LOC120571539 (LOC103366048)


Basic Information

Item Value
gene id LOC120571539
gene name LOC103366048
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 29140196 ~ 29153709 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820539.1
CCATATTTTGAATCCATATTTGGCAAACGGAGAGGAAGAGGTGGATGTGCGTGGAGCAGAAGCGGTGAGTGGTCGCCGCCGGACAGACCAACCTGTGCTCGGCTCTACCCGGAACCATTATGCAGACAGGAAACTACCATTTTAACGCTAGCAGCATCCAGGCAGCATCGGAGGAGCCGTCGTATACAGAGGGGGGGCACCTAAATCTGACACGGGGCGGAAAACAGCAAACCgaggagaaaagaaggaaaaacacgacggaaacaaaacaaaggcGCCGTTTGGGTGAAGTCGAGCAGTAAAGCCGGTGGAGCGGTAGGAATTTGGCGGCAGACAATGGACATATCGGGCCGGGCCAACGGAAATACTTTTTGTTAGCGAGTGAAAAGCAGCCCTCCCGGGCCGATGGAGAGCCAGGCCTTTCACAGTGTTTTTCCATGGATGAAGAAAAAGGCCCCGCTGACGGGCAGTAGGGACCCCGCTCTCACGGCGCACTCCCCGCTCGATGTTTTCACACTTTTGCTCCCATGTTTCTGAGCTTCTCTCTGCATCTATCCATATTGGGCTACaagGCCGTCGACCTGAAGTCGGCGGAGAGAGCAGACATTTCCACCGCCCCCCTCCCCTAAACAGCTGCGGTCCAGCAGGGAGCTCCAGACCTGGGGATCAGTCGGCTGTCCGAAGAACTCCATGAGGGGACAGAAGGGCAGTGAAGCAATGGTTCACCCTCCACTGAAATAACGGACACACTGCACTTCATGGGACTactgacctgaattttaaaaatcCGCCAATGGCTATGGAACCCTTTAAAGAAACACTAcagacagtttttcttttttttttcctttttaatagtataatttagttttattgcctatttatgacctttttttttttataaaatctcACAGAAGCACTCTTAAATGAGGAGTAaaaatatttatacatttatgtgaaaaaaaatcgaGCATCGGCTTTTGGTGGAATATAGCAGTTTGTTGGAAGTGTGGGGGGGCCAGGGGGGGGGGCGGTCAGGACTACCTCTGAAAACCCCACCTGGTCCATTTTGACAAGGGGTCACTGCTGTTTCCCAGCAAACAAACCGGCTTAGTGCACGTGGCAGTTGTGGCTACGTGACACTCTGCCACAGCTGTATTGGAAGATGTTCCAGTTCAGCAAGTACCCCATGGACATTTTGGAGATGCTGAGTGGACACCAGGCCCACCAGTTCAAAGGCCTCGGGTTGGAGCGCCAACTGAGCCACCAGCAGCAGGTCCAGctgcagcatcagcagcagctccagcagcagcaccagccCTCCGCCGACGGCTCTGGGAGCCTCCTGTCTGGCCTCGGCCTCGGGTCCCTCCAGAGTTCTCGGAGCAATGCCTTCGCCGACTCCTCGTCCTTATTCGCCAAAATGGGCGCCCCTCCCCCATCCATCTCCCATCAGAGCCAGTCGTCCTCTTCGTCCCACAGTTCCCGGAAGTCCAGCAagatgagcagcagcagcagcagtggtagCGGGAGCTCGGGGTACCCCCAGTTTCTGCGGCCTTTCCACCCGGCCGAGGCTGCGCTGGCTCAGGAGCAGCTCCACTCCGGGATGGGCCGCTTTGACTTTGGCGGGAGCAGCGGCGGAGTTGTCACGCCTGCGCCCCCGCCTCCGCCGCTGCACCCGGGTCTCTCTGTCCCTCAGCCCTCCACTGGTCCCACCTCTTCCTCGGCCTCCCCCTCTACCTCTTCCGCGGCCTCCAACAACCCCTCCGGCAGCACCGCAGTCCCCTTAGTCAGCCAGTCGGATCCCCGCAGCCTCCACCAGCAGTTCAGCTGCATGCTCGCCGCCAACCAGTACTTCCTGTCCGGCGTGCCCACCAACAGCAGCCTGGAGCAGTTCCTCGTCCAGCAAGGCACTCACAACCACTTGGGCCTGGGTCTGGGCCAAGGGGTCAGTGAGTCCAACTCGGCCCTGGCCCCTCCCCCCGCCCTTCACTCCTCCCACAGCCACAGCCACACAGCTCCACCGcctcagcagcaacagcagcagctgacCCCCCATGCCTTATCTCATCCACACAGCCACACTCACCACCCGCACCCTCTCCACCCGGCTCCCCAGCCTGCCCCGCTGGGTGGCTTTGATTTCCAAGGCATTCCAGTCCTTTCCTCTAACCAGATAGCATCACTAATGCAGCAAGAGGCTGGCCTTCCCCTCCCCCTGCCCCTGCACCTGTCCCTCTCCAAAGACGATGCAAAGACGGGAGACAGCTCGTCTTCGTCTGCCTCGAGCGGAGGAAGCAGGAGGAAGAAAGCAATGGCGGGCTACCTGCCCCAGAGGAAAGCGGAGAGCAGTGGTCACAGCCATAGCAGTAGCAGTGTGGTTAACTGCCATAACAGCAGCTCGAGTGGGCACAGTCAGAGCTCCTCATCGGGCCTCGTGGGAGGAGGATCTGGGGGTGTTAGGATAAGTGGCATTGCAAGCGAGCCATCGCATTCCTCTATCCTCTCACCGTCCTCGCAGCAACAGCAGTCATCCTCCACCATCTCATCCTCTTCGTCTGGCCCCCCTTCCTCAagctccacctctgtgctcGTAGCCAACCGTAACCAACAGTTGTCCAAATCCCAAGACAGTAACTGTTCCTCTGGCCAGCCCGAACCAGAACCCCTTTACCACTGCGGTGAATGTGGCAAAACCTTCACCCACCTCTCCAGTCTCCGAAGGCATCTCCGCAGCCACGGCTTGCCACCAGAAAGCCAAAACAGGAAGTCGGACGGAAACTCCCCCAGCCCAGAGAGGATATTCTGCTGTGGCGAGTGTGGGAAGAGGTTCAAAAAGAGAGGTCACCTCATCCAGCACAGTGTCACCCACTCAGAAAACCGGCCTTTTGCCTGCAACATCTGCCAGAAGTCCTTCAACCGCCGCGAGTCCCTTACGAGACACGAGAAGATTCACGACGAGAAGCCTTTCCGCTGCCCGGCTTGCGGGCGTTGCTTCCGCGAGAGCACCTCTCTCCTCAACCACGCCGCGTCAGGTGCCTGTGGCAAACCTCCGCGGAGCTCAAAGAACCGGGCCGGCGGCGGCGGCAGGAGTGGATCGTCCAACCCGAACGGCAGTAAAATGGGAAGCAGCGGAGACCGGGTGGGAATCCCAAACGATGGGGCAGCAATGGCTAATGACAAGTATGCAACCGATTATTCCAGAAATCGCTACCAGAATCAGTCCTACAGCAGCGGAGTCGATGACTACAGGCGATCGCAATCCTCGTCCCTGTACTCCTCAGAGAGCACGCTAGCCGGTGATATGACCAATCAAACTCTGCGTAAGGCCCCTTTAGCCCCAACTCTTCATCCCCACCCACAGAGCCAGcaaccgcagcagcagcagcaccaccacCAACAGCCACAGCAGCCAcacctccccctctcctccctatTGGATGATTCGGAGGATGAGGTCACCAGCAGTGCAATGTCGGCCATTGCCGCTGCCGCCGCAGCCTCATGTGACATAAACTCAGAAGGccgggaaggagagaggagggatatCATCGGAGGCCTGCTGGGGGGGTTGGGGTTTGGTAACCTGGGCGGACCGTCCTCCACGTCCAGCCTCAACGGTTCCACCATGCCCCTGACCCACCCGAGCCACCCCCACACGAAGCCCCGCAGGCCGAGGAAGCCCAGAGAAAAGCGGGACCCCAGCACCATCGTCAGGAGACGAAGGAGCCCTGCGCCGCCGGGGGACGGGTCGGAGAGGCCGTACAGCTGTCAGATTTGTTGCAAACGCTTCAGGAGGGCGGAGACCCTGCGGCGCCACAACCGCGTTCACACGGGGGAGAAGCCTCACCCCTGCGACGTCTGTGGCAAACTGTTCCGGGAGCCGTTCCACCTCACCAAGCACCTGACCGTGCACTCTGGTCAAAAGAACTACAAATGCAATCTGTGCGGGAAGATGTTCGCCTACGCACAGAGCCTAGTGAGACACGGGAAGTTGCACAGAAAAGGTGAGATCGACAGCCAGGGGAGGAGGGTTAAAGGCGCCGCCGCAGCGGCAGCGGCCGCCGCCGCAGCCGCCGCCATCAGTCAAGGCGCCGCCCCGGGGAACTCTGACTACTTCTCATCCTGCTCCCAAGGAGAGAAGTCTCCGACATCTGGCACCCCCTCTCAGAGGCTTTATACCTGTACGGTGTGCTGGAAATCGTTCCGCCACTATTTCCACCTGACGGCACACCAACAGACTGTCCACGGTGGCGGCGTGGGGCTGGAGAAGTCCTTTCGGTGTGAAGTATGCGGTAAAGCCTTTGCCTACTCCAACAGCTTGGTGCGCCACAAGCTGTCGCAGCACGGCCTCGACCGCAGTGGCCAGCGCATCAACCAGTCCCAACCCTCGGGGTACCCTGCGCTCTTCTATGACTCTGGGTCGGGTTCAAACTACGCAGCGTCGTCTCACATGCAGCAAGGGGCCTCCGGCTCGCAACCGCAGcaaccgcagcagcagcagcagcagcacccttTTCACTACCGCTCAAAAAACTTCCAAAAGCAGCATGgacaaacaaaaaagcaaaggaaaaaaaaaaggcgagtGCTGATCCACAGCATCATGAGAGATGGGAAGCTGGTGGGTGTCCCTCTGAGCAAAGACACCCGCCGGAAGCTGTTGGttctgaggaagaggaggggccgACTGCAGGCGCAGCTCAAGAAGAAGCTGCTCCTGGCCCAGCTGAGGATGAAGGGCGGCATGACGCGAGCCAAGTCGTGGTACGGCGGGGCCGTCAAAGTCACCGGCCTGACCTCGATGGACTTCCCCATCAAGCGCTTCCCCTGTCCCATCTGCCCCAGCACCACGTACGCCAAGCAGGGTTCTCTGCTGGTGCACCACGCCACCCGGCACCCGCCGAGAAACTCAGGGCGCCACACCCGTCTGCGGTGCCAGGTGTGTGGCAAGCGCACCAGCTCCCTCCACAAAGCCTTGAAACACCGGGGCCAGCATCTTAAACAAGCGGCTTTCCAGTGCCGCAAATGCCGACACCGTTTCTGGAACTCGCAGCTCCTGGCGCGCCACGCGTTCTGCTGCCGGGGCGGGGTGATGACCGGTGGCAACTGGGAACTGATGAAGACGAAATCGCCGCCGTCGGAGGCGGACCATTCACCAGTGGAGCTTACGGTCCCAGTTGTTGAGCTAACGCCCCAAGTTGCCGAGCTAGCGGTCCCGGTTGTGGTCCAGCCCGAGAGATCAACAGTTCTGACGGAGTTCAgtcagtaaaacaaaaaaaacaaacaaaaaaaaaaaaatttttctaGACTAGATTgttttgatgtttgtttttttattttttaaataatccaaGAAGCAAGCAAGAGCTGGCGAGTTTTTAACAGAAGGTGGGAGAATGTGGAGGGTTTAGTGTAACTAGCATAATGTCTCCACACCCCTACGGGATATATCTCTATACAATCCTCATTTACTGCAGCAGAGGTGGTTGATACATTAGAGTGGACTTCAAAAGCCCCAAAATCAGAACCAGCCTCCTCATCTGTCCCACCTGAGGTGGAGGAACTCTGGACCATGTGACAATTTTAGTAGCACCCgtttgaagagagagagagagagagagaaaagaaaataaataaataaacatcaaTCCAGTTTTCTTTTCACcatcagtttttattttattttgaaatttccCACTAGCAGTGTTTGCGCATAATACGGATTGTAGAAGTGAGGTACCTTTTTAGTACcagtttattttttcaaatagtTTTCACATTATTCACAGTTAAACCGTATAGTCCGTGTCTCTTgctctgtatgtgtttttatctGTTTACCCCCAGTGGAGaatctctcccttttttttttttttttttttatatactgagATGACATCTGCCCTCCAAGATAAATGAATTTTTTTTAGGAAGAAACAAAGAAATCCTAAAGAACCTCATTATATAAACAGTAAAAGGGTGGTATTGGTCGCAAAAGGCcataaaacaaataaagtgactgaaaaagcaaaaagaaaaaccgGAGTTAGAAGTGTTGGTGACCTTGTTTTTAATGTACActactttttgtcatttttttaaagaggcgTGGATGGCGAGAAAACGCGACTCAAACTGTTAACGTGTTCAGGATTTGAAAAGGACAACCGAAATAACCGGAGTGTACTGTACAATtcgtattatattttattatatattgattcttttgctgttttttacTCCAAGTAtccttttcttttattctcgTTGGTATTGTAtgggtgggagggagggagcgagTTGGGGACTATCTTTGTAAAACAGCGGGATGAGTATATGTATCgatgtgatattttttttttttccctccctgtTCCCCTTCTGCCTACTCCCTCATTGCCACGGTTATGTCCAAATTTTGTAACAAAAGCGTGTACACCTAGTTCATTACTTAGGTCCTGTCCAGacgtgttttttcttttttctgtaaaACTAAAACATGTAATATTATTACTAAATTACTATCCTTTTCTTTGCCTAAAAGTGAGTTGTTGAAAAccctcaaataaaaaaactgaaatggtA

