGCAGTAGGACTTTTGAAAGCAATATGATGCAATAAATGGCATTTAAAAATATGACAGTCTCAACTAGACAATGGCACTTAGCAGTTCAGGTATTcaaaacgcaaaaaaaataaaccacatGGGCATCCTTAAACAGTTCCTACCAACAGTGTAACAGAGTGCTGACATTCAAACGCAGTTCAGAAATCCAACTGGCAATGAAATGCTACCTACACAAATAGTCTAACAATCTAACAAGTATCAACATATTGTTAAGATTCAAAGTCTGAATGTAGTAGTCACAAAGGGAAATAAGTCTCAGAAATATGTGGTACAATATTCTAAAGTACTATTCCTCTCCTCAGAACATTTCATACTTACCCAGAGACATAGGGAAATGGCaatatttgacaaaaaaatactACATCTTTGGCAGTTTGTAAAGCATCAAATAAGGCGTTTCTCTCAGTCAGTCACAGTTTTGTACTTACAGTATAGGAGGGCTCAACTGATGGATGAAGACTGCTTAGCCACCCCCGACCCTACAACATCTATGTTCTTATATTCGATAAACACTAACAGAATGGGGACAGCAATGGCGATTTTGcaatgtttttatattaaaaaaacattcttttaaaaaaaacaaatttatacATGTGAGTTAGTTCGCAATTTGAAATGGGCAAGACAAACGTTTCAAAGCATTTTCGATACAGTGGCAATTTACCTGACTGTCCTGGAAGAAGAACAccacaaaatatataacactaAAAATGCAACATTTCTTGCAACCACGTTTTCGGAGGAACATGTTAAGGAAGAACACTTGCTTACCGCTTTACTAAACTTTcctgtggaggaggaagtgtcTATATCAAGGCAAAATACAGAGCATACTACCTCAACAATGTCAGCAAACCAggcaaaaattttaaaaaaaaaaaaaaggagtgcCACAGCAACGCAGTTAATGCATGATAGATACCTGTCGACTTTCTTATGACAAACATCCGTCTACTGCTAAAGTCAGAGCAAAGTCAGGAAACACACGTGTAAAAAAAGGTCTATCAACAAGGACGTTTGTTGGTCTGAACCACTCAGGATCATTGCACGCACATAATGTATCTAAGAGCCTTATAGACAGTTGGAGAGAGACAGGACAGCACAACTTTTGAGTCAACCATTTTGGACAATTGAACATGGCCTGCgtttcaacccccccccccccgtaaaataaaaacatacagatATTCCTCTTAACCCTTTTGGTTTAAAACCACCCCAACTTACCAACAAAGgaggtttcagtttgttttattgCAAAAACACAACAGGCAATAGCATTTTAAAACTGAGATGATTTACATGGTAATGTCTACAGTTTAATAAACATGAGTTCTAACCACATTTAATGTAGATACAGGGCTGGAATGACCATATGTATAATTACCTCACTAAAAACAAAGCATTtacaagaaaaatgaaaaaaaaaaatgaaaaaaaaaaaggaggacgTGTTCGCAGGGTAATCTGCCATCTATGTGAAACACTTTCAAACCAAGGAAATTTAAGATCTTCATCAAGGCGTCTGCATCCAAACATTAAACAAAGGATTTTGTTTCGACAATGTAGCATTTACTTTATGTCCACTTCACATTACTGGCCCTGTGCAGAAGAAATACATAGAAGATACATTGCATGTTAACAACAGAAACAGTGGACTCAGCTtcccaaaataaaaaattaaaacctgttTAGGGAGGAAATTTTTTGGTTAAGTGTGTAAACTGCTGCAGCCACCGGAGCCCTGTAAAACCTGAGGAAGGAAGGCTATTAGGGCACAAAATAATTGAGTATTCAGTGGATGTGGCGGGCAGATTCTTATCGGGGGTGTACCTGAGGGGCTTGTGGTGCTGCACCCATCGTCTGAGGGTTGGCTGTGCCGTAGTAAGCGGCCTGCTGGCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155232 True 3389 lncRNA 0.38 1 16094010 16097398

Neighbor

gene id symbol gene type direction distance location
miga1 miga1 coding upstream 72 16078487 ~ 16093938 (+)
ak5 ak5,LOC102787869 coding upstream 62170 15956359 ~ 16031840 (+)
rabggtb rabggtb coding upstream 348782 15737192 ~ 15745228 (+)
acadm acadm coding upstream 360495 15725767 ~ 15733515 (+)
LOC120569145 NA coding upstream 370213 15723729 ~ 15723797 (+)
dnajb4 dnajb4,LOC102785119 coding downstream 15842 16113240 ~ 16118518 (+)
gipc2 gipc2 coding downstream 22170 16119568 ~ 16136858 (+)
LOC120569020 btf3l4,LOC100695932 coding downstream 46709 16144107 ~ 16148770 (+)
zfyve9a NA coding downstream 53807 16151205 ~ 16180854 (+)
pak1ip1 pak1ip1 coding downstream 124645 16222043 ~ 16226092 (+)
G115055 NA non-coding upstream 245718 15843154 ~ 15848292 (+)
LOC120568726 NA non-coding upstream 334902 15746177 ~ 15759108 (+)
G114998 NA non-coding upstream 416667 15677093 ~ 15677343 (+)
G114991 NA non-coding upstream 468687 15625102 ~ 15625323 (+)
G114944 NA non-coding upstream 544090 15549129 ~ 15549920 (+)
LOC120568625 NA non-coding downstream 6320 16103718 ~ 16107792 (+)
G115103 NA non-coding downstream 38767 16136165 ~ 16138828 (+)
LOC120568989 NA non-coding downstream 112512 16209910 ~ 16216365 (+)
G115123 NA non-coding downstream 120064 16217462 ~ 16217694 (+)
G115124 NA non-coding downstream 121784 16219182 ~ 16219443 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other upstream 172479 15865586 ~ 15921531 (+)
st6galnac3 st6galnac3 other upstream 250916 15764683 ~ 15843094 (+)
slc35a3b LOC103357859,LOC104957008,LOC101481522,LOC102792347 other upstream 525516 15554471 ~ 15568494 (+)
zgc:153115 klf13,LOC104948390,LOC103358333,LOC101073550,LOC105030379,LOC106568757,LOC107752329 other upstream 565241 15520782 ~ 15528769 (+)
asip2b agrp2,LOC105941385,LOC102299529,LOC102795060,LOC103358555 other upstream 615548 15472702 ~ 15478462 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other downstream 128909 16226307 ~ 16228551 (+)
LOC120568419 LOC102779359 other downstream 341627 16439025 ~ 16527682 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other downstream 512978 16610376 ~ 16612206 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other downstream 1309099 17406497 ~ 17483553 (+)
LOC120567767 NA other downstream 1929882 18027280 ~ 18029895 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000003_02449147_02456088 FUBP1 coding CI01000003 null 2448635 ~ 2456088 (-)
eurasian perch (Perca fluviatilis) G135193 NA non-coding NC_053124.1 CM020921.1 21142852 ~ 21143962 (-)
tiger barb (Puntius tetrazona) G123137 NA unknown NC_056715.1 CM032084.1 21784749 ~ 21785321 (+)