LOC120570569


Basic Information

Item Value
gene id LOC120570569
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 17010145 ~ 17011912 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641083.1
agGGAAAACCAGGTTATAAAGGAGAGCAGGGTGAGAGGGGTGAGTGCGGCACTCCAGGAATCAAAGGAGACAGGGGTCCTGAGGGTTCAGTTGGAGCAAGAGGACTTAGAGGTTTACAGGGGTTACCAGGACCACATGGAGACATTGGACCAGAGGGCCATCAGGGAAAGCAGGGTGAACGTGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641083.1 True 186 lncRNA 0.55 5 17010145 17011912

Neighbor

gene id symbol gene type direction distance location
rdh1 LOC102203631,LOC106926445,LOC103461719,LOC103134343,LOC100699208 coding upstream 72050 16930122 ~ 16938095 (+)
LOC120570363 NA coding upstream 80760 16919996 ~ 16929385 (+)
LOC120570362 NA coding upstream 90312 16910073 ~ 16919833 (+)
LOC120570364 g6pc2 coding upstream 116044 16892198 ~ 16894101 (+)
nostrin nostrin coding upstream 123953 16877709 ~ 16886192 (+)
bbs5 bbs5 coding downstream 14453 17026365 ~ 17030715 (+)
klhl41a klhl41 coding downstream 19248 17031160 ~ 17035529 (+)
ppig ppig coding downstream 29970 17041882 ~ 17049327 (+)
phgdh phgdh coding downstream 45893 17057805 ~ 17065455 (+)
klhl23 klhl23 coding downstream 54333 17066245 ~ 17070476 (+)
LOC120570570 NA non-coding upstream 1637 17006585 ~ 17008508 (+)
G124524 lrp2 non-coding upstream 52231 16956725 ~ 16957914 (+)
G124430 NA non-coding upstream 306216 16703371 ~ 16703929 (+)
G124407 cobll1 non-coding upstream 377804 16598643 ~ 16632341 (+)
G124408 NA non-coding upstream 380031 16596708 ~ 16630114 (+)
G124627 tlk1,LOC102777640 non-coding downstream 244930 17256842 ~ 17257502 (+)
G124631 NA non-coding downstream 249825 17261737 ~ 17262826 (+)
G124661 NA non-coding downstream 425449 17437361 ~ 17437819 (+)
G124671 NA non-coding downstream 457836 17469748 ~ 17498759 (+)
LOC120569550 NA non-coding downstream 593233 17605145 ~ 17614067 (+)
dap1b dapl1 other upstream 908503 16099271 ~ 16101642 (+)
LOC120570321 NA other upstream 1032271 15970982 ~ 15977874 (+)
galnt13 galnt13,LOC102796746 other upstream 1349131 15618514 ~ 15661014 (+)
sumo3b sumo3,LOC106562996,LOC107668404,LOC106523318 other upstream 1436297 15506984 ~ 15573848 (+)
trpm2 trpm2 other upstream 1851208 15137587 ~ 15158937 (+)
myo3b myo3b other downstream 115969 17127881 ~ 17198590 (+)
hoxd10a hoxd10,LOC102792757 other downstream 848248 17860160 ~ 17881328 (+)
hnrnpa3 hnrnpa3 other downstream 998845 18010757 ~ 18017413 (+)
G125079 NA other downstream 1691116 18703028 ~ 18704528 (+)
LOC120570507 NA other downstream 1806841 18818753 ~ 18827547 (+)

Expression


Co-expression Network