Function

NR:

description
PREDICTED: probable GPI-anchored adhesin-like protein PGA55

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820539.1 True 6591 mRNA 0.54 3 29140196 29153709

Neighbor

gene id symbol gene type direction distance location
shisa7b LOC103366046 coding upstream 5418 29083468 ~ 29134778 (+)
LOC120571363 LOC108242649,LOC103366044,LOC102789049 coding upstream 121610 29009106 ~ 29018586 (+)
LOC120571347 NA coding upstream 143658 28967102 ~ 28996538 (+)
LOC120571351 NA coding upstream 174502 28945398 ~ 28965694 (+)
LOC120571349 NA coding upstream 198168 28928328 ~ 28942028 (+)
grin2da LOC108242688,LOC102307452,LOC101474831,LOC102206987,LOC103360328 coding downstream 281019 29434728 ~ 29611496 (+)
cacng7a LOC100708651,LOC101075242,LOC101474381,LOC101173155,LOC103370323 coding downstream 516898 29670607 ~ 29719335 (+)
LOC120570814 cacng8,LOC108242680,LOC106519608,LOC104958027,LOC101473306,LOC100708375 coding downstream 579204 29732913 ~ 29755907 (+)
LOC120571183 LOC103370324,LOC102309436,LOC102214173 coding downstream 664957 29818666 ~ 29832361 (+)
LOC120570845 NA coding downstream 735164 29888873 ~ 29912482 (+)
G137278 NA non-coding upstream 137256 28947496 ~ 29002940 (+)
G137268 NA non-coding upstream 145628 28867996 ~ 28994568 (+)
G137389 NA non-coding downstream 117866 29271575 ~ 29271784 (+)
G137391 NA non-coding downstream 126180 29279889 ~ 29280718 (+)
LOC120572017 NA non-coding downstream 181069 29334778 ~ 29338629 (+)
LOC120572018 NA non-coding downstream 186309 29340018 ~ 29342330 (+)
G137485 NA non-coding downstream 642223 29795932 ~ 29796492 (+)
LOC120571364 LOC100710000,LOC101476588,LOC102306017,LOC102215018,LOC103366045 other upstream 78835 29020235 ~ 29061361 (+)
G137239 NA other upstream 273520 28864142 ~ 28866676 (+)
LOC120570924 NA other upstream 286668 28846607 ~ 28853528 (+)
LOC120571342 LOC102209207,LOC103366041,LOC100710525,LOC101479869,LOC102301554 other upstream 351635 28775212 ~ 28788561 (+)
tmem238a LOC104924380,LOC101076585,LOC104965079 other upstream 607951 28529640 ~ 28532245 (+)
LOC120570925 LOC102307141,LOC101475123,LOC103366049,LOC102237376,LOC103146430,LOC107394395,LOC108242668,LOC102779594 other downstream 9298 29163007 ~ 29201025 (+)
LOC120571184 LOC104962268 other downstream 679734 29833443 ~ 29848210 (+)
LOC120571185 LOC105025867,LOC101068015,LOC100697091,LOC104962269 other downstream 696094 29849803 ~ 29855470 (+)
LOC120571186 LOC104962270,LOC108242670,LOC106519599,LOC101074355,LOC102221922 other downstream 703932 29857641 ~ 29887146 (+)
G137551 NA other downstream 997910 30151619 ~ 30155115 (+)

Expression


Co-expression Network