G126515


Basic Information

Item Value
gene id G126515
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 23704385 ~ 23704642 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU170213
ATTACTTTTTGAAGGTGTAAACTGCAATTTAATTGTGGGGTATACTTAActtattatatatgttgaatTGTATGCctattttgtattattgcatgtacTTTGGCATCTATGATACAGTTCATCATCAAAAGTGTGATCACGGCCTTCCTGGAAAAGAGAGGCtttctttaaaggtgccctatggaggaaatatttattcataattcaaattgaaagtccaaagagaaattgaaagtccaaagagaaaacaaagcgaga

Function

GO: NA

KEGG:

id description
ko00350 Tyrosine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU170213 True 258 lncRNA 0.33 1 23704385 23704642

Neighbor

gene id symbol gene type direction distance location
asmtl NA coding upstream 458 23695387 ~ 23703927 (+)
p2ry8 p2ry8,gpr82,LOC103134757 coding upstream 9191 23690836 ~ 23695194 (+)
upf3a upf3a,LOC104960519 coding upstream 14508 23679658 ~ 23689877 (+)
cdc16 cdc16,LOC102786741 coding upstream 27110 23663340 ~ 23677275 (+)
cfap97d2 NA coding upstream 41194 23657254 ~ 23663191 (+)
ppp2r3b ppp2r3b,LOC100705877,LOC102783484,LOC107099188,LOC102198241 coding downstream 200494 23905136 ~ 23929409 (+)
usp9 usp9x,LOC104960511,LOC100693451 coding downstream 275095 23979737 ~ 24028770 (+)
itga4 itga4 coding downstream 362628 24067270 ~ 24089428 (+)
LOC120569576 NA coding downstream 433485 24138127 ~ 24152773 (+)
LOC120569575 ssfa2 coding downstream 448434 24153076 ~ 24179221 (+)
G126463 nalcn non-coding upstream 303999 23399891 ~ 23400386 (+)
G126447 NA non-coding upstream 351565 23352577 ~ 23352820 (+)
G126439 zic5,LOC102789084 non-coding upstream 467562 23232867 ~ 23236823 (+)
LOC120569671 NA non-coding upstream 735215 22966626 ~ 22969170 (+)
G126358 NA non-coding upstream 906073 22797901 ~ 22798312 (+)
G126516 NA non-coding downstream 301 23704943 ~ 23705702 (+)
G126519 NA non-coding downstream 5761 23710403 ~ 23711118 (+)
G126520 NA non-coding downstream 8846 23713488 ~ 23713977 (+)
G126563 NA non-coding downstream 241502 23946144 ~ 23947968 (+)
G126581 NA non-coding downstream 300431 24005073 ~ 24005642 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other upstream 604302 22978602 ~ 23100083 (+)
G126363 lmo7 other upstream 889283 22807193 ~ 22815102 (+)
fbxl3a fbxl3 other upstream 965732 22730923 ~ 22738653 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other upstream 2012581 21655126 ~ 21691804 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other upstream 2069628 21619348 ~ 21634757 (+)
cwc22 cwc22 other downstream 479307 24183949 ~ 24199835 (+)
sestd1 sestd1 other downstream 572515 24277157 ~ 24298218 (+)
fzd5 LOC104950716,LOC108238837 other downstream 667829 24372471 ~ 24394985 (+)
cacnb4a cacnb4 other downstream 1925465 25630107 ~ 25664427 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other downstream 2412346 26116988 ~ 26129879 (+)

Expression


Co-expression Network