LOC120570209


Basic Information

Item Value
gene id LOC120570209
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 18956693 ~ 18962174 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818437.1
tattaattcattcatttgtgGTTTCTCTGCACACCGCTGTTTCACAATGAGTCAAGGATACCAAGGAGAAGACTGACACACTTGAAACATTCGCCAGGCAAATCAACTGAGATGGCTTTGACTACAAATCCTGGACTTGTAAACAAACAGAGTTTAAGCTCACCTGAATATCTGACAATCCATGCATTTGATGGGAGAGTTGTCACCAGAATCAGCGTTGGTACACAAACTGACTGGAGACATGAGGAAGAGTGCAGTCAAGGTACTTTCTTCAAATTTCATGACTATAAATACCCAAAGCAAGAAACATCAACAGCTCCTCACAATAATCTGGGGTTACTATCTGAGCAGAGCGTTTCTAAAAACATGAAGTCTGAACTGGAGATATCCCCAGATAATGAATTGTTGGATTCGCTCAGCAAGGAAAGTCCCCAAACTCCTGCAGCCTGCCAAGGAGAAACTGAGGAGTCTCTAACTAATCTGGACAAGATCACATCCTCAAGTGGATCAGACCCATCAGAGGAGTCGCTGCAGACTGTGTTGAACATTTGCTGTTTGCACTGCCAGCAGCTGAAGAAACCCCCAGTGACCAGCGATCAGATAGCAAACAGTGTTGACACAAAAGAGTTTTTCTGCTGTGAGAAGGCATGGAAGATATCACAGATTTTGCTGAAGGGTGCAGCGGTTATCAGTAAAGAAACCGTGACTGATTGGGACCCAGCGATGCAGAAAGATGAAAGGTTCAAAGGTTTGGAATTTGAAAGGAGCTTCTATCAGACCCCTAAAGCAggtcacactctctcacacacacacttcctatTGTTCATCCATGCCACCTTTACCTATATTACAGCACACAAACTAGTGTCCGTCACTCTACATAATGAACTCACTGAAGATGCTTCAACTGCCATGAAGGAAGTTTCATTCCCTGAAATAGAAATTGTGGATATtgaaaacactttttctttcaATGGACTAAATGCTAGACAGAAGAGGACGACACCACTTGTCAAACACTACAATAATGGTCAAACATTTATTGTGATTTTCCCAGATGGAACTGGGCAGGTGTGCTATCCGTCAGGAAGGCTGGCTATTCTTCTGTCCGCTTCACAGTCTGCTGACTGGTGTTGTGTGCTGGTCCTGGAGGACAAACATCTGCAGCCTTGCATTCAGGCAGTTTTCACCACCAGAGGAGAGGCTACCTGTTATCACAACAATGGCAGCATTTGGGTGAATCTGACTCCATGGGGAGGCACCTACTGCAGTGACACAGGAGatttgaagaaacattggggatgGCTGGACGATAAGGATCATGTTCATGCTCCGCCGTACCAGCCCCTTGGCCTGACAATGAGCCCTAACCTCAACATCCGCATCCAATCCCAAGAGGACATCTGCATCACTTTCACCTCCAGCGAACGCAGTGTACGGCTTAATGTAGGGACAAAATTGAAACCGAATCAAGGCAAAGGTCTAATGCTGCCGGGGCCTGACATGCTTCAGAGGTATCTGCAGCAGAAGAGTGCAGAGATCAATGTCCTGCTCCAGAACATCCAGTCCCTCATCACCTTTCAAAAGAAGGTCAAGCCCCAGCAAAGCCTCATCTCACAGATGGAAAGACAGCAGCTGCCAACGAAACAGCAACAGTCTGCCAAGAAGACCCCCTAAAGCCGATG
>XM_039818438.1
