LOC120569808 (gja8,LOC102792462)


Basic Information

Item Value
gene id LOC120569808
gene name gja8,LOC102792462
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 19732903 ~ 19736945 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817908.1
CCTGCGTCACCACACGTCGCCCGGCAAATAAAGGCCGTCTGGCTCCAAGCTTAAATATTGCAGGAAACTAAAAACCAACCATCAGAGCCGATTCATTCACATCTGCTCAGTGGGGCGACAAGGACGGGGCTTTAGGTGGGAAAGAGGGCAGAAAAAAGTTCACTTTTCCCTGCCGGGTGCCAAGAGAACGGGACAGGACTCAACTTCGCCGGAGCCGCAGCTGTGTGCTACGGACCGATCATGGGTGACTGGAGCTTTCTGGGTAATATTTTAGAGGAAGTTAACGAGCACTCTACGGTGATCGGCCGGGTGTGGCTCACGGTGCTCTTCATCTTCCGTATCCTCATTCTGGGCACGGCGGCGGAGTTTGTGTGGGGCGATGAGCAGTCTGACTATGTCTGCAACACACAGCAGCCCGGATGTGAAAATGTGTGCTACGACGAGGCCTTCCCCATCTCCCACATCCGCCTGTGGGTGCTGCAGATCATTTTTGTGTCCACACCATCTCTGGTGTACGTGGGTCATGCTGTGCACCATGTCCACATGGAGGAGAAACGCAAAGAGCGAGAGGAGGCAGAACTTAGCCGGCAGCAGGAGCTGAGTGAGGAGCGTCTCCCTCTGGCACCTGACCAGGGAAGTGTCCGCACCACTAAGGAGACCAGCACAAAAGGAAGCAAGAAGTTCCGGCTGGAGGGCACACTGCTGAGGACCTACATCTGCCACATCATCTTCAAGACACTGTTTGAGGTGGGCTTCGTGGTGGGCCAGTACTTCCTGTATGGCTTCCGCATCCTGCCACTGTACAAATGCAGCCGCTGGCCCTGCCCCAATACAGTTGACTGCTTTGTGTCTCGCCCCACGGAGAAGACCGTCTTCATCATCTTTATGTTGGCTGTCGCCTGTGTCTCACTCTTCCTCAACTTTGTGGAGATCAGTCACCTGGGCCTGAAGAAGATTCGCTTTGTCTTTCGCAAGCCGGCCCCCGCCCCAGCCCAAGGTGAGGGCTCGGCCCCCCTGCCGCCACAAGGGAAGAGCCTGCCCCCCCTGGCTGTGCCCTCCCTGCAGAGAGCGAAAGGTTACaagctgctggaggaggagaaagtTCCCATAACTCACCTCTATCCACTGGCTGAGGTGGGCATGGAGGCTGGCAGAGGGGCCCCACCCTTCCCGGGGCTGCAGGAGAAGGTGGAGGAGGTGCTGCCCATGGGGGACATCTCTAAGGTGTATGATGAGACTCTGCCCTCCTACGCCCAGACCACTGAAACAGCGGGGGTGACATTACAcgaggaggaggcagaggaggtgCAGCCGGCCAAGGTGGAAGCAGAGAGAGTGGAGGAggttgttgatgatgatgtggaGGTAGAGGAAGCAGTGAAAGGGGAGGGGGCAGGGATGGAGGCCACGGATACGATAGAAGACACCAGACCACTGAGCCGACTGAGCAAAGCCAGCAGCAGGGCCAGGTCAGACGATCTCACCGTATGAACCTGTGAGAGAGAGCACAtgtacacacctgcacacaccaAAAGTTCAACATAAGagagagcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatctaactCAAGACAACGCACACTCTTGGTGTGGTCAAAAACCAatggatgaaaaacaaaatcaacaggGATAGATTAAAACCTTTGAGACACAAGCAACAATTCTACATAGCGACAAAAAATCTGCGTGTTtgtgataaaaatgaaatataaaaagtaGAGGTTAAAGAGGGGAGGAGTAGGTTTTTTATTAAGCGTGttcttatatttaaaaaatgtggaaAGGACACATGCAGGGGGGAAATGTTTTTACTTGATGAAAATCCATGTTCaatttttaaaaacatctttTTCTATTGAAAGAGTTTTAATCATATACAATGGAGGATTAGACATTTGTACATGGGGTTTGAGTAGACAGGGGAAAGAGAGTTATAATATACTTGTGTGTCTGCAAATCAGTAATTTCGCTGTAGTTAGGCACTGACTTTAATTTCCCTTCAGACAGCGACATACTGCAAATGCAGCATGTGGCTGCACACGGCACGGGTGAGAGGGCTCTCACTATACACAAACCACACAATTAAGTGCCGGTACATTTGCAGGTATACAGCTCTttgagaagaggaagaaaagtcAATTTTCAGGTTGAGAAGAGCATACCTTTGTTTTTGCACATTCAGAGGTTTAGACTCTGTGCAAGGCCTTTAACCCTCATAACACCTCATCTATGCATCCATTTACACAGGATTCTTTCAAGTGAAGAGAGATGTGCATCAATTTCAGAGCATTTCTCTCCTTTTCATGTTTATATACCAGGTAGCACAGCCAGAGCTGAGTTAGTGaggaaaaccccccaaaaaagaccACTTGTTGAATGTCTTTTTCAATGTGATTCTGCATATCTTCATTTTAGATTTGCTCATGTTTTGTAGCATTTAAGTAGAACTGTGTACTGTGATATCAGTTGGCACCATGGCAGAGAACAGGCCTCATTTTGCCCTATCAGAGAATGAACTATAGTAGCGACCTCAGGCCAAATCCTCTCTTTTCGTGCTGTACAAACAGGCGTCCGGGCGATAAAGATCATGCACCATCAGCACAAAGTATTGTTGGAGGCCAGACAATAAAAGAAACCGCACTCATCAATGAAAACAAGCATCCTTGACCTGGCTGTGAAAAAAATCTTTCTACTTGATTTTAATGTGACCATAGTAGGTCCTCACCCCGTAGTCAAATAGCAATACTCATGACATGCTTTCAAATtcaaagagaaacaaacaaCTAGGGCCTGCTGTACATAATGCCCTATCTCATGTCTGATAATGCACATAATGTGCAGAGCAGCtgttttctgttatttcacTGTCTAGATGAATCACAGAAGTTCTCATTGTGATTACAATATTGATTTAATCTCACTAACACGATATAGTAAAAAGAAAATTCCCTCACTGCGGTGTTGTGCATCTGTCTGAGTAAAGATGAATTTTTTGGGAATCATTAGCAAGTATACGTTAAGCCTTAAAGTATGCCTTAGGTTTATCACAAATCTTCCTCTCACATTCTCTGGCTTTGTTTATTCAAACAGCTGCCACTGTATGATTTTCTGTGTCTTACCTGTAAATGTAAATTCTCAAATGTTGTAAGATTGTAGCAAGTGCTTATATTGCTCTGGGACCTATGTgaatttgatgttttatttgcttcttttttatttttattatctgAGTTTCATTTTGTATGCGACCCCTTAGCACACACAAAAGTCCACCCACACCCACAAGAAGACCTGTCTCTAATATGATGGTTAATTCAAGTATTACCATGATAATTTAATGATGTTAAGAAGATATTAGGGCATAAAGTGGCATgtttcaggacatgaacacacTTAAACAGTGCAGGCttcgcccacacacacacacacacacacacacacacacacacacacacacacac
>XM_039817909.1
ATTTAATCTATATCATACCTTACAGAAGCAGGGACTATTTGTTACCTATTGATCTCTCTTTATTGGTTTTTATCGGGGAGTTTTTGTGAGGAATTTTTTAAAGAGCTAGAGCAAGTGCTACGGACCGATCATGGGTGACTGGAGCTTTCTGGGTAATATTTTAGAGGAAGTTAACGAGCACTCTACGGTGATCGGCCGGGTGTGGCTCACGGTGCTCTTCATCTTCCGTATCCTCATTCTGGGCACGGCGGCGGAGTTTGTGTGGGGCGATGAGCAGTCTGACTATGTCTGCAACACACAGCAGCCCGGATGTGAAAATGTGTGCTACGACGAGGCCTTCCCCATCTCCCACATCCGCCTGTGGGTGCTGCAGATCATTTTTGTGTCCACACCATCTCTGGTGTACGTGGGTCATGCTGTGCACCATGTCCACATGGAGGAGAAACGCAAAGAGCGAGAGGAGGCAGAACTTAGCCGGCAGCAGGAGCTGAGTGAGGAGCGTCTCCCTCTGGCACCTGACCAGGGAAGTGTCCGCACCACTAAGGAGACCAGCACAAAAGGAAGCAAGAAGTTCCGGCTGGAGGGCACACTGCTGAGGACCTACATCTGCCACATCATCTTCAAGACACTGTTTGAGGTGGGCTTCGTGGTGGGCCAGTACTTCCTGTATGGCTTCCGCATCCTGCCACTGTACAAATGCAGCCGCTGGCCCTGCCCCAATACAGTTGACTGCTTTGTGTCTCGCCCCACGGAGAAGACCGTCTTCATCATCTTTATGTTGGCTGTCGCCTGTGTCTCACTCTTCCTCAACTTTGTGGAGATCAGTCACCTGGGCCTGAAGAAGATTCGCTTTGTCTTTCGCAAGCCGGCCCCCGCCCCAGCCCAAGGTGAGGGCTCGGCCCCCCTGCCGCCACAAGGGAAGAGCCTGCCCCCCCTGGCTGTGCCCTCCCTGCAGAGAGCGAAAGGTTACaagctgctggaggaggagaaagtTCCCATAACTCACCTCTATCCACTGGCTGAGGTGGGCATGGAGGCTGGCAGAGGGGCCCCACCCTTCCCGGGGCTGCAGGAGAAGGTGGAGGAGGTGCTGCCCATGGGGGACATCTCTAAGGTGTATGATGAGACTCTGCCCTCCTACGCCCAGACCACTGAAACAGCGGGGGTGACATTACAcgaggaggaggcagaggaggtgCAGCCGGCCAAGGTGGAAGCAGAGAGAGTGGAGGAggttgttgatgatgatgtggaGGTAGAGGAAGCAGTGAAAGGGGAGGGGGCAGGGATGGAGGCCACGGATACGATAGAAGACACCAGACCACTGAGCCGACTGAGCAAAGCCAGCAGCAGGGCCAGGTCAGACGATCTCACCGTATGAACCTGTGAGAGAGAGCACAtgtacacacctgcacacaccaAAAGTTCAACATAAGagagagcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatctaactCAAGACAACGCACACTCTTGGTGTGGTCAAAAACCAatggatgaaaaacaaaatcaacaggGATAGATTAAAACCTTTGAGACACAAGCAACAATTCTACATAGCGACAAAAAATCTGCGTGTTtgtgataaaaatgaaatataaaaagtaGAGGTTAAAGAGGGGAGGAGTAGGTTTTTTATTAAGCGTGttcttatatttaaaaaatgtggaaAGGACACATGCAGGGGGGAAATGTTTTTACTTGATGAAAATCCATGTTCaatttttaaaaacatctttTTCTATTGAAAGAGTTTTAATCATATACAATGGAGGATTAGACATTTGTACATGGGGTTTGAGTAGACAGGGGAAAGAGAGTTATAATATACTTGTGTGTCTGCAAATCAGTAATTTCGCTGTAGTTAGGCACTGACTTTAATTTCCCTTCAGACAGCGACATACTGCAAATGCAGCATGTGGCTGCACACGGCACGGGTGAGAGGGCTCTCACTATACACAAACCACACAATTAAGTGCCGGTACATTTGCAGGTATACAGCTCTttgagaagaggaagaaaagtcAATTTTCAGGTTGAGAAGAGCATACCTTTGTTTTTGCACATTCAGAGGTTTAGACTCTGTGCAAGGCCTTTAACCCTCATAACACCTCATCTATGCATCCATTTACACAGGATTCTTTCAAGTGAAGAGAGATGTGCATCAATTTCAGAGCATTTCTCTCCTTTTCATGTTTATATACCAGGTAGCACAGCCAGAGCTGAGTTAGTGaggaaaaccccccaaaaaagaccACTTGTTGAATGTCTTTTTCAATGTGATTCTGCATATCTTCATTTTAGATTTGCTCATGTTTTGTAGCATTTAAGTAGAACTGTGTACTGTGATATCAGTTGGCACCATGGCAGAGAACAGGCCTCATTTTGCCCTATCAGAGAATGAACTATAGTAGCGACCTCAGGCCAAATCCTCTCTTTTCGTGCTGTACAAACAGGCGTCCGGGCGATAAAGATCATGCACCATCAGCACAAAGTATTGTTGGAGGCCAGACAATAAAAGAAACCGCACTCATCAATGAAAACAAGCATCCTTGACCTGGCTGTGAAAAAAATCTTTCTACTTGATTTTAATGTGACCATAGTAGGTCCTCACCCCGTAGTCAAATAGCAATACTCATGACATGCTTTCAAATtcaaagagaaacaaacaaCTAGGGCCTGCTGTACATAATGCCCTATCTCATGTCTGATAATGCACATAATGTGCAGAGCAGCtgttttctgttatttcacTGTCTAGATGAATCACAGAAGTTCTCATTGTGATTACAATATTGATTTAATCTCACTAACACGATATAGTAAAAAGAAAATTCCCTCACTGCGGTGTTGTGCATCTGTCTGAGTAAAGATGAATTTTTTGGGAATCATTAGCAAGTATACGTTAAGCCTTAAAGTATGCCTTAGGTTTATCACAAATCTTCCTCTCACATTCTCTGGCTTTGTTTATTCAAACAGCTGCCACTGTATGATTTTCTGTGTCTTACCTGTAAATGTAAATTCTCAAATGTTGTAAGATTGTAGCAAGTGCTTATATTGCTCTGGGACCTATGTgaatttgatgttttatttgcttcttttttatttttattatctgAGTTTCATTTTGTATGCGACCCCTTAGCACACACAAAAGTCCACCCACACCCACAAGAAGACCTGTCTCTAATATGATGGTTAATTCAAGTATTACCATGATAATTTAATGATGTTAAGAAGATATTAGGGCATAAAGTGGCATgtttcaggacatgaacacacTTAAACAGTGCAGGCttcgcccacacacacacacacacacacacacacacacacacacacacacacac

