gal3st2 (LOC104950586)


Basic Information

Item Value
gene id gal3st2
gene name LOC104950586
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 42739636 ~ 42768566 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791142.1
cacacagaggagagagaagactGCAGACAGGAAGGATCACGGAGACCGTCGCAGTGGGACTTTGTCGGGGTTTTTTGTTGGGGTTTCTGAGAGATGCTGTCCCCACCGAGGAGATGGATCAGAGACCAATGTCCGAGCGCTGTAACCTCgtgtgtgaggagagggGTGTGCAGCAGGCGTCACTCTCTGTGGATACTGCTAATCCTGCTCGTGGTCTGTATTGCCATTCAGATGTTTGTCGCCCGCCAGGCCAGGAATGACAAGCTGACAGGACTCCCACATCTGAGATTGACTGTCAACAAACCGCACCTGTTTTCTACTGcacaaaatgaatgggaaatcgTTCATTCTGAGTCTTCACAGGCAGTAAAGACAGACCTGAGGTCACTACAGATTGACAGAACTGCAGCTCGTCATCATCAAAATGAGGGATATCAAAAGCAATCGGTTTATATTCAGTCAAGACCTGTGGATAACCTTGCTACAGGCTCTCAGATGGAGGCAAGAAAAGTTTCACCTGTGACGATGCTTCTACCTAAACTTGTAACAAGCCTTGGACTTCCAGGTTCTTTGGCCCTAGACAGTAGTAGAAAAGGTTTAACTGCAGACACTCCCACCCCAAGTTTTTTAAAGGCTCACATCAACAGTGTTCATACGACATCAACCTGCCACCCAAAGTCTCACATTCTTTTTCtcaagacacacaaaacagcaagCAGTACCATCTTAAATATTCTTTATCGCTATGGTGAAAGCAGGAACTTGACCTTTGCCCTACCTCTGAACAAACACAGCCAGTTGTTTTACCCATTCTTCTTTGCTTCACATTTTGTGGAAGGTTTCAACAGCCGAAGTGTAAGGGAGTTCCACATCATGTGCAACCACATGAGGTTTACAAAATCTGAGGTGGCAAAAGTGATGCCTGAGGATACCTTCTACTTTTCCATCTTGAGGCATCCTGTGGCCATGATGGAGTCCATCTTTATCTACTACAAGAGCATCCCAGCCTTCCACAAGACTCACAGCCTGGACAGCTTTTTAGACAGCAGCTGGAGAAACTACAACTCATCTGTGAAAAACAACCACTACGCTCATAATATCCTGGCTTTTGACTTTGGCTTTGACAACAATGTTGCAGCTGATACTGAAGACCTGGAGGAGAGAGCCAGCATGGCTATTGCAGCTATTGAGAGGGACTTCCACCTTATTCTTATTTCTGAATATTTTGATGAGTCCATGATCTTGCTCAAGCATGCCCTCTGCTGGTCCCTGGAAGACGTGGTTTCCTTTAAGCTCAACGGTCGCAGTGAACAAACTCGTCACCCACTTTTACCAAACACTGCAGAAAAAATCAAGAGGTGGAATGCTTTGGACTGGAGGATCTACCTGCACTTTAACACCACCTTCTGGCACAAGATGGATAGTCTTGTTGGGCAAGAGCAGATGAAGAGGGAAGTATCTCAGTTGAGAGAGCTACAGGCCAAGCTAGCAAACAGCTGCCTGAAAGATGGCGGGGCAGTTGACCCATCCCAGATTAAAGATGCCGGACTAAAGCCATTCCAGTATGGAGCAGCTGTAATTCAGGGCTATAACCTAAAcccacacatagacagacaaaccaaaataaaatgtcaaagacTTATAACTCCAGAACTGCAGTACACAGACCGTCTATACACCCAGCAGTTCCCAGAGCTAGCTGCTAAGCATAGACAAGAAACAAGGATGGTTGCTCCGCAACGTCAACGCTCAGACAGAACTGGTATGATGGGAATGGCCTGGGCCAGGGAAGCCCATCACAGACAAATTATAAGAAGCAAATTCTCAAATCTAAGGAACCAAAAGGCCTCCACAAGTGCcatgttaacacacacagaagataacaacaaaacaagtaTGCTATGACTGGTAACTGTGACTAATAGTCACGGGACAATGTTTTGTTTGTACTGTGATGTATGGAAGCAGCTCTTCCGTCTAATATTTACTTTCTATAATTACACTGCCATTGCAGTATCCATTATAACCCACATTATGAAAGTGttgatataaaacaaagaacATATGGTTTGGCTGTTATCCTTGCTAATAGTGAAGATAAAAATTTAGAGGTTTTCTTAAGGTGGGGGTAAAGGAACTGTCATAGTGTTATAAATGGGGGTTCATCCTGTCAATAACATGAATGTATGTTTTGTGGTAATCAGCCAATTATATTTCTTTTGTATAAAGTGGAAAATTTGGCCTGATGGTGGCACCAAACAAAAATTCAGACTTGCACCAAATGAACATGGTTCATCTTTTGATTGGAGATGCACGGATCCATTTTTCTCAGTTCCGGTTATGATACCTGAATCATACAATCTTGCATAAAATTTAAATGTATTCCAAAGGAATTGAACTGTATGAGTACACATTGCTATggcaatgtttttaaaaaacttAAACAAATCAAGTGCACAGCTATGTTAATGGTCTTGGCGGGAATTGTTGGCTCTTTGTTAATTataaagtgtggtctagacctactctatctgtaaagtgttctgagataacttctgttataatttgacataaataaaattgaatttcaagtagatttctttaaattagttCATAATTAATAAGAACATTTCAAGAAATGTGTAGGGAAATAAATATCTACACTATCAGAAAACCCTATTAAAGAAGTTAAAAACCAATGTGTGTGGCTGCTTCTTAAACCTGCTTTGGTACATGGTGTTtcagccatagactgtataatatgaatggacagagcatgtgtgacgtcacacattggtttgtggagatctgctatgagtcgtcgagtttgccgttacgcgCAGCCATCCAAGTTGTgtatgtgacgatttt