tattaattcattcatttgtgGTTTCTCTGCACACCGCTGTTTCACAATGAGTCAAGGATACCAAGGAGAAGACTGACACACTTGAAACATTCGCCAGGCAAATCAACTGAGATGGCTTTGACTACAAATCCTGGACTTGTAAACAAACAGAGTTTAAGCTCACCTGAATATCTGACAATCCATGCATTTGATGGGAGAGTTGTCACCAGAATCAGCGTTGGTACACAAACTGACTGGAGACATGAGGAAGAGTGCAGTCAAGGTACTTTCTTCAAATTTCATGACTATAAATACCCAAAGCAAGAAACATCAACAGCTCCTCACAATAATCTGGGGTTACTATCTGAGCAGAGCGTTTCTAAAAACATGAAGTCTGAACTGGAGATATCCCCAGATAATGAATTGTTGGATTCGCTCAGCAAGGAAAGTCCCCAAACTCCTGCAGCCTGCCAAGGAGAAACTGAGGAGTCTCTAACTAATCTGGACAAGATCACATCCTCAAGTGGATCAGACCCATCAGAGGAGTCGCTGCAGACTGTGTTGAACATTTGCTGTTTGCACTGCCAGCAGCTGAAGAAACCCCCAGTGACCAGCGATCAGATAGCAAACAGTGTTGACACAAAAGAGTTTTTCTGCTGTGAGAAGGCATGGAAGATATCACAGATTTTGCTGAAGGGTGCAGCGGTTATCAGTAAAGAAACCGTGACTGATTGGGACCCAGCGATGCAGAAAGATGAAAGGTTCAAAGGTTTGGAATTTGAAAGGAGCTTCTATCAGACCCCTAAAGCAggtcacactctctcacacacacacttcctatTGTTCATCCATGCCACCTTTACCTATATTACAGCACACAAACTAGTGTCCGTCACTCTACATAATGAACTCACTGAAGATGCTTCAACTGCCATGAAGGAAGTTTCATTCCCTGAAATAGAAATTGTGGATATtgaaaacactttttctttcaATGGACTAAATGCTAGACAGAAGAGGACGACACCACTTGTCAAACACTACAATAATGGTCAAACATTTATTGTGATTTTCCCAGATGGAACTGGGCAGGTGTGGTATCCTTTAAGGCTGGCTATTCTTCTGTCCGCTTCACAGTCTGCTGACTGGTGTTGTGTGCTGGTCCTGGAGGACAAACATCTGCAGCCTTGCATTCAGGCAGTTTTCACCACCAGAGGAGAGGCTACCTGTTATCACAACAATGGCAGCATTTGGGTGAATCTGACTCCATGGGGAGGCACCTACTGCAGTGACACAGGAGatttgaagaaacattggggatgGCTGGACGATAAGGATCATGTTCATGCTCCGCCGTACCAGCCCCTTGGCCTGACAATGAGCCCTAACCTCAACATCCGCATCCAATCCCAAGAGGACATCTGCATCACTTTCACCTCCAGCGAACGCAGTGTACGGCTTAATGTAGGGACAAAATTGAAACCGAATCAAGGCAAAGGTCTAATGCTGCCGGGGCCTGACATGCTTCAGAGGTATCTGCAGCAGAAGAGTGCAGAGATCAATGTCCTGCTCCAGAACATCCAGTCCCTCATCACCTTTCAAAAGAAGGTCAAGCCCCAGCAAAGCCTCATCTCACAGATGGAAAGACAGCAGCTGCCAACGAAACAGCAACAGTCTGCCAAGAAGACCCCCTAAAGCCGATG
>XM_039818439.1
tattaattcattcatttgtgGTTTCTCTGCACACCGCTGTTTCACAATGAGTCAAGGATACCAAGGAGAAGACTGACACACTTGAAACATTCGCCAGGCAAATCAACTGAGATGGCTTTGACTACAAATCCTGGACTTGTAAACAAACAGAGTTTAAGCTCACCTGAATATCTGACAATCCATGCATTTGATGGGAGAGTTGTCACCAGAATCAGCGTTGGTACACAAACTGACTGGAGACATGAGGAAGAGTGCAGTCAAGGTACTTTCTTCAAATTTCATGACTATAAATACCCAAAGCAAGAAACATCAACAGCTCCTCACAATAATCTGGGGTTACTATCTGAGCAGAGCGTTTCTAAAAACATGAAGTCTGAACTGGAGATATCCCCAGATAATGAATTGTTGGATTCGCTCAGCAAGGAAAGTCCCCAAACTCCTGCAGCCTGCCAAGGAGAAACTGAGGAGTCTCTAACTAATCTGGACAAGATCACATCCTCAAGTGGATCAGACCCATCAGAGGAGTCGCTGCAGACTGTGTTGAACATTTGCTGTTTGCACTGCCAGCAGCTGAAGAAACCCCCAGTGACCAGCGATCAGATAGCAAACAGTGTTGACACAAAAGAGTTTTTCTGCTGTGAGAAGGCATGGAAGATATCACAGATTTTGCTGAAGGGTGCAGCGGTTATCAGTAAAGAAACCGTGACTGATTGGGACCCAGCGATGCAGAAAGATGAAAGGTTCAAAGCACACAAACTAGTGTCCGTCACTCTACATAATGAACTCACTGAAGATGCTTCAACTGCCATGAAGGAAGTTTCATTCCCTGAAATAGAAATTGTGGATATtgaaaacactttttctttcaATGGACTAAATGCTAGACAGAAGAGGACGACACCACTTGTCAAACACTACAATAATGGTCAAACATTTATTGTGATTTTCCCAGATGGAACTGGGCAGGTGTGCTATCCGTCAGGAAGGCTGGCTATTCTTCTGTCCGCTTCACAGTCTGCTGACTGGTGTTGTGTGCTGGTCCTGGAGGACAAACATCTGCAGCCTTGCATTCAGGCAGTTTTCACCACCAGAGGAGAGGCTACCTGTTATCACAACAATGGCAGCATTTGGGTGAATCTGACTCCATGGGGAGGCACCTACTGCAGTGACACAGGAGatttgaagaaacattggggatgGCTGGACGATAAGGATCATGTTCATGCTCCGCCGTACCAGCCCCTTGGCCTGACAATGAGCCCTAACCTCAACATCCGCATCCAATCCCAAGAGGACATCTGCATCACTTTCACCTCCAGCGAACGCAGTGTACGGCTTAATGTAGGGACAAAATTGAAACCGAATCAAGGCAAAGGTCTAATGCTGCCGGGGCCTGACATGCTTCAGAGGTATCTGCAGCAGAAGAGTGCAGAGATCAATGTCCTGCTCCAGAACATCCAGTCCCTCATCACCTTTCAAAAGAAGGTCAAGCCCCAGCAAAGCCTCATCTCACAGATGGAAAGACAGCAGCTGCCAACGAAACAGCAACAGTCTGCCAAGAAGACCCCCTAAAGCCGATG
>XM_039818440.1
CTCACAATAATCTGGGGTTACTATCTGAGCAGGTCAGTGTGTTGTAGATGTAGTAAATACCCAGAAGACGGTTCACAACGACAAACTTGCAATGAGGTATTCTTGCTTGTAAAGTCCCCTTCTCTCTCAACTTTAGTGATGATGTCCCTGACAAAGTAAAAGCTTTGCGAGGACACTCAAGAAGCGTTTCTAAAAACATGAAGTCTGAACTGGAGATATCCCCAGATAATGAATTGTTGGATTCGCTCAGCAAGGAAAGTCCCCAAACTCCTGCAGCCTGCCAAGGAGAAACTGAGGAGTCTCTAACTAATCTGGACAAGATCACATCCTCAAGTGGATCAGACCCATCAGAGGAGTCGCTGCAGACTGTGTTGAACATTTGCTGTTTGCACTGCCAGCAGCTGAAGAAACCCCCAGTGACCAGCGATCAGATAGCAAACAGTGTTGACACAAAAGAGTTTTTCTGCTGTGAGAAGGCATGGAAGATATCACAGATTTTGCTGAAGGGTGCAGCGGTTATCAGTAAAGAAACCGTGACTGATTGGGACCCAGCGATGCAGAAAGATGAAAGGTTCAAAGGTTTGGAATTTGAAAGGAGCTTCTATCAGACCCCTAAAGCAggtcacactctctcacacacacacttcctatTGTTCATCCATGCCACCTTTACCTATATTACAGCACACAAACTAGTGTCCGTCACTCTACATAATGAACTCACTGAAGATGCTTCAACTGCCATGAAGGAAGTTTCATTCCCTGAAATAGAAATTGTGGATATtgaaaacactttttctttcaATGGACTAAATGCTAGACAGAAGAGGACGACACCACTTGTCAAACACTACAATAATGGTCAAACATTTATTGTGATTTTCCCAGATGGAACTGGGCAGGTGTGCTATCCGTCAGGAAGGCTGGCTATTCTTCTGTCCGCTTCACAGTCTGCTGACTGGTGTTGTGTGCTGGTCCTGGAGGACAAACATCTGCAGCCTTGCATTCAGGCAGTTTTCACCACCAGAGGAGAGGCTACCTGTTATCACAACAATGGCAGCATTTGGGTGAATCTGACTCCATGGGGAGGCACCTACTGCAGTGACACAGGAGatttgaagaaacattggggatgGCTGGACGATAAGGATCATGTTCATGCTCCGCCGTACCAGCCCCTTGGCCTGACAATGAGCCCTAACCTCAACATCCGCATCCAATCCCAAGAGGACATCTGCATCACTTTCACCTCCAGCGAACGCAGTGTACGGCTTAATGTAGGGACAAAATTGAAACCGAATCAAGGCAAAGGTCTAATGCTGCCGGGGCCTGACATGCTTCAGAGGTATCTGCAGCAGAAGAGTGCAGAGATCAATGTCCTGCTCCAGAACATCCAGTCCCTCATCACCTTTCAAAAGAAGGTCAAGCCCCAGCAAAGCCTCATCTCACAGATGGAAAGACAGCAGCTGCCAACGAAACAGCAACAGTCTGCCAAGAAGACCCCCTAAAGCCGATG
>XM_039818441.1
tattaattcattcatttgtgGTTTCTCTGCACACCGCTGTTTCACAATGAGTCAAGGATACCAAGGAGAAGACTGACACACTTGAAACATTCGCCAGGCAAATCAACTGAGATGGCTTTGACTACAAATCCTGGACTTGTAAACAAACAGAGTTTAAGCTCACCTGAATATCTGACAATCCATGCATTTGATGGGAGAGTTGTCACCAGAATCAGCGTTGGTACACAAACTGACTGGAGACATGAGGAAGAGTGCAGTCAAGGTACTTTCTTCAAATTTCATGACTATAAATACCCAAAGCAAGAAACATCAACAGCTCCTCACAATAATCTGGGGTTACTATCTGAGCAGAGCGTTTCTAAAAACATGAAGTCTGAACTGGAGATATCCCCAGATAATGAATTGTTGGATTCGCTCAGCAAGGAAAGTCCCCAAACTCCTGCAGCCTGCCAAGGAGAAACTGAGGAGTCTCTAACTAATCTGGACAAGATCACATCCTCAAGTGGATCAGACCCATCAGAGGAGTCGCTGCAGACTGTGTTGAACATTTGCTGTTTGCACTGCCAGCAGCTGAAGAAACCCCCAGTGACCAGCGATCAGATAGCAAACAGTGTTGACACAAAAGAGTTTTTCTGCTGTGAGAAGGCATGGAAGATATCACAGATTTTGCTGAAGGGTGCAGCGGTTATCAGTAAAGAAACCGTGACTGATTGGGACCCAGCGATGCAGAAAGATGAAAGGCTGGCTATTCTTCTGTCCGCTTCACAGTCTGCTGACTGGTGTTGTGTGCTGGTCCTGGAGGACAAACATCTGCAGCCTTGCATTCAGGCAGTTTTCACCACCAGAGGAGAGGCTACCTGTTATCACAACAATGGCAGCATTTGGGTGAATCTGACTCCATGGGGAGGCACCTACTGCAGTGACACAGGAGatttgaagaaacattggggatgGCTGGACGATAAGGATCATGTTCATGCTCCGCCGTACCAGCCCCTTGGCCTGACAATGAGCCCTAACCTCAACATCCGCATCCAATCCCAAGAGGACATCTGCATCACTTTCACCTCCAGCGAACGCAGTGTACGGCTTAATGTAGGGACAAAATTGAAACCGAATCAAGGCAAAGGTCTAATGCTGCCGGGGCCTGACATGCTTCAGAGGTATCTGCAGCAGAAGAGTGCAGAGATCAATGTCCTGCTCCAGAACATCCAGTCCCTCATCACCTTTCAAAAGAAGGTCAAGCCCCAGCAAAGCCTCATCTCACAGATGGAAAGACAGCAGCTGCCAACGAAACAGCAACAGTCTGCCAAGAAGACCCCCTAAAGCCGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818437.1 True 1685 mRNA 0.46 11 18956693 18962174
XM_039818438.1 False 1682 mRNA 0.46 11 18956693 18962174
XM_039818439.1 False 1580 mRNA 0.46 12 18956693 18962174
XM_039818440.1 False 1516 mRNA 0.47 9 18957468 18962174
XM_039818441.1 False 1334 mRNA 0.47 9 18956693 18962174

Neighbor

gene id symbol gene type direction distance location