Function

symbol description
gja8 Enables gap junction channel activity. Involved in gap junction-mediated intercellular transport. Located in plasma membrane. Is integral component of plasma membrane. Part of connexin complex. Implicated in cataract and cataract 1 multiple types.

NR:

description
PREDICTED: gap junction alpha-8 protein

GO:

id name namespace
GO:0007154 cell communication biological_process
GO:0005922 connexin complex cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K07617 GJA8, CX50; gap junction alpha-8 protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817908.1 True 3533 mRNA 0.47 2 19732903 19736945
XM_039817909.1 False 3423 mRNA 0.46 2 19733149 19736945

Neighbor

gene id symbol gene type direction distance location
bcl9 bcl9 coding upstream 39605 19661727 ~ 19693298 (+)
si:dkey-229b18.3 NA coding upstream 86993 19637886 ~ 19645910 (+)
chaf1b chaf1b coding upstream 96902 19624352 ~ 19636001 (+)
morc3a NA coding upstream 110825 19610107 ~ 19622078 (+)
dop1b dopey2 coding upstream 127607 19584119 ~ 19605296 (+)
LOC120569809 NA coding downstream 4690 19741635 ~ 19744772 (+)
LOC120570226 fstl1 coding downstream 65289 19802234 ~ 19823687 (+)
lrrc58b lrrc58,LOC102790154 coding downstream 88579 19825524 ~ 19833375 (+)
gpr156 gpr156,LOC103373478 coding downstream 102119 19839064 ~ 19850975 (+)
LOC120569649 LOC104952805 coding downstream 105286 19842231 ~ 19844942 (+)
G125267 NA non-coding upstream 146248 19491538 ~ 19586655 (+)
G125274 NA non-coding upstream 180962 19551358 ~ 19551941 (+)
G125266 NA non-coding upstream 264113 19467432 ~ 19468790 (+)
G125115 NA non-coding upstream 877873 18852566 ~ 18855030 (+)
G125114 slitrk5,LOC100690770 non-coding upstream 881108 18845407 ~ 18851795 (+)
G125369 NA non-coding downstream 11121 19748066 ~ 19814268 (+)
LOC120570225 NA non-coding downstream 55064 19792009 ~ 19801958 (+)
G125397 NA non-coding downstream 162289 19899234 ~ 19899437 (+)
G125465 NA non-coding downstream 170642 19907587 ~ 19907822 (+)
G125480 NA non-coding downstream 193987 19930932 ~ 19937248 (+)
igsf3 LOC103352919,LOC104967650 other upstream 273629 19388015 ~ 19459274 (+)
tmsb4x NA other upstream 642118 19089418 ~ 19090785 (+)
LOC120570507 NA other upstream 905356 18818753 ~ 18827547 (+)
G125079 NA other upstream 1028375 18703028 ~ 18704528 (+)
hnrnpa3 hnrnpa3 other upstream 1715490 18010757 ~ 18017413 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other downstream 231415 19968360 ~ 19993324 (+)
myo16 myo16,LOC103372229 other downstream 416910 20153855 ~ 20265590 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other downstream 755233 20492178 ~ 20521274 (+)
mpc2b mpc2 other downstream 1116144 20853089 ~ 20858916 (+)
G125757 rpl24 other downstream 1123207 20860152 ~ 20865442 (+)

Expression


Co-expression Network