G130835


Basic Information

Item Value
gene id G130835
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 2582205 ~ 2582584 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU176178
CCGCgggtagctagttagctagctagcgcttaCTGATAGCTCAAGCTGGTGTGCCATTTGTGTATTATATTTGTAACTTACCTTgatatgtttcttcaaattcaaCGGTGAATTTTTGAAGGCCATTATTTCGCAATCTTTCGGGAGGCAGAGTAGGCACTTCATTCTATATGAATTGTCTTTCACTTcgacaaatgaaaacatggactCTAAGTAGGGCCAGGGGTGGTCTCCTTCCTCACCCTCACCGCCACGATCACTTGAAAGTTGAAGGTGTTGAAGGTGGTGTTTCTGCTTCTTCCATCTCGAAACAAACTAACAAAGATCAAGTGTTCTCAATGTAGGTGGGCAGCAGAGTGAAAGGCAGAATGGGAGCACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176178 True 380 lncRNA 0.44 1 2582205 2582584

Neighbor

gene id symbol gene type direction distance location
si:dkey-222b8.4 kiaa0895 coding upstream 226019 2330595 ~ 2356186 (+)
LOC120570829 LOC106674472,LOC106537358 coding upstream 283062 2282114 ~ 2299143 (+)
tac1 tac1 coding upstream 365913 2210096 ~ 2216292 (+)
sdhaf3 sdhaf3 coding upstream 488607 2078233 ~ 2093598 (+)
col28a1a LOC103357135,LOC106588681 coding upstream 557700 1971060 ~ 2024505 (+)
LOC120571676 LOC103375101 coding downstream 1957 2584541 ~ 2588952 (+)
LOC120571754 NA coding downstream 210249 2792833 ~ 2794731 (+)
nkiras1 nkiras1,LOC102786732 coding downstream 315391 2897975 ~ 2903198 (+)
LOC120571721 LOC103367584 coding downstream 538310 3120894 ~ 3133756 (+)
pdik1l pdik1l coding downstream 558497 3141081 ~ 3156578 (+)
G130834 NA non-coding upstream 90 2581711 ~ 2582115 (+)
LOC120571664 NA non-coding upstream 98849 2479792 ~ 2483356 (+)
LOC120571663 NA non-coding upstream 102475 2477414 ~ 2479730 (+)
G130817 NA non-coding upstream 121810 2451191 ~ 2460395 (+)
G130805 NA non-coding upstream 172725 2356852 ~ 2409480 (+)
G130838 NA non-coding downstream 12090 2594674 ~ 2594908 (+)
G130859 NA non-coding downstream 201221 2783805 ~ 2784065 (+)
LOC120570859 NA non-coding downstream 204836 2787420 ~ 2792006 (+)
G130870 NA non-coding downstream 214735 2797319 ~ 2797623 (+)
G130871 NA non-coding downstream 216358 2798942 ~ 2799159 (+)
G130504 NA other upstream 1710855 870810 ~ 871350 (+)
si:ch211-152p11.4 LOC106593811 other upstream 2200564 353305 ~ 381641 (+)
G130343 LOC107386814 other upstream 2312281 269176 ~ 269924 (+)
sf3a3 sf3a3 other downstream 466441 3049025 ~ 3076057 (+)
LOC120571299 rarb,LOC103362260 other downstream 1010961 3593545 ~ 3826146 (+)
G131253 NA other downstream 1917760 4500344 ~ 4500961 (+)
G131255 NA other downstream 1918484 4501068 ~ 4501732 (+)
G131277 NA other downstream 2006811 4589395 ~ 4599956 (+)

Expression


Co-expression Network