LOC120570212 NA coding upstream 3012 18947919 ~ 18953681 (+)
cnmd LOC103352944,LOC102292237 coding upstream 20745 18931420 ~ 18935948 (+)
si:ch211-199f5.1 LOC104947498,LOC103352952,LOC100689962 coding upstream 25219 18927543 ~ 18931474 (+)
dct dct coding upstream 254141 18695106 ~ 18702552 (+)
sox21b sox21 coding upstream 279211 18675287 ~ 18677482 (+)
frmpd4 frmpd4 coding downstream 79977 19042151 ~ 19076783 (+)
tlr7 tlr7,LOC102778011 coding downstream 115015 19077189 ~ 19082770 (+)
LOC120569791 NA coding downstream 119959 19082133 ~ 19088916 (+)
egfl6 egfl6 coding downstream 142012 19104186 ~ 19112692 (+)
rab9a rab9a,LOC104925019,LOC103392032 coding downstream 151231 19113405 ~ 19116298 (+)
G125115 NA non-coding upstream 101663 18852566 ~ 18855030 (+)
G125114 slitrk5,LOC100690770 non-coding upstream 104898 18845407 ~ 18851795 (+)
G125110 NA non-coding upstream 126785 18829619 ~ 18829908 (+)
G125109 NA non-coding upstream 127167 18828933 ~ 18829526 (+)
G125104 NA non-coding upstream 127780 18828686 ~ 18828913 (+)
G125266 NA non-coding downstream 505258 19467432 ~ 19468790 (+)
G125267 NA non-coding downstream 529364 19491538 ~ 19586655 (+)
G125274 NA non-coding downstream 589184 19551358 ~ 19551941 (+)
G125369 NA non-coding downstream 785892 19748066 ~ 19814268 (+)
LOC120570225 NA non-coding downstream 829835 19792009 ~ 19801958 (+)
LOC120570507 NA other upstream 129146 18818753 ~ 18827547 (+)
G125079 NA other upstream 252165 18703028 ~ 18704528 (+)
hnrnpa3 hnrnpa3 other upstream 939280 18010757 ~ 18017413 (+)
hoxd10a hoxd10,LOC102792757 other upstream 1075365 17860160 ~ 17881328 (+)
myo3b myo3b other upstream 1758103 17127881 ~ 17198590 (+)
tmsb4x NA other downstream 127244 19089418 ~ 19090785 (+)
igsf3 LOC103352919,LOC104967650 other downstream 425841 19388015 ~ 19459274 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other downstream 1006186 19968360 ~ 19993324 (+)
myo16 myo16,LOC103372229 other downstream 1191681 20153855 ~ 20265590 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other downstream 1530004 20492178 ~ 20521274 (+)

Expression


Co-expression Network