Function

NR:

description
PREDICTED: galactose-3-O-sulfotransferase 2-like, partial

GO: NA

KEGG:

id description
K09675 GAL3ST2; galactose-3-O-sulfotransferase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791142.1 True 2871 mRNA 0.42 4 42739636 42768566

Neighbor

gene id symbol gene type direction distance location
fat3a fat3 coding downstream 117676 42393288 ~ 42621960 (-)
ttc36 ttc36 coding downstream 470214 42267074 ~ 42269422 (-)
LOC120547924 NA coding downstream 743289 41886984 ~ 41996347 (-)
cep126 NA coding downstream 887086 41833504 ~ 41852550 (-)
yap1 yap1 coding downstream 911687 41795353 ~ 41827949 (-)
LOC120549271 NA coding upstream 136247 42904813 ~ 42910737 (-)
efhd1 efhd1,LOC100691052,LOC101463816,LOC102780618,LOC103377704 coding upstream 224225 42992791 ~ 43063245 (-)
LOC120553532 NA coding upstream 612560 43381126 ~ 43383213 (-)
LOC120570616 LOC104946633,LOC103355253,LOC102792009,LOC102302768,LOC102198488 coding upstream 798014 43566580 ~ 43578411 (-)
omgb omg coding upstream 1314519 44083085 ~ 44087251 (-)
LOC120553091 NA non-coding downstream 7253 42731419 ~ 42732383 (-)
G23416 NA non-coding downstream 24490 42714932 ~ 42715146 (-)
G23396 NA non-coding downstream 66042 42673188 ~ 42673594 (-)
G23395 NA non-coding downstream 96356 42643070 ~ 42643280 (-)
G23354 NA non-coding downstream 401770 42337662 ~ 42337866 (-)
LOC120570523 NA non-coding upstream 53047 42821613 ~ 42832671 (-)
LOC120572866 NA non-coding upstream 69887 42838453 ~ 42840995 (-)
G23470 NA non-coding upstream 158586 42927152 ~ 42927449 (-)
G23473 NA non-coding upstream 165767 42934333 ~ 42934806 (-)
G23486 NA non-coding upstream 211096 42979662 ~ 42979887 (-)
cntn5 NA other downstream 572599 42029673 ~ 42167037 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other downstream 2269460 40290005 ~ 40470176 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other downstream 2706480 39943571 ~ 40033156 (-)
LOC120570635 sel1l3,LOC103353588 other downstream 4003813 38727508 ~ 38735823 (-)
robo2 NA other downstream 4091037 38353024 ~ 38648599 (-)
LOC120574039 nlk,nlk2 other upstream 468116 43236682 ~ 43346673 (-)
LOC120553425 NA other upstream 932405 43700971 ~ 43716741 (-)
smco4 NA other upstream 1001500 43770066 ~ 43789435 (-)
mrps23 mrps23 other upstream 2048062 44816628 ~ 44824993 (-)
bet1l bet1l other upstream 4366288 47134854 ~ 47142596 (-)

Expression


Co-expression Network